SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26258_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_nuclear_hormone_receptor_family_member_nhr-8-like_[Amyelois_transitella]
Ontology
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0004879 F nuclear receptor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0008270 F zinc ion binding
GO:0010906 P regulation of glucose metabolic process
GO:0030522 P intracellular receptor signaling pathway
GO:0042594 P response to starvation
GO:0042632 P cholesterol homeostasis
GO:0043401 P steroid hormone mediated signaling pathway
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
GO:0070328 P triglyceride homeostasis
GO:0070873 P regulation of glycogen metabolic process
Transcript
Level		FPKM:8.68 TPM:7.31
ORF EntryO_TrvaMG11995_complete:A_TrvaMG_comp26258_c0_seq2
Sequence
(Nucleotide)
TTTTACTTAAAAATAAAATAACATTACCATAGAGTAGTTTAAAAAATATAGAAACCTTAA
TTTAAAAATTTATAAAAAACTTCAATCACAACTAGTAACCAGCCTAGTCAATAATTTAAT
CATATTATTTACAATTTCATCACGTGATTAAAAATTTTAACTCAACAATTTTAATGTCCA
ATTTTTATGACATTTTAATATTAAAAACCTGTAAATTAAGTTACAGAACATTGTCATTCT
CGTCCGCCATGATGTTTTAGGTCGAAAATCTCCATCAAAAGCGGTTCAAGTGGGTTAACG
TCTAGGTATACGTCGGTTATTTCTTCGGCTAGTTTTCGTAGTTCTAGTACTTTTTGTATG
AGTTTTAGAAACGTGGATTTCGCTTCACATCCTGGATACACGCTCTCTAAGTACCGTCGT
AGTAGATAGTAGTAGGAATTCTGCTCCAGCTTGACGACGTCCCGGTGCACGAGGCGCGGG
CGGTGCGGCGCGAACAGCAAGATGGCGGACAGGATGAGTATGACGCTCTCGTCGGTCCGC
CACCTCGCCGCGAAGGTGCTGATGAAGGCCTCGTGTGAGCGGTAGATGTCGCCCTTGGCT
AGCTTCAGGACATCCGTACCTATGCTGCCGAACTCTTCTTGGCAGTGCGGGATCTTCCAC
TGGTTCCTCTGTCCGTCGTAGGTCATGGTACTCCGCAGCACCATCATCTCTATACAGCCG
CCTTTCAACAGAGCTACCTGGTCTTCTTCGCACATGTTCTTGAAGGCGCTGATCTTCTTG
GCTATCTTGATGAGTCTCCGGATAGCTACGGCGGTGAGGTTAACCAGTCTGATCAGTCGA
GGGTCGTGTTTACCCCCGCTTTCCGCGGCGGAGTCCACTAGTTGTGATATGTCGTCATCG
ATGGGAGCGTTCAGAGCCTTGTTGGCCACTATTAACTCGTTCAACTTGGCTCGCTCTACC
TCGTTAAGTTCTCTCGAGGAGCCGCTACATGAATTAACAGAAGCATACGACTCGAATTCC
AACTTGATCGCCTCACACAGTATTGACTCCATTGAGTTTGGCTCGATTCTTTCAACATCC
TGTAGAATATCCCTAGCCTTGTTGACGTCAGGGTCGGTGCTGGTGGACGGTATCTCCTCA
CAAACATGCTGATCCTTCATCTCTCTGAACGAAGCCGCTGTGTCTCCATTTGTTAATATT
TGTCTTATACTATTTTGTTTGGGAGCCTCCATATAAGTATTACTGTCAACGTTATCATAC
ATTTTGTACGAGTCCATCATTCGTTGTTCGTACAACGCCTGGTTCATGATATGCTTCTCA
TCAATAGGGTACACCTTCATATTATAATCTGGTTGAACAGGAGGTATTGGAGCGTAATTG
TACACCGGAGAGTTTATAGATGACTCCAAGTCATTGTTGAGAGGAGACTGGACGGTACTG
CTTGGACTACATGTAGTACTATTTAAAACATCGTACTGTATTGAATCTGGTGTACAGTTA
AAGTGGCTTTCGTCATCTTTTTTCATACTTTTGGAACTGGAGACAGAATCCTCACCATCG
CTCTTTCTCTTTCTCGCTCTGTTCTCTTCTATCTTCCGTCTCTTTTCAGCCTTGTCTTCT
TCAGACATTATGAACTCCTTCACCATACCGACAGCAAAACACTTCTCTAAGCGACATTTC
TGACAGAATCTCCTCGTGACCACGGTTATAACACAGTTGTTCGTGAATGGACACTTAAAC
TCTTTGCTGGCTAAAGCATTTCTGCGGAAAAACGCTTTACAACTCTCACACGAAATAGCG
TTAAAATTGTAACCTAACGCCTTATCTCCACACACTAAACATATTTTCTGTAAATTGGGC
GGTAGTTCCTTCTTCTGAGTACCACTTTCTTCTTTAGTTTCACTGTTATTGTCCATTTTA
ACAGATAAACAATATTATTGTTAACATAAACTGACTTTTGACCTCGCCCTCAGAATATTC
CCGATTTTAATAATTCTCGAACCGTGGAGCTCATTACGAAAATTAGATAATAATCG
(2036 bp)

- SilkBase 1999-2023 -