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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26108_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_MICAL-like_protein_1_isoform_X2_[Bombyx_mori]
Ontology
GO:0001725 C stress fiber
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0005923 C bicellular tight junction
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0017137 F small GTPase binding
GO:0030041 P actin filament polymerization
GO:0030054 C cell junction
GO:0031005 F filamin binding
GO:0031175 P neuron projection development
GO:0031532 P actin cytoskeleton reorganization
GO:0032432 C actin filament bundle
GO:0032456 P endocytic recycling
GO:0034446 P substrate adhesion-dependent cell spreading
GO:0042805 F actinin binding
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0046872 F metal ion binding
GO:0051015 F actin filament binding
GO:0055037 C recycling endosome
GO:0070830 P bicellular tight junction assembly
GO:1903955 P positive regulation of protein targeting to mitochondrion
Transcript
Level		FPKM:2.99 TPM:2.52
ORF EntryO_TrvaMG11392_complete:A_TrvaMG_comp26108_c0_seq1
Sequence
(Nucleotide)
AAAATGTACAATATTATAACGCTAAAACAAAGTGTTTCGACTATTTTTATTTATTAAACT
ATGTTCAACACTTCTGTGAATGTAAACGTTCAATTTTAATTGTTAGGAAAGATTTTTAAA
TTCTTAAAAAATGTCGGAACGAAAGGGCACCAAAGCTCTAGAGTTGTGGTGTAAGCGATT
AATTAAAGATTGTCCAGATATACAAATAGAAAATATGACAACATCCTGGAGAGACGGAAT
GGCATTCTGTGCTTTGGTTCACCATTTTAGGCCAGATTTGATTGATATGTCTAAATTGAA
ACCTGAAAATATTTATGAAAATAACCAACTAGCCTTCAATATAGCTGAAAAGTATCTTGG
TATTCCCGCTTTACTAGACCCCGAGGATATGGTGGAAAATGATATTCCGGACAGGTTATC
TGTTTTAACATATTTGTCACAATTTTATCAGCGACTCAGTCACACTGTGAACACTAAGGT
GTCAGAAAATGAATCTAAAGCTCTGTCTCAAAAAACTGCAACAGAATCACCTACACCAGT
ACGTTTTGGTAAAACCGGTCTTGACAAGTGCACATTGTGTGGTTTACCTGTATATTTGGC
TCAGCGCCTCATGGTAGCACACAAACTTTACCACAGAAGATGTTTCCGTTGTTCAAAATG
TTCAGGACATTTGAATCCTAAGAGTTTTGAAATAGTTGAAGGATCTGATTTTACTTGTGA
CAGTTGTAAAAATGATAAAACTCTATCAAAACTCTTAAACAATAATAATGATCAAAATCA
AATGGGCATGTTGGCATTCAGTGATGTATTAGATGAACCAAAACCAAAAGACAATATATG
TGAAGATAAAACTAGTTCTAGAGAAATATCACGACCACAATCAGTACTGGACAAAATAAG
TATGTTTGAGAAAAATATAGAAAAAGATAGCTCCATAGATAGTAAGATGACTAAAGAAAA
TTCCAGTGTGAAAAGTATAGATTTAAGAAGTGAAATAAAAAACGAATTTGACTTGAAATC
TCCAGTAGATAAATTATTGGATTTCCACAAAGAAAATCATAATCCACCAGAAGTTGTTTA
TAAAAGTAATCTTAGTAAATTTAATTTCTTACAAACACAACTTTCTGATGCTTCAAACAA
TGACACAGCTGTAGAAGAAATAACATTACCTAAAATTGAGCACAAATTAGAAGAAGATCT
AAGTATCATTGTAAAAACACCCTATAAAGAAGAAGTTTTATTTGAAAGCAAGGAACCTAT
AATACTTGATGAGTATAATAATATAACTGATGACAGCAGACTTGCTAACAGTCTGAATGT
CACACTAAATAACACAGAGCCAATTCCTGAACAAGTTGATGTAACAGAGCCAGAAATAAA
AATTCATGTGCCACCACGCCGCAAGAAGCAAATGGCTCAAGTAAAAAAAGCTGAAAAATT
AGCACAAACTAAACAGCCAAAATTACCAACAAGTAATAGAATAAAAAAGGAATATCCAGA
TCATTTAAACCCATTTTCAGATGATGATGATGATGGTGGTGATGAGGTTCTGAGCCCACA
AAATCCACCTCAAAAAGTGAGCACTAATCCTTTTGGGAGTAGTGATGAAGAAGAAGATGA
ATTACCACCAGTATCCTCTACACCAAAATCATCTGAAACACAACCTGTAAAACGTCTAAT
AGCTGTCAATCCTTTTTGGTCCGATGGGGAAGAACCTTCTACAGATGAAGAAATGGATGA
TATGAGCTCAAAAATGTACAACTCTTCGATTGCGACGAGCACGCCTAACTTACCGTCGAG
CGCGACTAGACGTAAGAAGACGAAAGCGCCTCCTCCTCCTGTCGTATTGGTGTCTGAACC
GCAGCAATCTTGCACGTCGATGGACGATGTCGCCAGCATATCATCGCATAGCTCTTACAA
TTCCACAGCTACCTCAGAAAATAAATACGGTAAAGGCACTCCGATGACATCAAGGAAAAA
TAAACTGGCTCCCACTCCTCCCGACAGCATATCGACGTTGTCCGAATGTACTGGATCATT
GGAAAAGGTCGTCGATACATCCGGCCTTGGAAGTAACAATTCTAGTTTGGTTGGGCGAAG
AACAAAAGGTCCAGCTCCGGGGTTGCCGCTGCCGGAGCGACGCGAGGTGAAGCTCCAAAT
GTCGCCCGAACAGTTACAAGTGCAACTGGACCTGCTGGAGACGCAACAACTCGGCCTCGA
GCGACAGGGAGTACTCATCGAGAAGATGATACGGGATAAGTGTGAGGGTGATCAGCCTTC
ATTAGCTCCACAAGAAGAGGTGGAAGATCTCGTGATTCAACTGTGCGAGCTCGTCAACGA
AAAGAATGATCTGTTCAGGAAACAAACGGAACTCATGTACATTCGTCGTCAGCAACGATT
AGAACAAGAACAAGCAGATATTGAACACGAGATTAGAATCATACACTCGCGTCCGGCTGT
GAACCGTATTGATGCCGATAAGGTTCGCGAAGAGGAGCTGGTGACGCGTCTGGTGGAGAT
CGTGCGTCTCCGCGACGAGCTGGTGCAGCAGCTGGACGCCGAGCGACGCCGCGAGCGGCA
AGAGGACCTCGCCATCGCAGCCTCCATCGCAACCAAACGAGCTCAAAGACAAAATGATTC
AAACAATTCATCAATCAAATCCGTTGAAGTAGTAACACCTAAAAAAAATAAGGTAAAAGA
TAAAATGAAAAAGCAGTTTAAAAAGGCGAAACATACTTTAATATCTAAGAAAAAAGAAGA
TTCACCTGAACACAAAGAAGAAAAAGAAAGAAAGAAATCAAAATAGAACATTCACACAAT
TGATTTTCACTTACGCAGATATTAATTGATATTAACATTTTCAATTCACTCTTTTATTTC
GCTTTTAAATGTACTGAAAGTACTTGCAAGACTGAATCATTCCACTAAATAATTTTTATT
ATTGAAAAAAAAGTCAATTAGGTATTTAAATGTATGGGTCTGAAACTCCGTTCGTTTTTA
TAGGTTAGTTGTTTATTATTTTTAAAATGTAAATGTCAAATTTTCAGGACTGTAAACAGG
TCTCTAAGTTATTTGATTTGTTTAGTTTAAATGAATGGGTTAATTGGACGTATCATTAGA
ATTAATCAACAATATTTTCGTGCCAGATTTAGTGTAGTAAATTCACGAAGACGTGTTAGG
AAATACGTACCGAGTCTAGTTACAACAATTGAAATAAATTCAAGAGCTTTTGCGTCCTTA
CATTGCAGCCAACTGTCTTTATTTTATGAAAGACATTAACATTATACATAGCTACTATTT
AGCTGTTAAATTTTATGTTCAGTCTATTTTATAGTTATATGTTTGTTCGTTTGTTATAAG
CTCTGAGCAAAAATTATTTTCGAATATAAGATAATATTATGTATTTACTTATTTTGTACT
TAACTAACATAGTATTAA
(3438 bp)

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