SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26215_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_transcription_factor_EB-like_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0001227 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0006461 P protein-containing complex assembly
GO:0007275 P multicellular organism development
GO:0010628 P positive regulation of gene expression
GO:0016925 P protein sumoylation
GO:0030318 P melanocyte differentiation
GO:0042981 P regulation of apoptotic process
GO:0043234 C protein-containing complex
GO:0043473 P pigmentation
GO:0045670 P regulation of osteoclast differentiation
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046983 F protein dimerization activity
GO:0097531 P mast cell migration
GO:2000144 P positive regulation of DNA-templated transcription, initiation
GO:2001141 P regulation of RNA biosynthetic process
Transcript
Level		FPKM:5.11 TPM:4.30
ORF EntryO_TrvaMG11876_complete:A_TrvaMG_comp26215_c0_seq2
Sequence
(Nucleotide)
CCGCGGCGGACGCACGTATGAACCTCGTCCGTTTATCATTACACGTGTTTTTGTGAGTAA
ATATTCAGTGTGCGTCAAATTTAAACGATCGTGCTGTGTTGTTTTTTGGATTGCCAGAGA
AGAGTCGAGGTTTCGTTTCGCATCGTCAGTATTAAAATAGTGATAAAAAGTGAAAGTGAT
AATAGTTTTAATGTACGTAAAGTGATATTACCAATATGTGTTACAAGAACAATGGTTATA
GTTAGTTAAGATGTCAGTGAGGTGACAGAAGGAGTCGGCCTTTTGGCTGGTGTGTGAAGA
CATACGAAAACATTCCTCTACTAAAAATTCTGACCCAGGGCCCAGTGGAAAACAGGAAGG
ATATCTGCAAAATGACCAAGGGCCCTCGGAAGGTGAAGCTAGTCATTGTAGTCAACAATA
AGAAAGACCCGCCTACGTTTAAGACCCTGACGCCGACATCTCGCACACAACTGAAGCAGC
AGTTGATGCGAGAACATGCACAGGAACAGCTGCGAAGAGAATCACAAAACCAAGCTGGAC
AATCCAAAGACAATGAAGAGCTCAAGAAGAAGTCCGCGCCCACGGAGGTTCCACGGATTA
CGCCTCACGTCGAACTACCGCCACAAGTCTTACAGGTTCGAACAGTTCTGGAGAACCCCA
CCAGGTATCACGTGATTCAGAAACAGAAGAGCCAGGTACGACAGTACCTCAGTGAGTCCT
TCCAACCACATACACAGGTGTCGTCAACTCGTGGTGCACCCACGCAGTCAGCACCGGAGC
TCGGTGCCAAGCCACCAGCCTCCCCTGAACGTCCATCCTCGAGTCTACTCAGCCCTGGAA
TGTGCTCTGTCGGCACTAACAATTCAGAGGCGGACGAGTTCCTAGAAGACATATTGTCGT
TAGACAGCGGGGCGGGTCCTTTATCGTCATCGGGGCCGCCTTCAGCAGCCAGCTCAGTGG
CCGGCGACTGCGCTATGCTCTCTGACGCTGACATGCACGCGCTCGCCAAAGATAGACAGA
AGAAAGATAACCACAATATGATCGAACGTCGTCGAAGATTCAACATAAACGACAGAATTA
AAGAACTCGGTACTTTGTTGCCGAAAACGAACGATCCGTTCTACGAAGTCATCAGAGATG
TGAGACCCAACAAAGGAACGATTCTAAAAAGCAGCGTGGACTATATCAAGTGTTTACGAG
ATGAAGTGAACAGACTTAAACAAAGCGAACAAAGGAGGAAACAGATTGAACTGCATAATA
GGAAATTGATGCTTAGGATTCAGGAATTAGAACGTCTGGCCCGCGTGCATGGTCTACCAG
TGTCAGGTGAAGAGAGCTCTCCGCAACGAGCGCTGTCTCCACTACCAGCCGCTCCGCCTG
AAGAACCGCCACCACCTCCGGAGGTGGTGCTTCCGAAGACAGAGCCAGCGCCTCTAATGG
AAATGAACGAGCCTCCTCCAGACTTACTGCGAGATATGCCGTCTACAGAATGTCTGTCAG
CACTTGATGCTTTAGATGGTCTGAAACTAGGCTCATGTTCACCTCTCAGTCGAGACGAAG
GTCTATCGTTAGGCTGTCTAGAACCAGACTTGTGCCTAGATCCAGTTCCAGAAAACCTAT
TTAGTCATAAGGATATCAAGGTAGATTACAAGATGCGTCTGTCTCCGTTACTGGGGCCCG
AGGACAGCAGCGCAACCCTCAATCTCGCTCAAATAGAGGACCTCATGGACGATGACTCAC
ACAATCCGGTCACACAAGGTGATCCGATGTTATGTTCGTCGCCCACTTCGCAGCTGTGTC
TGAGTGACGTGGTGGCGGAGGCAGCTGATCGAAATATATCAGCTATGTTACACGATGATC
ACTCTGGTTTCCCACATAATACCGGGAACTGTTCCCTAATGTCAGAAAACTCTCTCGGCC
TTGGAGGTCTCGGTGCTTTAACAGAGAGTTGCCTTCCAAGTTTCCTCATGGGAGGACCCC
ATCACCATGCCCCACATTCGCCCCATTCCCATCCTCGACAGCACTGCTTCGACATGGACC
TTGGCGCTTGAAGGTGCTAAAACAAAGTGAATATTAAGAATAGTGGTTGTCAACGCCATC
TCTTGGCCGGATTCCTTACTAAACTGTTAACGCCATCTCTTGGTCGGATTCCAAACTAAA
TGTCGGTGCTGCCATCTACGTAAGTGGATTTTTTAAGTCTTCCGTGATGTTCCTTGTGAA
AATAACTTTTTATTGTACTCAACTGGGATCGCCATCAAATTTGGTTTGCTTACTTTTGCC
AAGTGGCTGGAGCCAAAATTGAGCACAGTTC
(2311 bp)

- SilkBase 1999-2023 -