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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26250_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_cleavage_and_polyadenylation_specificity_factor_subunit_CG7185_isoform_X2_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005849 C mRNA cleavage factor complex
GO:0006379 P mRNA cleavage
GO:0006397 P mRNA processing
Transcript
Level		FPKM:9.45 TPM:7.95
ORF EntryO_TrvaMG11977_5prime_partial:A_TrvaMG_comp26250_c0_seq2
Sequence
(Nucleotide)
CAATGAGATTTTTCTAAGTGTATTGTAATACAGATTGTATTGCTTTTCTCGAAACAACAA
ATATTTGTTGAAAATAAGGCCTAAACCTTTTAATCATATTATTGTTTATTTTGGTTTGTT
TGATATATTAAATTTTAAATTAACATGGCTTTAAAGAATAACAATACATGTATTCCAAAT
GCAAATAAATGATAAATTTATGTTGTTGAACTAAAATTTATTAAAACAAATATAAAATGT
AGTACACAATCAAATGAAATGTTTCTGCACAATTTCATTTGGTTGTTATTGAGTTGCCAT
CTGAACAAAGTCATGAAACTACGATTGGACACAGTTTTAGTTCAATAAATTAGTATGCAA
GTAAAACTTGAGACTATTACTTGTGCCAAGTTTGTGGCAGTAGCCAAAAGTTGTGTAAAG
TTAGTTTTAAAACTTTTTTGTTTACATTTTATCATCATCTCATATATTACAGATGCATTT
TTGCTCAAAATTTAATATTTTAATATAAAACAAACATTTACAAAAATAGGTTTCTTTAAA
CTAGCATTCAAAATTTAACAGACAAAATGATTTTCAAGTTACTTTTAAACAAATCAATGA
TACTGATAAAACTGTACACATGTGCCTCAGTTGCACAGTATAGCAAAATTTGACATAGAC
TAGTGGTTAAAATGTTTACATACATAAATCGAGCATAAAGGTATTTAAAAGGATTTTCGA
ATTAAACAAGATATATTTTAAAATTATTAAGATATAGATTTGGAGAATACACTATATTAT
GTTATTTCCTATAATTTACTTTTAACTATTTACAATGGAATTATATTTCATACCGCTATC
GTAAGCTTTGGCTACGCCGCTACACACTAATTAAGTATTCAGATTCATGTTAACTTTAAA
TTAAGAAGCTAAAACAATTAGTAGACAAGTGCCTTACAAAACATCAAACGAACGATCAAA
AACGTTTAACAACGCTCAAAATTAGTTACATGTGCTATTTTTATCGTGATGAGACGCCTA
ATAAATTACCTATGCAAATCGATATTTTTATAAAATTCCTAACACTCAGATGACAACCCA
AGAGATATCCGTTTTTCAGTACAACGCAAAAACTGATATCGTACTTATATTTACAGGATA
ATCTAAGACAAAAGTGTACGAACCCAAGTTAGGTTGCCGACGTAAAGTTGAAATCGGCGG
CCATGATGTCCGTGAGGCGGGCCGTGATATGCGCCGTTACCGTTTGTCTCCTCCGGTGGG
TGCTGATTAGATGTGATGATGGGAGGGCCGTCACCATCCTCGGGCTTCGAAGCCGGTGCT
GAGATCACGTCGTCATATAAATCCACGTTCTCGCCTCCAAATTCGTCCTGTCGATTAAAG
TCCGATTCTATGTCGTCGGCGTACAAATCTATATCAACGTCGCCGTCCGCCATTTTACGA
AGCGCGAAGTTGAATGTTGG
(1460 bp)

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