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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26130_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC105391048_[Plutella_xylostella]
Ontology
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005737 C cytoplasm
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:3.35 TPM:2.82
ORF EntryO_TrvaMG11472_5prime_partial:A_TrvaMG_comp26130_c0_seq1
Sequence
(Nucleotide)
TTTTTTTTTTTTTTTTTTTTAGGGGTCACCAGTTGTGGCGATGTTGTAGTGGGTATAGGT
AGGTTGCAGAAGAAATTAAGCGGAGAAGCGATGAAACACAGCACAGGATAGGAAACAGTT
TATTAGACTAGAGATAATACAAGCGAACACATAAAGCACAGCACAAGACTAATAACTAGA
CAAAGCGTATTGTTTGCGAGTAGTTACGAGCGGCTCGCGAGTAGTCGTGCGACACGGGCT
TCGCGGTTAGAGTTAGTGTGCAGACTGGCGGGCTCGGGATGCGCCGGCACACGGGTGACG
TGAGCGGTGACGCGAGCCCAAGTGTACGTTTCCATTGTACGATATATATTCCGTATTATA
ATAATATTATATTTTATTATTAAAGTTGTAGTACATATATAATTTATGATTTGTATTCGG
AAGCGGTTTAATATATTATTCTAGTGTTATATGTAGTAAATTAATATGGGTAAATAAATA
ATATGTGTAAATATATATTTATGTGGAAATATATAAGTAAGTAGTATGTACATATATAAA
AGTGTGTGTGTATATGTGTGAGTAGGCTACATCACTCCCCCCCAGAGACCATCACTACGG
GCGATAAAAATCGGGAAAGTGAACAACGCGACCCGATCGCGTCCTTATGACGTCATCCTG
AATTGGATTGTTCCTAACAGGATCAGGGGAGGTGCGGTATTTGATTTGAGGTGAGGATGT
ATGAATGGGGGTAGCCAATGGATCAAGGGTGGGGTCTGATAGTGTGTAGGCCGGTTTTAG
GCGGTCTATAGAAACAGAGACACTTTTCCCTTTGACCAAAATTTTGAAGACATTCTCGCC
GCGTTCCAGTACTTAATAGGGGCCTGAGTACGGTGGCTGCAACGAACCACGTACTGAATC
GTCCCGTAAAAATACGTGACTGGATGAGGTCAGAGCTTTAAAGATAAATATTTTATCTCT
ACTGTGGCAAGCGGCGGGACATGGTCGCAGCTTTGATGTAAAGTGGCGGAGACGAGTGGT
GAAATCCGATATATCCGGAAGATGGGGAACCGTGGCCTGGAAAAATTCGCCAGGTAAACG
CAGCGGTTCGCCATACACCAACTCGGCGGATGACGCGTTAAGGTCATCCTTGAAGGAACT
CCTAATGCCTAACAGCACCAAAGGTAATGAATCTACCCAATTGGAGTCTGCGTGGCACAT
TATGGCTGCCTTTAACTGTCTGTGGAATCGTTCCACCAACCCGTTACATGCTGGATGGTA
CGCAGTAGTTTTGCGATGCTTGAATCCAATCGTTTTTCCAAGGTATTGGAAAAGCGAAGA
TTCAAACTGTCGCCCGCGGTCAGTTACTATATCGGTTGGACATCCAAATCTGGACATCCA
CGATATCAACGCCTTACCAACAGTTTCAGCGGTAATGTCCGCTAAAGGTGTGACTTCGGG
CCAGCGGGTGAAACGATCCACAGCAGTAAAGCAATACCGGTATCCTTGTGACACAGGGAG
TGGTCCGATAATATCCACGTGAATAAAGGTGAAACGTGCACGTGGTAAGTCGAAAGTGCC
AATTGGGGATGACACGTGACGATGTACCTTAGCACGTTGGCATGCTAAGCATTGCCGACA
CCACTCTCGGCAATCTTTGCGCACTCCAGGCCAAACAAACCGTTCTGCGACAAGTTTAGC
AGAAGCGGTAACGCCGGGGTGGCTGAGGCTATGGAGGCTGTCAAAAAGTTGTCTCCTCAA
TGATTTGGGTACAAAAGGTCTTGGGGTAGGGGTGCTGACGTCACAATAAACTTCAAGTTG
AGTGTTCGGAATTCTCAATTTCTCTAGCCGGAGTGAAGATTCCTCTCTCAGGAGTCGAGC
TAACTCCGGGTCAGAAGGTTGTGACGAAGCCAGCACATCTAGGTCGACTGGTACCTGCAG
TTCCGCAACACGTGACAGTGGGTCGGCAACAACGTTGTCTTTCCCTGGAATATGTCTAAT
GTCGGTTGTGAACTGAGATATGAAGTCTAGATGGCGGAACTGACGAGGCGAACAGTTGGC
TTTCCTCTCGCTGAAAGCGTAACTGAGTGGCTTATGGTCAGTAAATACGACGAAGTGCCT
AGCCTCCAGCATATGGCGAAAGTATTTTATACTTTCGTAAATGGCCAACAGTTCGCGGTC
GTACGGGGAGTATTTTTGCTGAGAGGGGCTCAACTTCCGCGAGAAGAAAGCCAAAGGTTC
CCAAGCGTTGCCTTTCGATTGCTGTAGGACTGCACCCAATGCCTGGTCCGAGGCATCTGT
GACCAGAGCAAGTTCGGCCTGACAGTCCGGGTGTGCCAGTAAAGTGGCATTGGCAAGGCT
ATCTTTACACCTTTGAAAGGCCTGGAGGGTGTCACCGGTCAAGTCGACAGGTTGCAAGGA
TTTTACATTTCCTGCTAACAAGGCGTTTAAGGACGCCTGGTGTGAAGCAGAATTAGGCAG
AAATCGCCTATAGAAGTTCATCATCCCTAAGAACCTACGCAATTCTCTTATAGTTTTAGG
GACGGGAAAATCTGCAATCGCTCTTACCTTTGACTCCAAAGGCTTGGTGCCGGATGGAGA
GATTCTATACCCTAGGAAGGTTACCTCAGTCGCGCCGAAGACGCACTTCGATGCATTGAG
AACCACACCGTAATCTCTCATGCGACTGAAAATGGTGCGAAGGTGGGTCTCGTGTTCCGC
TTCGTCTTTGGAGAAAACTAAAAAATCGTCCAAATAGCAGAAACAGAAGTCTAGACCTCG
CGTCATCTCGTCCACGAACCTTTGGAACGTTTGGCCAGCGTTTCGTAACCCGAAGGTCAT
GAAGGGGAATTCAAATAGGCCAAAGGGAGTCGTGATGGCGGTCTTCTGTATGTCAGCCTC
AAAAACGGGGATCTGATTGTAGGCTTTCATCAGATCTATCGTGGAGAAGATAGTACAACC
AGAGATCGCATGTGCGAAGTCATGGATATGCTTGATGGGGTACCGGTCTGGGATAGTCCG
AGCGTTAAGCATGCGGTAGTCACCGCATGGACGCCAGCCGTTATCCTTCTTAGGAGCTAA
GTGTAAGGGAGAAGCCCAGGGACTTTCAGAAGGACGCGCCGTGCCGTTGTTGAGCATGAG
TTCGAATTCCTGCCGAGCAATTTTTAGTTTATCGGGTGCGAGTCTACGAGGGGTACATGA
TATAGGTGGACCTACAGTAGTCCTAATATGATGTACAGTGTTGTGCTTTGGAGTCGTAGG
AGTGCCTGAAGGGCGTAAAAGTTCTGGATATTCATTTAAAAGAACGTGAAAACGCGTGTC
GCCGAATACCGATACTTTTATTGATTCTACTTTAGCATTAGCAAAAGAAGCATCAGCTGA
TAAGCTAGTTGTATTATCAATAAGGCGATGACCTCCACAATCTACTATTAAATTATAAAA
ACTAAGGAAATCAACGCCAATAATAGGTTTGGTTACGTTAGCTACAATAAAGCGCCAAGC
AAAATTGCGTCTTAAGCCTAAATTTAAATTTAAATCAATAAAACCATATGTTTCGATGAT
ACTCCCGTTGGCTGCACCGAGTGTGAAGTTGGTCTTAGCTCGACGATCCCGCAGTGAAGA
ATATGGGTAGACGCACAGGTCACTGCCGGTGTCCACCAGGAACTGTACGTTTGAGCGGCG
GTCCGTGACGAAGAGGCGACCTAGAGAAGAAGGGCAGTCGCTCGTCGCCATTAACGAGCG
CCCTTGGTGTTTTCCGGTTGATAATCGCACGGCTTGATGCATCGATGAGCTTTAGGACCA
AACTTGGCGTGATACCAACAAACAGGGTGTTTTTGGTACCTAGACGAAGATCTGCTTCTC
TGGTGTGGTGAAAAGTGCCGTTGGGGTTGCCTAGAGCGGCTTTGGCTATTGGAGCAGGCG
CGAGTGTGTTCGTCCAGTTTTAAGGTGAGCTGGCGCACCATCCTCTTCAACTCGGCTATC
TCATCAGATTGGTTATGGTCGGAAGCCCTGTGGGACGATGTTGTTGCAACAGCAGGCCGT
GGAGTCAACTCCTGGATGCGGTCGGCCAAGTCAGCCAGCTGCTCCGAAGAATGTGTTGGT
TGAGATGCTAATATGGCCTGTATCTCACGAGGAAGGCGGCTGCTCCATATGGATTGGATG
AAATCTTCTGGGGCAGAAGGTCCAGCGAGGTCCTGAAGGTGTCTAAGGAATTCGGACGGC
CTTCTGTCGCCAAGTTGTTCATGGGTGAGCAACTGTTTCACCTTCTCTTCTTGTGAAGCC
GATAGGCGCTTTATCAATGTCGTTTTAATTTTTGTGTACCTGTCTGTGATAGGAGGTCTA
GCGATGATATCCTTCACGATCTTAGAGTGCTGGATGCCCAGATTTTCGATGACCTTGCGA
TATTTGGTGGAGTCATCGATGACGTCATGGTACTCAAATTGGTCTTCCAGCAGTGCAAAC
CAAAGCTCAGGGTCTTCAGGTGAAAATTCCGGGACCTTGATTTTAATTTTTTTTATGTTC
GACGTATGTCCAATGGAAACGCGCTCTTTTCGCTTCGGCCGTGTAGTGACATGGCAGCCG
TTGCGTGAATCTGCAGTTTTGACCGAATCACTACTATCACTCATTGTTCTACGTGTTC
(4618 bp)

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