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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26235_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_protein_sel-1_homolog_1_isoform_X2_[Bombyx_mori]
Ontology
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0007219 P Notch signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030970 P retrograde protein transport, ER to cytosol
GO:0034976 P response to endoplasmic reticulum stress
GO:0036503 P ERAD pathway
GO:0036513 C Derlin-1 retrotranslocation complex
Transcript
Level		FPKM:14.79 TPM:12.45
ORF EntryO_TrvaMG11938_complete:A_TrvaMG_comp26235_c0_seq2
Sequence
(Nucleotide)
GCGGAAGGGAGATATTTGACAACCAATATATTGGTTCTTGGTCAAAATTACAGTTTCAAA
CTCAAATATAACAAAGAACACTTGTCGGTATTTACAAAGATTTCAGAAATATATTTACTA
CAATCCAAAGACGTTTAATAAATTAACTCCTTATAAAAATAAAAACAGTTACACTTTGGA
CCGCAGTACATAATCGAACACAATTCTAATCGACTTTTGACATTTTAATATCGATTTTCA
GAATCATAGTCTATACGATTTTGCGATGTTGTAACTTCTTTTGATGTTTTTTGCATTTAA
TCGATGCAAAAATGTATTTAATCGTTTTGAATTTTAATTAAATATCGACGTTTTACTTCC
AAACAACGCCATTACTTAAATCAAACTCGCATTAAACCTTCAATCGAAAATCGATATTAA
AATCGATTAATTAGCCGGCTGCGGTTGCGGCCTCCTCATGTACATGACGACCCCGAGCGC
GCCCAGCAGAGTGGTGATGACGTACAGATCCCAGTTGTAGAGTAACGCCGAGTCATCACC
GGTGATGAAGATCATCGCGAGCGGACTGGAAGCGAGTTCGTTGAAGGCCTGCCTGGCGTG
CAGCGCGGCCAGGGCGAGCGCGGCGGGCAGGCGGGCGTCCTGCGCGGTCTCCGCCGCCAG
GTCGTAGCATCGCTTGGCGAGGTGCGCGTCCTTGGCGAGTCCCAACCCGCGCTCGTGCAT
GTAGCCCAGGTTGAACGTCGCCTGGGCGTTATGGAGCTGTTCTGATGCCATCCTATAATG
GTGCGCCGCGGCCTCCAAGTCCTGTGCGGTCCCGAGTCCGTAGTAGTGGTAGTCGCCGAG
CTTGACGCGGGCCGCGCTGCACCCCTGCGCGGCGGCGCGACCCCACAGCTGCAGGGCGCG
CAGGTAACGCTCCTCGTCAGAGAACAACGTCACATCACCGTTGTCCAGTAAGTAGGCGGC
GTTGGTCTGCGCGACCTCGTACCCCCTCTCCCCGAGCGCGGCGTACTGCAGGAAGGCGGA
GTGGGGGCGGTGCGCGCGCCACGCCCCGTACGCGCCTTGTAACCTCGCGCCCCACGACCC
ACGCTCGCACACGCTCTTGAACAACTCGACAGCCGTGGTGCACGACTTGAGCACGCCGAG
TCCGTGCGCGTGCATGAGCGCGAGCTGATGTAGAGCGAGCACGTTGCCGGACTGCGACGC
GTGCGAGAAGTACTTGTTGGCCTGCTTGAAGTCGCGACGCACGCCGATGCCGCCGAAATA
CATAAATCCTAGGTGCAGTTGTCCTTCAACCCATCCCTGGTTGGCAGCCATTGTGAAATA
TTTAAATGCTGTAGTTGTATCTTTGGGAACGCCTCGACCCTGTAAATACATTAATCCCAT
GCCGCTCTGCCCGACCGGATTGTTCGCTTCGGCCGCTTTCTTGAAGTAGTTGAACGCTGT
ATCATTGTTCGGAATTATACCATCGCCTCCTTCTAAATATATCTTTCCTAGGAAAGCATG
TGCCACAGCGTTTCCTGTTTTGGCGGCCTGCTCGAAGTAATGATACGCCTTGTTGATGTC
CAGGGTCACGCCGCGACCGCCTTGGAAGTGGAGCTGACCTAGACCCACCTGTGCCTGCAC
ATCGCCCTTCTCAGCCAACAGCTGGTAGTATTCTATGAGATCCGTGTCAAGTGCGCCGCC
TCCCCCCTCCACCTCGTCTATAAGCCGCGTGCGATGTATGGCCGGACCGCCGTTCAATGT
CACTTTACTGGCCACTTTAGCAGCGACCTGCATGTACAGGTCCATAGCCTTAGGGCAGGA
GCTCTCCACGGTGTGTCCGCTCCAGTATCGATAGCCTAGCGCCATCTGCGCGTACGAGCT
GTCGCCGACCGCGCCTATAGTGTAGTGGACGATAGCCTTGGCCTGCGACACGGGGACTCC
TATACCGGAGGCGTACATGAAACCTAGGCCCGCATGCGCATCAGCATTGCCTTCAGCCGC
CAACTCTTCAAATATACTTTTGGCTTTTTCAAAATCAATTTCCACTCCTTCTCCATAGAG
GTAGGACCAGGCCATCTTGATTTTAGCTGGTACATAGCCAACTTCCGAGGCTTCTTTGAT
TTGTAGGATTGATGCGTCAACCTCTAGGGTCCTGCGGTTCAGTTTAGCTACTGCTGCATC
GTATAGCTCTTTAGCTTCTTTTAATTCTGGTGTCAATTCCGGCTCCACTTTCTCTGGTAA
AGGTGGTAGACTGTCCAGAATATCTTGTGGATTCTCGTCAGGCATTTTCTCAGTCTCTGT
CAAATCTTTCTGATGTGGCAGCCAAGTGGTTTCGGAGTGTTTCCGTAGGCTTTTTTGTAA
TAATTTCAATGTGTACGCCATTTGCTCTAACTGGGATTCATCTAAGACTTTATCGTCTTT
TAACTCGTTGTTACTGGACTCAGGTACCTCGAAAAGGTGGTTGTTCATTTCCTCAGTTAA
TTTTCTGAAATAATCGGGATCTTTTCTCGCCTTTGATTCAATGGGATCTTCTTCTTCCTC
TTCATTATTTTCTGATTCCTTTTTTGAATCGGGTCCCACTGGTTCACAACACGTTAGCGA
AAAGCACAATAAAAGCACAAATAGTTTGTATCGGTTCATTTTTTGGTTGGAACCAAATAA
CAACAAACACTTACGTGTCCCTTAACTTTATTTGCGGAGTGTTAATTGAACCGGTTTTTA
ATCGTCACGGATTGGCCACTAAGTAATTAACACGTATTTTTACGTAACTTTTATTTTTTG
GTTGTTAAATTTAGAGAAACTCGCAATTTATTGTAAGATAAATATTTTTTGTCGCCTGGA
GAACAGCAGAAAAATAGAAATGCAATTCAGCGACGATCACTTTG
(2864 bp)

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