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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26129_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_spatacsin_[Bombyx_mori]
Ontology
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005765 C lysosomal membrane
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0007409 P axonogenesis
GO:0008088 P axo-dendritic transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030424 C axon
GO:0030425 C dendrite
GO:0031410 C cytoplasmic vesicle
GO:0045202 C synapse
GO:0048167 P regulation of synaptic plasticity
GO:0048675 P axon extension
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:2.72 TPM:2.29
ORF EntryO_TrvaMG11469_5prime_partial:A_TrvaMG_comp26129_c0_seq1
Sequence
(Nucleotide)
CCACCAAAGAGAGTTCTTGAAACTGTTGGCCAAAGCCGAGTTTGGCAAAGACTTTTTAGT
ACCGTCACCAAATTTCGTCACCCTGTACGAAATTCTACAAATATCTATGGAGACATCTGT
TGTTATAAACGTTTCTAAAATGTTCGATGACGATTTTAAAGAGCATCTCAGTGCTTCCGT
CGACGTTTACATTTCTAATCGTAATTATGACGTCGCTCTTAAAATAGCCAAGTTGTCAGA
CATTTCTATCAATAAAATATTGATCGCGGAATGGACTGACAAATACGAAGCAATTGTACA
AAAACACGAAGGCATGGACGAGAAAGATTTAACACTCTTCATAACAGAGTGTAATGAGGG
TTTTAAAAGAGCTGGCGTCACCTTCATAAACGCCATAGATTTTTTGATGGGACACGCTAC
TAAAATAACCGATCCCATACAAAAATTTTACGCACTCAAAGTCATCATGAATTGGTTCGA
AGAAAATCTAGAATACGGTCGTAAACGCGAAGAAATCGAACACATGATGTGGAGAGCCTA
TTTTAAATGCGATCCCAACAATATTTTCTTGAGTAATTATCAGAACACCTTACATTTCAT
ACTAGCAGGACAGAAAGACAGAAATACGTCCAAGAACGTCGGAGGTATGAACATTGACAA
ACCTTTTTCGATGACGTTAAATGAGATTGAGGTCGAATCAGATGTGGGGAACATTGAAAA
CATGGTTTTATTGGAAGAACCAGAAGCCATTGATAATTGGCGTAAAGTTATATTCCAGCT
TCTAGAATTGAGATTGATTGTCGATGCTTTTCGTTTGTCAGCATTGTTCAAAACTCCCGC
GGAGTACAGATACAGGTCGCCGGCCTGTCCCGTTCAAATCTTGAGATGTAGTTTGAAACT
GGCCGAAGGAACGTGTTCCCCTTACGAACTACCACAAGAATTGAGATTAGTAATATCATC
TCCAGTTCTGCAAAATAAATTGTCGATTTCTGGTGTATCCGACGCGAGTTTCGAGGAGTT
GGTAATAATTCAAGAGAAACAAGTGAACGCTCCTGAAAGTTCGCACCTCGCGGCTCGCGA
AGAAGCCGACCGGCTCTCTGCGTTGGACGCCTTGGCCGTGAGAAGCGGGCTGATGGTGGC
CAAGCAGGTAGCCAGTTACTTCCGGATAGCCCTGCAAATCGGACGGGATTATTTATCGGT
GCTAAAGTATCAAAATAGAGCTCTCGATTTTATAAACTTCGTTAGTGGAAGAGCGAGGTT
GACGCTGGCGAACCTAGTTTTTAGGACTTTTAACATTCCTACTATACAGGTGGCTGAATA
CCTTTGCAGAGAAATGGTGGCAGCGATTATATCACCACATCTAGTAAAAACATCAACTTT
CAGACAAAAAGAGCATTTTCAGTACACACTATGGGGTTACACCATTAATTCCGACATCGA
AATGTTCCTTAACATGAGACCGGACGCTTGTAGCCAAATAGGGCGGCTCATTCTCGATCA
TTTAATGGCGTTCCAGAAGATTTACAAGGCAAATTCTGCGTCGAAAGTTCCAGAAAATGC
TTTGGACGACAGTTGCCTTGATGTCGAGACGTTGATCGATGAGGAGTATCAGAATGTTGA
TGAAGAAGTTGAATCAGTGTTGACCGGTGAAGGTACCATGGTGTCAGCTGAGACTGAGTC
AATGTATTCAGTGTCGACTGTCTACGCGAACGGTAACAAGCTATCGAGAGACTCACGGAG
GAATTTGTTCGATGTCATCACAAGGAACAATGTCCATGTTCGATATGAAGTCAAATCGAA
TATACGGAAAATAACTAAAGGCGCTAAATTGTCTTCGAAGCAGGTGAACATAATATCGAT
AGAGCTGCTAGTGATGGCCCACGAGTGTTTCTCGTGCGCGTGCGACACGGAGGGTGTGGC
CGTGGCGGTGCGGTCCGCACAGGCGCTCACCTCGCGGCTACTGGCGGCGCGCTCCTGGCG
ACTCATGGTGCGCCTGCTCACCGGCCTGGCGCGATACACAGAGTGCGCCTACATATTCCA
GGCATTAAGAGACAATCACCAATTCGAATACCTACTCGGACAGTTCGACTACATGTTGGG
CCAACAGCCGGACAAGATAGCAGAGTTCAAACAAGGGTTACTGGATTTCCTCAAGACACA
TTGTCCCGGAGACACCGACACATACATCATGGTGGCATTACACTTCAACATGCACGCTGA
AGCTGCTGGTGTTAAAAGAAAACAAGCGTTGAACTTGATTGAAGATTTAGAAAAGATGGC
TATAGATGCTGCTAGGTTGGTATCCAAAAAGCCATTCCAACCACCAGCATGGCTTCTTAT
ACACGAGAATCCATCTACAAAACTGCTTCTCGAAACAGCATTGAATCACTGCACAGACGC
CGCTGAATTGTACCTTCAGGGCGGATGCACCGGGTTTGCGGGAGAAATGGCCACGTTAGC
GCAACAGATAGCCTTGCAAATATCGCTATTGAACGCGTCCCCTACTCGACTGATACTGAA
TCGGACTACTGAGAAGACTTATAGACTTGTTAGCGAGTACTTGAGTTTCATGGAAGGCCT
GGTCCTGTTAGCGGGTCGGAGCGGCGAGGCGTGGCGTGAACTCGCTTACAGACGGGCGCT
GTCCAACGACCAGGCATACCTGCGGGACATGGTCGCGTACAGGCCTGATGTAGCTCACGA
TATTATGAACAGATATAAAACAGAGAGAAATAAGACTTCGGTATCACAGGCAGCGATGAC
TGAATTGCGTAATCTCTGTAGATGATATAAGATAAAAATTATTTTGCATGTTTTTATTTG
TCTTTTAAAATAAAAAATATATAAAAAATATGTAAAATTTGTGCGATTGATATAATTG
(2878 bp)

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