SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26168_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_pleckstrin_homology_domain-containing_family_G_member_5_isoform_X1_[Bombyx_mori]
Ontology
GO:0004871 F obsolete signal transducer activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0030027 C lamellipodium
GO:0030054 C cell junction
GO:0030139 C endocytic vesicle
GO:0035023 P regulation of Rho protein signal transduction
GO:0035767 P endothelial cell chemotaxis
GO:0042995 C cell projection
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043542 P endothelial cell migration
GO:0043547 P positive regulation of GTPase activity
GO:0048471 C perinuclear region of cytoplasm
Transcript
Level		FPKM:3.77 TPM:3.17
ORF EntryO_TrvaMG11698_internal:A_TrvaMG_comp26168_c0_seq2
Sequence
(Nucleotide)
AAAAAATCTAGTAGCGTATCTGGTGATCTGTGCGATTACGTTAACAGTAAATCAAATAAC
GTGCAAAATAATGCAGTAGTCCCTGACATCAACACGACACAAACTCCTGTTGAAAGTGCT
AATAATAAAGCTCGTGATCGTAAATTGTCTTTAGATCAAACAATGTTGACCAGACGTGGA
GGTTTCTCACAATCAGAGCTCGATCTACATTCGATCGGCAAGTCACCTTTAGAAAGAAAA
TCTTCGTTCTTCAGAAAGAAAATGGACAGTTTCTTAAAGAATACCACCGAAATATTCAAA
CGACAATCGTTTCAATCGAAAAATTCGAATATCAGCCGAAGGGGGTCAATGTCAGTTTCA
TTACAATCTTTGAATGAGAACTGTGCTACTGGGGATACCTACAATGGGAGGGCCGTTGAA
AAGGGATATCTTCAAGGCAGCAATGTTAGTCTACAATCTTCGCTGACGGCTGGATGCAGT
GCTTCTAGTTTGTCAGCCAGTGATCGACCACCACATGACATGCTATCAGAGGAAAGTCTT
GCCGGTAGCCAGCCAGGGTTGGTCGCCAGCCAACCTTTATACGAACATTCTACGAGCAGC
ATTAACAGTTTAAATGAAGAATGTTTGCAAGACGCACTACTGAACCGCGCTATTTCCATG
AGTTCGGGTCTCGACTCAGCTCACGGACAGGGTCGACGGAAAGCTTCCAGATCTAATAGA
GTTACTTGGCTAGCCAGCGAAGGATTGACTAATTACTTCAGACGAGTCATACAAGATGAA
AAAATCAGGCAATTCGAAAAAATGCAATGTCATTCGTACCAAGATTTCTCGACGATACCC
GAGAACAATTTATACGGGTCCAAAGTTGACTCTAAAGGAAGAAGACTGTCCTACCAACGA
GCGGTGTCCGGTGAAGACCCTTTGCCACCTTCACGGTACCAAGACACGAGTCTGAGAAGA
AAAGTGTTAATACCTGAGTTTTCAGAGGCGAACTTCGAGCTTTCGAGCCTGCTAGCTGAA
TTTACAAAGAATGGTGTACCTCCTCTTAGGGGATTCGCACTTGCAAACATTTGCAATGAG
GCATTGGACTACCTTGTGTGGGCTGAACATCCACCGAACCTCGAAGGGGTTTGCGATACA
AAAAAGCTTACTCTCAATGAGGAATCACGACAGGCCGTTATCAGAGAGCTCGTAAACACA
GAGAGTGTTTACATTCGTCACCTCAAAGCCATCGTAGAGGTGTTTATAGCGGCTGCCCAC
GCTCTTCAAGACATGGGCAAGCTGCTTGAAATGGACACTGAGAAATTGTTCAGTAACATA
CCAGATGTACTGAACGCCAGTCTTCATTTCTGGGAACTCTCGTTTTATCCCATGATCATT
GACGCTGTAGAAAATAATAAGCCATTCAACACCGAACTGCTGTCGCCTGGTTTCTTGCGT
TTCCGTGACTTATTCCATCCATACGAGAAGTATGTGAGCACACAGTCTAAGGCGCTGGAA
TACTACCGCACTCTTACTAACCATCCTGACTTTAATGCCTACATATCGTGGTGCCATTCA
CATAAATCATGCAACCGGCTGCAAATTTCGGATATAATGGTGAAGCCAATGCAGCGCCTC
ACCAAGTACACACTGATCATACGTCGGATCCTAACTCACACCGACATAGAGCCCGAACGC
ACTGCGCTCATGGCTATGGAAACGTTCTCCAAAAACTACGTGGTCGATTTAAACCGCACT
ATACGTCAACGTGAAGAGATAGAGAAGATCGATGCTCTCTCAGCAATGATTGAAACCTAC
GAAGTGGATTTCAAGGATGAAGACTTGGATCGGTGCTTCCGAATGTACGCCAACCTAAAT
CTCAAAGCGCCGATGATTAACTGCATACCCACACAGCAACGCACGCTCATCTTCGAAGGA
GACTTACGCTTCAAGGACGTAGGGAAAGAGATCGAAGTACACGCTATTCTATTAACAGAC
ATGTTGCTAATTTGCAAGAAAGTATGCAAAGGGGGTACTTATTACTATAAAATGATAAGA
CCTAAATACATGATTGACAAAATCATGCCGTTCCCAAAGTACGATCCTCGCATCATCAAG
AACTTGCTCTCGTTGGTATACGTGGTGGTGGACGAGGTCAGCTCGGCTCTCGGCGCTTTC
TCTCTCAGCGAACCATCCAAAGAATCTGGGGCTACCCTCAGACTTTGGGAACAAAAAATA
CGTGAGGCCAGGCTGACCTATGATTTCAGCGTGTGGTTCTGTAAGAACCCGTCTCGGGAT
ATATCTGAATTGGAAGTGGATACCTCCTCGGAATACGCCATGAGCGCCGGAAAGGCTAAG
CAGAACTCCGAGGACCTGAACATTGAACGCGAGGCTCGTGAGCGAGTGGCTGCCATGCTT
CACCGCAACATGGGCACTTCTGTCGATTACGACTTCTCACAGCTGTCTATGAACACAGAC
TCTTTCGATGGTATGGCAAGCGGAGGTCGTCCACACATGCACAGCCTACGCTACCAGATG
CACAGGACCTCGACTGGGAGCTCCAGGAACTCGCGTTTGTCCAGCTTTCAACATTCCATT
AGTGCTCCCTCTCACGACGAGCCTCAGCCGTGCACCAGCAAGTCCGGAATGTACTTGAAG
GCAGGACTCGGGGAACACACTATACCCGCTCTCACCGTGGAAGACGGAGACTCTGACAAA
GGACCATCTACAATAACTAACGTGGCGAGCGAGAGTGAAACCGACACGGTCGTGCTAGGG
GAACTCTCGCCGGTCATCATTCCAGTACCGCAACTGCCCTGCTCGCAGCCGCCGCCGGTG
GTGGTGCTACAACACCCGTCCCCGTACAAGCCGCCGGTCCGCAGCGTGTCCGCGACTCGA
CACACTCTGCGCGTGCAGCCCAAGGCGGGCATCCTCGCTCTCGTACACAGCCTCCCGGAC
TTGACCATCGATCAGCTGGCTAGAGCTCGCGATCGACACTCACACAGTGTGGAACCGCCT
TCTGCATCTCAGAAGTTGTATCAATCGCATCAAGAATTACTTCAGAAGAATCGTCTGTCA
ACTTCACAGCATCAATACCTGACTCCCGACCATCGCAGCACCAGCCAACCTCCTTCCAGC
CCTACCAGTAGGGCGTCGCTGAAGCGTGGTCTCGCTTTCTCGTACTCGTTCAAGAACCCG
CCGCTGCACAAGATGGGACACGTCAACAGCCAATGTCAAGGACAATCCGAACTGACGCCA
TCGACCAGTCAACCGGCTAAGGATATAGATATCGTATGTGAAGCTGCACCGGGGACGAGT
TCAGATAAAGGCGACAAGAAGGGAAAGCAAGTCAGCACCAGAAAAAATAAAGATAAAAAC
AAGGACAAAGACAAGGACAAGGACAAGGATGGTGACAAGGATTCATCTGCGCACGTGACC
GAGGAGAGTAGCGTCGAGTGCACGCCGAGTCGAGCGAGCGTCGCGGCCGCTGCG
(3474 bp)

- SilkBase 1999-2023 -