SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26244_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_pyruvate_carboxylase,_mitochondrial_isoform_X1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003824 F catalytic activity
GO:0004075 F biotin carboxylase activity
GO:0004736 F pyruvate carboxylase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0005829 C cytosol
GO:0006090 P pyruvate metabolic process
GO:0006094 P gluconeogenesis
GO:0006107 P oxaloacetate metabolic process
GO:0006629 P lipid metabolic process
GO:0006768 P biotin metabolic process
GO:0008152 P metabolic process
GO:0009374 F biotin binding
GO:0010629 P negative regulation of gene expression
GO:0016874 F ligase activity
GO:0019074 P viral RNA genome packaging
GO:0031406 F carboxylic acid binding
GO:0044791 P obsolete positive regulation by host of viral release from host cell
GO:0044794 P positive regulation by host of viral process
GO:0046872 F metal ion binding
Transcript
Level		FPKM:1.08 TPM:0.91
ORF EntryO_TrvaMG11947_complete:A_TrvaMG_comp26244_c0_seq1
Sequence
(Nucleotide)
TTCGAAGTGTTTTTTGAAGCAAATTCTGGCAAAAAAACGTGTGTATACTTCTCACTTGAC
ATTGGCGAATCATCCCGGGGATGAGTCCATAATCAAAAAGAGAAGAAGAAGAAGACAGTT
CTGTCAATTAGTGTCAATGTAATACAATTTCTCGTTGTAGTTTAAAGTGTGAAAGAGGCT
GATTGTTTTTATCTTTGAAACACGAACTTTCAGATCTAGATTTAGACGAACCAACGAAAC
GACACGAAACGAAAAAAAAACACGTAAATCTAGTCAAATTTTAAAATCCAGTTCATAAAT
AACTAAAAATGAAATAAACTGTGTTATTAGTTTTAAATAATCGTTAAGTTTGTACTTATA
TAGTTTTCTTTTGTTTTTTTCATTTATTTAGTTTTGTTTTTGTAATAAGAATGCAAATAT
TAAAGGCGAGGTTCGCGTTGCGCGCCACGGCTTCGCAATTCCAAGCATGGAGCGCTGCCA
AAACCCGTACAGCCGCAACGGACTCGAAGATAGTAGAATACAAGCCGATACGAAGCGTTC
TTGTTGCCAATCGTGGAGAGATCGCTATACGTGTCTTCCGAGCATGTACGGAACTGGGGA
TCCGTTCTGTCGCCATCTACAGCGAACAGGACAAACTTCAGATGCACAGACAAAAAGCCG
ACGAATCATACTTAGTAGGCAAAGGTCTTCCCCCGGTTGAGGCCTACCTCAGCATTCCGG
AAATCATCAGGGTAGCCAAGGAGAATGACGTTGATGCCGTACATCCTGGCTACGGACTTC
TCTCGGAAAGGTCAGATTTCGCCCAAGCCATCATCAGCGCTGGTCTGCGTTTCATTGGTC
CCTCGCCGAAGGTCGTGCAGCAGATGGGAGACAAGGTCGCCGCCAGAAAAGCAGCTATTG
AAGCAAAGGTTCCCATTGTCCCCGGTACTGATGGTCCAGTCACAACAAAGGAAGAGGCTG
TAGAGTTTTGCAAAAAACACGGTCTTCCTGTTATACTAAAGGCTGCGTATGGTGGTGGCG
GTCGTGGAATGCGGGTAGTTCGTGAAATGTCAGAAGTGGCTTCAGCCTTCGAACGCGCTT
CTTCTGAAGCTCTCGGCGCTTTCGGAAACGGATCCATGTTTATTGAGAGATTTATAGAAC
GACCCAGACATATCGAAGTACAGTTGTTAGGTGACAAAGCGGGCAACGTGGTACATTTGT
ATGAAAGAGATTGTTCTGTTCAGAGAAGACATCAGAAAGTTGTTGAAATTGCTCCTGCAC
CGAAATTAGACCCCGCGATTCGTAAGGAAATGACAGACTGCGCCGTACATCTGGCTCGTC
ACGTCGGATATGAGAACGCCGGCACTGTCGAGTTCTTGCTCGACGATACAGGAAACTTCT
ACTTTATAGAAGTTAACGCTAGATTACAAGTAGAACACACAATCACAGAAGAAGTAACTG
GCATAGACTTAGTACAATCTCAGATTCGTATCGCCGAAGGAATGACTCTGCCCGAGCTAG
GGCTGACACAAGACAAGATCTCGGCTGAAGGATACGCCATACAGTGCAGAGTCACCACCG
AGGACCCCGCTAACAACTTCCAACCCAGCACTGGAAGAATTGAAGTGTTCAGGTCCGGTG
AAGGCATGGGTATTCGTCTTGATTCAGCGTCAACGTACGCCGGAGCCGTTATCTCGCCAT
ACTACGACTCATTGCTCGTCAAAGTAATATCACACGCTCACGATCTGCCGTCGTCCGCCG
CTAAAATGAACAGGGCTCTCCGCGAGTTCCGTATCCGCGGCGTCAAAACAAACATTCCAT
TCTTGCTCAATGTACTCGAAAATCAGAAATTCTTGAACGGTGCCGTCGACACCTACTTCA
TCGACGAACACCCCCAACTGTTCATGTTCAAGCCATCACAGAACAGAGCTCAAAAGATCC
TGAACTACCTCGGATATGTCCTTGTAAATGGACCGGCTACACCACTGGCCACCAACATTC
CACCGTCAGACGTTAAACCTTATATACCTGCAGTGCCGTTAGACCTTTCACCAGAGGCTA
TTAAAAGACAAGAAATTACTGGAGAAAATACAGCCGTTCAGCCTCCCAAAGGCTACAAAC
AGATCCTCGACGAAGGAGGTCCGGAAGCCTTCGCCAAAGCGGTCAGACAACACAAAGGCC
TGCTTCTAATGGACACGACCTTCAGAGATGCCCATCAATCTTTACTGGCTACCAGAGTTA
GGACTCATGATCTATTGGCTGTCTCGCCTTACGTCGCTCATAATTTTAATAATTTGTATT
CGTTGGAGAACTGGGGAGGAGCTACTTTCGATGTTGCTCTTAGGTTCCTTCACGAATGTC
CTTGGGAGCGTCTCCGCGACATGAGACAGCTGATCCCGAACATTCCCTTCCAAATGTTAC
TGAGAGGAGCCAACGCGGTCGGCTACACCAACTACCCGGACAACGTCGTGTTTAAATTCT
GCGATATGGCTGTCCAAGCTGGAATGGACATCTTCAGAGTATTCGACTCACTAAACTACC
TGCCCAACCTCATCCTGGGTATGGAGGCAGCAGCCAAGGCAGGAGGAGTCGTAGAAGCAG
CCATCTCTTACACGGGAGATGTTTCAGACCCGAGCAAGAAGAAATACGACCTCAAATACT
ACACCACGTTGGCGGACGAGTTGGTCAAAGCTGGCACACACGTGTTGGCAATTAAAGACA
TGGCTGGGTTGTTGAAACCACAGGCTGCTAAGTTACTAATCGGCGCGATCCGAGCATCTC
ACCCGCAAGTTCCCATCCACGTGCACACACACGACACGAGCGGGGCGGGCGTGGCGGCCA
TGTTGGCGTGCGCGGAGGCGGGCGCGGACGTGGTGGATGTCGCCGTGGACTCCGTGTCCG
GACTCACGTCGCAGCCCAGCATGGGAGCCTTGGTAGCTTCCTTGCAAGGCACGCCGCTTG
ATACCAAGATACCCCTACAGACAGTGTCGGAGTACTCCGCGTACTGGGAGCAGGCGCGCA
CGCTGTACGGTCCGTTCGAGTGCACGGCCACCATGAAGTCCGGCAACGCGGACGTGTACC
TCAACGAGATCCCGGGAGGACAGTACACTAATCTGCAGTTCCAGGCCTTCTCGTTGGGAC
TGGGGAGCCAGTTTGAGGAGGTTAAGAAGGCTTACAGGGAAGCCAACCTATTACTAGGCG
ACATTATTAAGGTGACTCCATCATCGAAGGTGGTCGGTGATTTGGCCCAGTTCATGGTCC
AGAACAAACTGACTGCGGCCGATATCAACGCGAGAGCTGAAGAGCTTTCCTTCCCTAAGT
CTGTTGTGGAATTCTTGCAGGGAGCCATCGGTATACCTTATAAAGGATTCCCGGAGCCAT
TGAGATCTAAAGTACTGAAAGACATGCCAAGAATCGAAGGTCGTCCCGGACAAGAATTAC
CTTCACTTGACTTCGATAAGTTAAAGAAAGACCTTACAGAATCCTTCCCTGACATCAACG
ACCAAGATGTAATGTCGGCTGCGATGTACCCGCAAGTGGCGAGCGACTTCTTCCGTTTCC
GTGAGAAGTACGGACCGGTCAAACTGTTGGACACCAAGACATTCCTCGTTGGACCTACTG
TCGGAGATTCATTAGAAGTAAAGATCGAACGTGGTAAAACTCTGGACATCAGAACGGTAG
CCGTCTCCGAGGACATGACGGCGGCCGGAGAACGAGAAGTGTTCTTTGAACTCAACGGAC
AACTGCGATCTGTGTTCATCAGGGACGAGAATGCGAGCAAGGAAATGAAAATCCACCCTA
AGGCTGTGAAGGGAGATAAGAATCAAGTCGGTGCGCCCATGCCGGGAACAGTTCTTACAA
TCAAAGTGAAAGAAGGCGACAAGGTCGACAAAGGTCAGCCCATCGCAGTCCTATCTGCTA
TGAAAATGGAAATGATAGTTCAGGCACCCAAAGCCGGTACCATCAAAAACGTGGCCATCA
CCAACGGACAGAAACTTGAAGGAGACGATTTGATCTGCACTATTGAATAAACCATAGACT
ATGGTATTTACTTTTTCAACGTTATACAGCTTATACAGAGTGGATATATACACTTTCCCA
AGTCGTATATGATATTGAAAAAAGTATAACCAATTCCAAAACGAAAAGTATTCCTAAGAG
GTTCCGACAGAAAATTCACTCCACTTTGGCTTGTGGAAGGTTACATATCCATTCTGTATG
TACTGATTATGTTAGACCAGTATGCTATTTGTTTATTTTTTCTGTCATTAACTATTATAA
CAAATTTAAAGTATTAGGTGACTACTAAGTTTTAACAATTACAATTCATGTTTTACTTAT
TCAGTAAAAAGCTTTACTGAAAATTCTATTAACAATTGTAATATCTGCAGTAAGTCATGA
ATTACATTAAACTTGAGTCTAATATAATTAGTTCATACTTGAGAATTAAAAAAAACATAC
TTATAAGAAAATCCAATGCATTATTGTACAATGAAATTTCAAATGAAATATCAACTATAT
CATTCTGATATTTACTTGATCTAATCAATTGTTTTCAATCTCAAAGAGATTATCGAAATA
AAAATCGATTAAATTTGCAATCGCAAACTAAAAAAATTCTATAAAATTTTGTAACTTTGC
ATTCATATTGAATCGAAGTCTTAAAATTAAGTATTATGTTAAATAATTGATGCTTTATCA
ACACAATTAATTTCACAGGAATTAACTTAAAAATTGGTATCAAAAGACATTTTTTATACC
TCACTTAGGTGCTACAATTTCGAGACATCACACACAATGCTTTATTTAAATGACGAAGGA
AAGATGGAATGTACTAATATTTTATATAATTGTACATTTAAAATGGTAACACTTTAGTGT
TGCCTTATTCATGTTTATCACTATTGAATAGTGCAAATTATCACTTTCGTACAAGCGAAA
ATAAACCTTGTTGCACATATTTATAAAGTTTATTATAGAGATTAGTCATTCCATGGAATG
TAACAGGGTATGAATGTAAAGTGGAGAAGTTCTTAAAAAATCTTAGAAATATTTTAGTAA
CTTCTTCACTATGGAATGAGATGTATTCTCCTTTTTTGTTGTCGGTGCTCAGTTGTTATT
TGTTACTCCTTTTGCATAATGTTTTTACTTTATTTAATAAATTTTATTTAAAATTTAAAA
AAAAAAAAGAAAAAAAAAAAAAAAAAA
(5187 bp)

- SilkBase 1999-2023 -