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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26114_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_E2/E3_hybrid_ubiquitin-protein_ligase_UBE2O_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006513 P protein monoubiquitination
GO:0006810 P transport
GO:0016567 P protein ubiquitination
GO:0016740 F transferase activity
GO:0030513 P positive regulation of BMP signaling pathway
GO:0031625 F ubiquitin protein ligase binding
GO:0042147 P retrograde transport, endosome to Golgi
GO:0044822 F RNA binding
GO:0061630 F ubiquitin protein ligase activity
GO:0061631 F ubiquitin conjugating enzyme activity
GO:0070534 P protein K63-linked ubiquitination
Transcript
Level		FPKM:2.21 TPM:1.86
ORF EntryO_TrvaMG11407_5prime_partial:A_TrvaMG_comp26114_c0_seq2
Sequence
(Nucleotide)
GGAATATAAAAAAAATAACATGCAATTTTCAAAATTGAAATACTAGATTTATAAATTGTA
TTAAAATACTGAAATTTACTATAAATATTGACAAAATGTGCCAAAACAACCACAACGTAC
CACTAATGTACCTCATTACACATTCAATTACAAGTAAAAAAAAAAACATTAAAATTACAT
TATAAATATGAGAGGAGTTTTTTTTACAGACAAATAAATAAAGCTCAGAGACTCACAAAT
AAACGCATTCATAAAAATAATAAACGAACGAACACTTCTAAATTAATCTGTCTTTATATT
GAGTGTAGCAAATTCGAAATAGCAAAAGCCGTGGCTCGGTAGTGTGCAAAATCAGTAAGT
ACACGACTAAACATCAGTCCCACAGATGTTCGATTAATAAATAACATTAAACTACGTTCG
ATAAATCTAATATTCGCATAAGATCGACGTTTAGAATTTAATTCATAAAGTGTACGGTTA
TCGCTTGTTATCATATTAACTGGCAATACGAACAACGAATACCTACTTAGAAATGACGTC
ACTCGCGTTCCACGCATATAAACATTCCATCAAAAATTCCGGGACATAACCGTAGTTTAC
GATCATAGAGGTATTTACTTTCAGACTTTATCTGCCGTTCAAGTTTAAAAATCTAATTAA
CTGAGACCACATCAATTTATATTGCGTAGCATGTAAAATTTGATAAATTATGTTACGTTG
TGCCATTTTATATTTAGAACAGCAGTAAACAAGCATTTTTAAACGATACCAAGTTAAATT
TTCCAAATTCGAACGGCAGTGTTGTGATGTATGAGAGAGACAGATATAGGACGGGCGGCG
CGTTACAACGAGGCGTGCTATAAGTCCTGCGTCACAATGATATCGTTTCGACGCAACGCT
GCTACGAAGGCGTCGAGGGAGGACCGCAGCGTGAGGCAGAAGCCGCGCGAGGCCGGTATG
AGGGGGTAGTCGGGGGCCAGGGGGCTGTCGGCGGCCCCCCGGTGGTCCCCCGAGAGCGCG
ACGAGCCCCTGCAGCCGCGTGCAGAGCGCCTGCGCGTGCGTGCGCATGTGCTGCATGATC
TCGTCGCGGAAGGGCTCGGGCGGGTTGAGCACCATCTTGGTCATGGACTGGACGAGCTTT
AGGAGCACCATCTCGTTGTACATGCGAGAGTTCTCGTTGCCTTGCTGGGTGCCTTTCTGT
TTCTCGTATCCAGCTTCATTGAAGTAAGGTTCCGCGTTGAGTATGAGTCCCTGCAGCGAC
ACTATGACCTGCAGCAGCGAGCTGTCCTTGCCCCACACCTCCACGCCGCGCCCCGACCAC
GTGCCCAGCAGGGATACACACACCTTCCCGTCCTCGTACAGGTTGGGGTTGAGTCTGTCG
GTGCAGTAGGAGTGGTAGTGGCAGAGCGGCGGCGCGCGCGGGTACTCGCCGCCGAGCTGC
ACGTCGAACACGAACAGCCCGTCCTCGTACGGCGTCTTGGCGGGCCCGGCTATCATCACC
GACAGCAAGTCGATGCGGTTCTCGTAGCCTCTCACCCATACGCCAGGCGGTAAATCACTC
CTCAATAGTTTAATCTCTCGTTTGACAGCTGAATGGAAGGATCTCGGGTCTGACGGCTGC
AGGATTGACAGCCGGAACCTGTGTCCGGAAGGAGCTAGCTCCAACATTGAGAACCCTTCA
CCACCGGATTGGGTGCCGGGCTCTTCAGACTCCATCTCTACGGCTTCAACTGAAGCTAGC
GGTGCTGTGTCTGGAGCAGGACCTTTCTCAATTTCTTTTTCCGGAACACTAACAGTCGTG
ACCTCCTTGACATCACCATCGTCCGGTTTAGCATCAGTCTTAACCTCGTCTTCGCCCAAA
CTAACCACGAGATTACCATAATGAACTGAAAAGTGGTACGGTAAATTCTCCTCGGTGTTT
TTCGTTTTCATTAAGTTGTTAAGGAAACCGGCCAACTCTTGCGGCCTTCTCCGATTCATC
TCCGCGTGCGCCTTCACTAGTTGCGTGTGTATGAGCGCGCAGAGCTTGTAGCAAACGTTC
TTGTTCCTCATTTCGACTGTTTGCTCTGTTGATGGATTTTCAACGGCAATGGTTTCCTGT
GTATTAGCAGTGTTGGAACTGGAAGCGTGTACCGTTGATTCAGAGGTCGAATTCGTGTGG
ATCTTCGGGGAACTGCTTTCAACCTCCATAGGTTCAGCCGTGACATTGGAGCTGATGATG
GCTGTGGGCGTGGGTTTCTCGACGTGTTCGTCGACGAGCATGTCCTGTTCGGCGCTCGGC
TCGCTCGGCGTGAACAGACGAGCGAGCTGATCGTGCACGCGCCGCTCGCCGAACCGGGGG
TGATTCGTGCCGCATTCGCGAACGCGTTCTAACAAACCCAAGAAGTGATCTTCATGAAAG
AATGTGGTGCCCATCAAACGGTCCAAAAATCGGCAGTCTTTGTATAAATTGAGCAGTTTT
CGCATAATCTCCTGTGTCTGCAATGTAGGATGTGCAGCGAACATCTCTTCCAGTCTTCTC
ATGGCGACGCGGCCCCTTTCAATGTGGGCTGCGATTCTGGGTTCTAAAAGTTTCGGTATT
ACGATCACGCCTTTACTGTCTCGCGGTGAAGGGTGGAGAGTTATGGCTTGCACTGGTGTA
GCTTCAGGCGTCCTTACGATGACATCGTGTTCCCCGTGAGAGCTTTGCGTCTCCCAGGAA
TCCTCAGACCCAGACGCGTCAGACGCCCATAGCTCGCCTTCTTCTGAATCGTATTCACCC
ACCTTGTATAAGTCCTGTGGCCAGCACATACTAGTGTGTCCGTCGACCCACCATACCTTG
ACTCGACCCGTCGGATAATTATCGATAACTTGTCCGGCGGTACAGTTGGCATCTTCCCCC
GTGAAGTTAGCTACACGTATGACGACAGTACCAGGTCGATATTGGAAGTCTGGATGGTCT
TTCAAGTCGTAGACACTAACTTCACTCTCGTACAACATTTGTGGGACAGGTTCGTCTGCG
CTGGTGTAGGTGCGGTACCAGTGCACGATGGCGGTGCGGCCGTGGTGGTCCACGCGTTGT
ACCACGCCGTATTCACGGTGCTTTAGCTGTTGGTTCTCTTCAATATTAGCAGCACCACTA
ACTACAAAGTCTCCTGGGAAACACTCCTGTCCGTCAAGATGATGAATTGGATATAG
(3176 bp)

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