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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26152_c1_seq2
Scaffold_id
NCBI non-redundant
(nr)		Transformation/transcription_domain-associated_protein_[Papilio_machaon]
Ontology
GO:0000123 C histone acetyltransferase complex
GO:0000812 C Swr1 complex
GO:0003712 F transcription coregulator activity
GO:0003713 F transcription coactivator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005667 C transcription regulator complex
GO:0005794 C Golgi apparatus
GO:0006281 P DNA repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007093 P mitotic cell cycle checkpoint signaling
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016568 P chromatin organization
GO:0016578 P histone deubiquitination
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0030914 C SAGA complex
GO:0033276 C transcription factor TFTC complex
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0043967 P histone H4 acetylation
GO:0043968 P histone H2A acetylation
Transcript
Level		FPKM:1.46 TPM:1.23
ORF EntryO_TrvaMG11634_5prime_partial:A_TrvaMG_comp26152_c1_seq2
Sequence
(Nucleotide)
CATTTTTCTTAAAAATTACAAAATAAACCTAAATGAGATTAAAATTCTCAACAAAACCTT
TAAAGTTCAGTTTTTCTTATTCATAACTTTACAGCCTTCACGCCATACAGGTCGTCTTCA
ATACTAAACTTGAACGAGAAAATTTGTCACAAACGTAAACTTTATCCAACATGTACCTAA
AGCAATAGACAACTCTTCACTGTTTCAGCATGTAATGTTTATAGCCAAGGATGCCAGGCG
GGATCCATGCGGCACAGATTGTCGTGACTGTTGGCAGCGGCGACCAGGGTGGCCACCTTG
CTGTCAGGTCCGTCGAAGGACGCGAGAGAGTTGAGTCGGTTCATGATGACCGTGACGGCC
TTGTTGACCATGTTTATGATGGTTTCGTTGTCCATTTCGACGGGCTTGTTTTCGGCGGAT
GTCCCAGCTGACGGCATACCGGATTTATCTTCTAAACGTTTACGATAGCCCGTGACCATT
TCGTCGCGAAGGATTGTGCGTAGTATTGATTGGATCTTGAAGTTAGGTGTGACAAGGCAT
CTTGCTATGGCGATTGCGGATGCGGTCAGAGGTCCTGTGATACCGATGTTTGTCAACAGT
TCCGATATGTTGGGCGTCAGTCGGAATGGAACAGGTCTGTTTCCGTCAAGCTCTCCCGTC
GTATCGTCCACGTCGAATTTGAAGTACGAGACGTTGAGTAGCCCCGAGTCCTGGTGCACG
TACATCATGTCGGGGTTGAGTCTCGTGAGATGCAGCACGTACTCCGCGAAGCTCGCCAGC
GACAGCTGCAGGGTGAGCATCTTGCGGAACGTCCAGTAGTCGGTGGGAGCGGCGAATGTA
GCCGCCGCCCACTCGCGGACCATGCCTTTCGGGACCATCGTTGCTTGTACCTCGCGCAGT
ATATCCCTAAGTACTTGATGCGAGGCCTGCGAGCCGCGCGCCTGCACGGCCGCCAGTCGC
TCGTAGTAGCGCGCCACGGGAGCGTCGTACTCCACACCTCTGTTTGCGCATTCTGTTCTG
TAAATATCCAAGAGAGATATGGAGCTGGGATTGTCCTCGACGAGTCGCATCTGCGGCGAG
ACGGAGACGACGCGCGGCACGGTGAAGTGCAGGAAGCGGCGCGAGGTCTCCTTCTGCTTG
CCGAGGTAGTGGTTGAGCATGCGCAGCAGCTGCAGGACGCGTTCCTCGCGGCGCGCGTCG
CCGAGCCCGGAGTCGTTGACGACGAGGTAGGGGTATATCTTCCCGTTGTGTCCGCGGATG
TAGAGGCGGCGCGCGGACGTGTTGTGCTTCTGTACGATCTCGACGCGCGGCATGAAGCGC
GCGATGCGGACGTGGTAGTGCGTGTGCTTCGGCAGCAGGAACTCGCCGGGCAACTCGACC
TCGGCCGTTTTTAAACTGAAGTTTGATAGGAATCTGCACTTCTCTTCGATCAGGAACGAT
TTAGGTAAAACCTTAGTTTTGGCTTCAAGTATTTTCACCCACTTCCTCAACTTCTGTATG
AGATTCTGCAACTTCATAGCGTTAGGTTGCGAGAAGTCAAAGTCAGCAGTGAACTGAGTC
TTCATTTTCTGGAAGACGGGATCCTGCACGGTGGCCTGCGCGCGCCGAGCGAGGCTCTCG
GATGCAGTGATGCCGATGCCGATGCCGAAGGTAGAGACGACCTTCTTGATGAAGTTGAGC
GTGTGCGGCGTGACGGTGGCGTCGGCGACGGCCGCGCGGTGGTGGAACGACACCACCAGG
CACTTGGCGAGCCCGGCGCGCAGCTGACGCAGCACCTCCTCGTACCAGTTCTCGCGGAAC
CACACCATCTGATCTACGATCCCCTCTAGCGAGGAGAGCACGGTGGGGTGTATCTCTCTC
TGCAGCTGCATGATCTTGGAGCACCGCCACATGGGCAGCGTGGCGCGGATGGGCCCCGCC
TCGCCGCTCGACGTGCTGGCGCCTTCGTTACTCTTGCTGCCTCCCGCTGAAGTGGTGGGT
TGATGTGGTAGATGCGCGATATTCTCCGCAGTCTTGTGACGCTCTCGCTGTTCGATCTTC
AACGTTAAGTACAACGTTCGGATCGGGAAGTAAACTGCTTGTGGATATAAACGTCCAACA
TGGCTGAGAAGGTTGAGTATAACATTGCCGTCGTATTGTACGAGGCAGGCAAGCAATTGC
GGTATCCATGGCAACCATTGTACTGGTGGAACGCCCACTGAATATTTATCTAAAGCATCG
GCGAGACTATTCTTTTCGTCGTCGAAACTCAGCATCCATAATACCTTAGCACAATATTTC
CTAGACTTGGATTCGTTCTGATGTCGGCAGGCGTGCAGGAAGCACGTCATGGCGGACACG
CCGACGGAGGTCTGTCGCGGGTCGCGGATGAATATCTGCTCCAAGTAGTCGCCCCACAGC
GCCCACGCCTTCACCAACGTGTCGTGCAGCTGAACCGCGGCGGCGAACGCCTTGTTCGCG
TCGTCGGAGCGACCCAACTGCGCTAAAAGCAACCCTTTGAAGGCGTAAAACTCTGCCGTC
ATTTCTTTCGTGAAATATTTGAAATTTGTTGATTCGATCATATCCAATCCTTCCTGTAAT
TCGTCTTTGCCCTCGGTCCACGACATCTGTATGTGACACTTGACCTGTTGCCGTATCTTT
TGGAAACAGTCGACTATCGGTACGCTCGGTATTGTGTAGATTCTGTGCAAGGAATCCAAA
CACACTCCAGATAGATTGTGTTTTCTTGCTATCTTCGCAAAGTGAATGATTGCCTGTGCA
CTGGCATGCACGCCGAGCATGCTGTGGTTGGACGCGTGGTCGGGCTGCGAGTCGTAGTGC
GACGCTATGAACTGGTAGTGGTGTTGTCGCCACGTGAAGATGGCGCCCCAGTGCGACAGC
GGGTCCGCCACTACGGGCAGCCGGTTGCGCCATGTCTTCACTATCGCCTTCATGTCGTGC
AGGGACGTTGGGCGACTGTGTACTAGGCCCGTGTGTATCTGCGCGGCCTCGCTGAGCTCC
ATGAGTTGTTGCGCGGCCCGCAGCAGCGGCAGGTGCGCGTGCGACACGAGGCGCGGCAGA
CGGCGCCACTCGCGGAGACACTGCGCCGCCGCCGCCTCCGCGTGACGCTCCACGCCGCCC
AGCTGCTCCGCGCCGCCCGCGCAGATGCACAGGTAGCCGCGGTACAGGTTCACGACCCAC
GCCAATTCCTTAGGACAGTTGTATTCAACTTCGGCTAATGCTTCTTTCATTGTGGTCCAA
TTGGGGTTGCGCCAAGAGCTTTCCAATATTAAAAATGGATCACGACCACTCCTGCTGAGT
CCCAATTCAAGTAATGAATCCCATTGGTTTAATTCTTTAGCACACTTCAACCAATGTTGA
GTCCAAATAGTACATTCTTTGTGCATATTGTAGGACGATGGGTTTGTTGCGTAGTCTTGC
TTAAGCTTGGCCATGGCGACATCGTATGCTGCTTGTGCTTGTTCAAAGAAACCTTGTTGT
TCATAGGCGATAGCGACGTTAGTTTCACGATACCTCGAGTGTTTCTGCCACAGACCGGAC
CACATGTCCTCTTCTTGTAACAGTTCATACATATCACTGAGAGAATCCAAAATTTCTGTA
GGCGTAGTGACCTCTACGTCATAATCGTATATCTCCACTGGATCTCTTTGAACTCTTCCG
CTGGCCTGTTCGATCGCCATTTGTTCTAG
(3689 bp)

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