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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26172_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		Retrovirus-related_Pol_polyprotein_from_transposon_TNT_1-94_[Papilio_machaon]
Ontology
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:81.94 TPM:68.98
ORF EntryO_TrvaMG11706_5prime_partial:A_TrvaMG_comp26172_c0_seq1
Sequence
(Nucleotide)
CTGGCCCCTCCAAGTGATTTTACTTCCATGGGTCCGCAGACATCAGAGTGTATCAACTCC
AGTGGTTTCTGTGCTCTAGAACCTTCAGGAGGAAACGGCAACCTGGATTGTTTTCCCTTT
TGACAAAATTCACAAATCATTTTATTTTTATTTACAACTAATTTAACTCCATTAGTACAA
TTACTAAGTTTATTCAAATCATTGAAATTTAAGTGAGCCATCCTCTTGTGCCACAATAAA
ACATCAGTCTCATTCATTTTACAACTGTATGCTGCAATAGTGTCAGTATTTAGCCTGTAC
ATGTTATTGATGAGATTTGCAGCTACTACTTCAGTATTCATTTTGTTGAATATCTTACAG
CCCTGTGTTGTAAACTGTACAGAGCATCCTTTCTTTATAATCTGGCTGACGGACAACAAA
TTAGTTGTTAATTCAGGTACATACAGTACATTAGTAATTTGGATAGTTTGTTTTGAACCA
TTTGTTCCAATAACATTCAAGTCTAACTTGCCACAACTTTTTACCGGTAGCATTTTGTTA
TTTGCTATCTTTATACTTGTGATCGGAGGGGGTACTTCATCGTAGAGCCAATCTTGTCTC
ATTGTAAGATGCATCGAAGCACCTGAATCTATATAGAACCCATTATCATAATATTTAGTT
GTAGCAGAACTAGCGGAGAATACAGCTACATATCCTGTATCTTTATTATTATTTTGTTTT
GCTTTATTTGATTTGCAATTTTTACTTATATGTCCATATCTGTTGCAAACAAAACATCTC
GGGCCTTTCTTTGGGATTTGCTGAAACTGCTTAGAGTTACTTTGCTTTGTGTAAAGTACT
GTAGTATTTAAATCAATAGATTTTACTTCTTGAAGTAATTTTGTTTTGATTAAGTCGGAA
CTAATTTTCACACCTGAGCTTTCGATTCCCATTATCATTGGTCTATAGGATTCCGGTAGA
CCGGCCAACATTAATGTGCCTAGCCACTCATCATCAACATTAAAGTTGATGTTCCTCAGC
TTATGAGCGGAGGACATTATTTTATTGACATATGATTCTACACTTTCACTTGTTTGTAAT
GTTGTGTTAATTAGGTCTTTTAATAGGCCAACTTTTCTAGTTAATCCACTATCTTCAAAT
GCTTGGGTGAGGTTATCCCAAACCTGTTTGGCTGTTTCTGCTTGTTGGATGTGGACATAC
AAGATTGGATCTATTAATAATATTAATTTCGACTTAGCTTTTATGTCATCCTTCGCTGAT
TTTGGATCATTCTGGTCTGGTTCTGATGTTATACAACTGTACAAGTCTTCGTGCTGTAAG
TATGCTTTAACAGCAAAACTCCAAGTGGACCAGTTGTCCCGTCCCATCAGTTTGGGAATT
GACATTGTTGTGTTGTTCATGTTGAAGCAAATCTGAAATAGCTGAAAAACAGAGAGAACT
CGCGAACCGGTAACTTTTTGAGGTTATGACCGCGTGTGTTTCTTTCAAACTATTTTTCAC
TTCAATATTCCGATTATTATATTTATCACAGTCACTAAACAACACGTTAGAGCTATCTGG
GCCCATAACCTGTTGAAATAAAATGAACTGTTAATATTATTTGACTTTTTATTTAACACG
AGGTTACAAATTACAAGTAGTGTGAACAGAGTGACCGAGACATAGACAATTGATCATACA
TAGAGAATGAGTAATTTATGACAAAGACAAACAGAGAAGGCGGCAAATTTAAATTACATT
TTACACACCCACCAAATTAGTGCCTTCTCATATCTAATACAAATTTAACAACTAAACAAT
TATTCACAACAGTACGCTGACAATTTTATTAAAATAATACATAAGAACTACTTAAATTTA
TTTAAAGTTATACCAATTTTATCTTTAAGATATTGAAATCTCACACGAGCAAGTGCTTTT
GTAAATATGTCAGCACACTGTTCTGTAGTACATAGATATTTAACATATATTTCTTTCTCT
TTAAATTTTTCTTGAATAAACTTATACTTTACATCAATGTGTTTACACCTTTTATGAAAG
TCCATATTTTTAATCACTGATATTGCACTTTGATTGTCTACATTTAAACTAATAGTATCT
TGATTATATGCACCAATGTCCAGTAGCAGTCTTTTAATCCATAATGCCTCTTTAGTTGCA
GAACAAGCGGCCATAAATTCTGCTTCAGTCGTAGACAATGCTATGCTTTGCTGTCGCTGA
GTTGCCCATGTTATTGCTGCACCATTCTTTGTAAAAACATAGCCAGTGGTAGATCTTCTT
GTGTCATTGTCAGCTGCATAATCAGAGTCACTATAGCCTTCTACTATATTGTTCTTCATT
TTAGTATACAGTATGCCAATCTCTTTGGTTTCTTTCAAGTACTTAAATATCTTCTTAACA
ACAGCCCAGTGAGTACTATCGTAGCAATCTAGATAGCGACTTACTAAACTTACTCCAAAC
ATAATGTCCGGTCTACTCACAATAGCAAGATGCATGAGTGATCCGACTGCTTCTCTGTAT
GGTATCTTTTCTTCAGGTACCATGCTTTTCTTCTCCAGTTTATTATGAGGATCCACAGGG
ATACTATTTCCATTAGCATTACTCATATTAAATTTATGAAGTAATTTTTCAATGTACAGT
TTTTGATGAATAAAAATATGATCTTTAGACCTTTCTATCTGCATTCCTACATAATTGGTA
GGCTCCATCGTTTTAATTTCAAAATGTTGTTGTAGGTCATTTATAACTTTATTGATAGCA
ACATTATCCTTTGATATTATCAGTCCATCATCAATATATAAAAGAAGATATATTTTTATT
TTATTTACATGACCTGTGAACACACATTGATCAGAATGACTATTAACAAAACCAAATTTA
TTAAGTACAGATTTGAATTTGTTATTCCAACATCGTGGAGCTTGTTTTAAACCATACAAA
GATCTATTCAATTTACAGACATAGTTTGGTGGACATTCTATTCCTTCAGGAGGATTCATG
TATATATTTTCTTGAATATCTCCATATAGAAAAGCTGTTTTTATATCAAACTGTATTATG
TTTAAATCATGTTGACATGCTTCTGAGAGCAGTATTCGTACTGAATCATATCTTACTGTT
GGAGAGAATGTTTCTGTGTAATTTATCTGATACTGTTGGGAACAACCTTTAGCACACAAT
CTGGACTTATATACTTTACCAGAAACATTATTTTTAATGCGAAAAACCCATTTACATCCA
ATTGTTTTTACTCCGGGAGGTTTTTCCACCAGGGTCCATGTTTCATTTTTCTCATGTGCT
TGTAGTTCCTCTTTTATAGATTGTTTCCATTTTTCTTTGTTTATGGATGTTATTGCATCA
TTGTATGTCCGTGGTACATCTGTCCCTAGAAGTTCACAGAGATAAGCGTTATTGTCGTAA
ACTTGTTTTCTAGCTTTAGATCTAGTTGTAACATAATTATCATGTTCAAAATCTACTTCA
GTTTCAGGAACATACAGAGAGTCATCATTAGAATGAAATGAATCATCATTGCCGGAGCTC
ACAGAGATGTCTTTTGATTCGGAACTGTTAGGTGTATTTTCCTGTAACTCTGGGCTTAGC
TTCATCAGCTCATTTTCATTATTTTCATTTTCATTTCCATCCGTAGTTAGGGGCACAACT
ATATGGTTTTGAGTTAATGAATTTTCCATAAAAACAACGTCTCTGCTTATTATTACTTGT
TTTGTTCTTGGATCTAGTAGTTTATAGCCTTTAGTAGTATCACTGTAACCAATAAAAATC
ATTTTGCTTGCCTTAGGATCTAGTTTTTGAAGTTTCTCTCTTGGTATTTTGACCATAGCT
TCACATCCAAATATTTTTAAATGATTTACATCAGGTTTCTTACCTGACCACATCTCCTCA
GGTGTAACATAAGACAGTGCACGGGTAGGGCAGCGGTTGGTAATATAGGCTGCTGTGGAT
ACTGCTTCAGCCCAATAACATTTCTGTAAATCAGAGTTAATTAGCATACAGCGTGCCCTT
TCCATTAGTGTGCGATTCATACGCTCAGCTAAACCATTCTGTTGAGGTGTATATGAGTTA
GAAGTCTGATGGATAATTCCTGACATCTTTAGGTAATTTGAAAATTCATTACTAAGGTAT
TCTCTACCATTATCAGAACGGAGGCATTTAATTTTAAAATCAAGTTGATTCTCAACTAAG
ACTTTATACTCTTTGAATTTTGAAAATACTTCTGACTTGTTATGCAAAAAATATACATAC
ACTTTTCTGGTGAAATCATCAATGAATGTAAGGAAATAC
(4299 bp)

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