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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26221_c0_seq3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_RNA-binding_protein_25_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0042981 P regulation of apoptotic process
GO:0044822 F RNA binding
Transcript
Level		FPKM:11.75 TPM:9.89
ORF EntryO_TrvaMG11903_5prime_partial:A_TrvaMG_comp26221_c0_seq3
Sequence
(Nucleotide)
CGCGCCCTCCCCCGCGCCCTCCCCCGCGCGCACCGACACGCCGCCGCACGGCGCCACGTC
TCCGCTCACGATCAGCTTCCGACGGCGCAGTCGCAGCGCGGACCGCACGCCCGCCGGATC
GGAATCTCGCGTCCGTCGACCGCACGCCGCCTTCACACAAGACGATGACGAACCCAACAT
ACGAGAGAAAAAGGACAAAGACAAGGAAAAGGAAAAGAAAAAGAACGCAGACGGAGACAA
CAACAAGGAGAACAAGAGCTCTGAGGAGAAACGGAAACACATAAAGAGCCTCATCGACAA
GATACCCACGCAGAAGGAGCAACTGTTCCAGTACAAGCTCGACACCTCACAGATCGACAA
CACGCTGATGGAGAAGAAGATCCGTCCGTGGATCAACAAGAAGATCATCGAGTACATCGG
GGAGCCGGAGCCCACCCTCGTCGACTTCATCTGCAGCAAGGTGCTCGCCGGCTCCGCGCC
GCAGGGCGTGCTCGACGACGTGCAGATGGTGCTGGACGAGGAGGCGGAGGTGTTCGTGGT
GAAGATGTGGAGACTGCTCATATACGAGCTGGAGGCCAAGCGAGCCGGACTCGCCAAGTG
AACACGCACACACACATATACAGTAGGACAGTGTTGTAATGAAACCTAATACATCCTCAA
CATGTAATTTTTTATCAATCGCTCTGTATTTTGTATAACACAATGAAACTGTACTCTTTT
GTTTAGTTTGTGATGGATATTACTTATTATTTTTATACTCGTAATAAAGTTCCTTAACTG
ATGTATAAAACAATCACTGTGACTTCCATAAATATACGAATATAATAATTTTATAACAAA
ATGTATGTATAGTATAGGTTGTGTTGTGTGTGTCGCGCAGTTTGTGGACGTCGTTATGCA
AAAAGGATTCAATCGCAAAAACAACTTCAAGCTAAAATTTTCCTAGAATCGTGCCAAGAG
TTTCGTCATTTTTAAATTAAATTTTTTGTTTAGTACATTCCATTTGTGAATCTAATTTTA
GCCAAAGTTTATTTCGCTTACTATTATTATGGAATATAAACAGACGAAGAAAGAAGTGAT
AAATTTTAACATTCGTCGAATGAGAAGAGATATTGATCCTTTTTGTGTAAGTCCCGTGTC
TCTTGTAAACTAGTGTTAGTGTTTATATGACATACACGACAGTGCGGGCGGCTCTGCACG
CGGAGGACGCGTGTAACAGCAGTACTGTACACTTGTCAGCAGTACTGCACAATGTCAGCA
ACACTGCATAATTATCAGTCGTGCTGCAAGGCTGTCAGTAATGCTGTGCACTGTGAGGTT
GACGTGTGACGTCACGCGGTCACAGCCCGCACGTGTGTATCTAACATATTGTAATGCGAT
GTCGATTATTGTAAATATTAGATTTAAATAATAAATGTATAAGGAAATAGAAAATATCTT
GTTATTGTTTACGAACGTACTCGTTATATAACGCTTTATATACTTTTATACGTTATTTAT
ACATTTGAATGGGATTCAATACGGTGTGCAGGACTGGTCACTACTGGTACCGATACTATA
CTAAATGACTGGCTCGTGTTATAATTATATTTATGTATTCTGATGACAACGTTAAGTAAT
TATTATGTAATAAATTATCATTATGACATCATTACAAATAGTAATTAATTAAAGAGATAT
ATTCGTGCCCGGTGCAAAATTTAATTTACAAGTTAGATGTAAACAAAATAATGAAGTAAC
TAAAATAATTTCAATTAAAATTCGATGATGACGTTAAAATTATAATTCTATTATTAATGA
TAGAATAATAACGTGTGTGGGTACCAACAACAAATATTTAAAAGTTCATCTATCTTGTCA
TTGACCGGCTAAAATTTTTATAAAATATTATTAATAAATATTCTTTTAGTATATGCATTT
TGTATAACCTCAAAGGGATAAATTGGTTCCGGGTAACAATAATACAAGTGCACACACTAG
TGTCACTAGTGTTGCCCAAATGCAAGAACAAGACGAGACTTAGCCAGTCTTGGTCTTGGT
CTTGCGCCAATACACCTGGTCTTGGTCTTGGTCTTGGTCTTGCAGCAAGAGTCTTGCAAG
TCTTGCAATTACCTATTAGTCTATTACTATTTATTAAAATTTACTTTAAATCTTAGAAAA
AACGTATTGGAATTGAAACATTGTGAGCTTTAATTAACATAGCTATAGTAAAGATCAGGC
AGATTAATAAATAACTGAGGATTTGATAAGAAATTCGACTGACCTTCGACAAATCATATG
TCGTTTTCCATGGAAGTAACTGTTTCTTAATAAACATTTATGATTTATAAGCTTACATTT
GCTAAAACATGTAAAAAACAAATTAATTACAATAACTTGACTTGTATTGTAAAGAAAAAT
ATTTGTCTAGAAAGAGATAGAAACCTCAAATTACATGAAATTTAATAAAAGAGTTTTACG
ATCTATCATTTATTTCAATAATAGTGTCAAATGTTGTGATTTCGGCGCGGTGGCAACGAT
TGTTGTATATTATTATGTTTTCAAAAGAAGCCGCCGGCGCGTGTATCATAACCATGTACT
TCCGAAAAGCGGCAAATTTCTTTGAGAAGTAAGTACAAAACCTTTGATACCGCATTATCA
AAGTGCCGTTAGTTAAAAACTTAAAACATAACTATGCATGCACTCAGTTTGATTTTAATG
GATATCTTTTTATTCGCTGTGTAGGTATGTTTATGGTATTAGTCGCAATGCGCATAGGTC
CAGTGTTTCATATTCTTTGATACAGTTTTTTGCGTTTCATAGAATTCCTAAGCGTACCTA
TACACCGAACTGTCACACCTAACTACTCCGTGAAATAGCGCTAAGTCCTAGCTGCAAGAC
GCAAGAGTCTTGCAGGCTTAGTCTTGTTCTTGCTCAAGTCTTGCACGGTCAGTCTTGGTC
TTGCGTCTTGCAAAAATAACGCGGTCTTGTTCTTGGTCTTGGTCTTGCAAAAACGCAAGA
ACAAGACCAAGACTGCAAGACCAAGACTGAATTTGGGCAACACTAAGTGTCACACACAGT
GTCACACACTAGTGTCACAGTGTCATCATACGGACCAGTTATTAGTTGACAGAAAACATA
GCAATAACTTGATGAGCTGATGTATTGTATTGTGCATGTATTGTGGATGTATGTACGAGG
ATGTGTGAATATGTGCTAGTTAAGTTTAATATTACTACTTAGATGAATAAAATTTGTGAA
AGAAAAA
(3247 bp)

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