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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26101_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		transcriptional_regulator_ATRX_[Danaus_plexippus]
Ontology
GO:0000166 F nucleotide binding
GO:0000775 C chromosome, centromeric region
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0005722 C beta-heterochromatin
GO:0006281 P DNA repair
GO:0006336 P DNA replication-independent chromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0007399 P nervous system development
GO:0007411 P axon guidance
GO:0008347 P glial cell migration
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0032508 P DNA duplex unwinding
GO:0042585 C germinal vesicle
GO:0046328 P regulation of JNK cascade
GO:0051276 P chromosome organization
GO:0070868 P obsolete heterochromatin organization involved in chromatin silencing
GO:0097193 P intrinsic apoptotic signaling pathway
Transcript
Level		FPKM:0.85 TPM:0.71
ORF EntryO_TrvaMG11373_complete:A_TrvaMG_comp26101_c0_seq2
Sequence
(Nucleotide)
GGAGTGAGAGGTGGGCAAATACCCAAAACTAAATAACCACTGCTAGGCTCTGATAGGCAT
ATCTTCAAGAAGTTTCATGTCTAATGTGCAGATTTCTTCACTATTACAACATTCATATTT
CACACATAGCTAACAGTTCTGTAGAGAGTTGATGTAGTGCAGGTACTCACATTCTGGTGC
TGCATGAGTTGTTGCAGACGCATCTGTTGTTGTTGTTGCTGTTGTCGCTGCCACGGCGGC
TCGTACTGCAGAGAGCTCGAGCTGCTGGTACCACTGGCGCCGCTTCCTGTTGCCGCTGCA
TTCATACCAGAGCCCATCATGGCCTGATTCATCATACCAGGAGCATATTTGTACATTTCA
TTCATTTTTTGTAACATCCCCATAGCCGGAGTATTGTAGAGTAGTGGCAACATGTCCCGG
ATCTGATTGTCTGTGATGTTGGGCATGTCCTTCCGCAACATGGCGGCCACGGCGTACGCC
AACTGCTGTTGCTGTTGTGCTACCAAACCGGGCATCATGCCGTTGTGCATGGGCCAGGCG
GAGGGGAAGGGTGCGGGCGGCGGCCTGTTCTTCTCGTTCTCGAAGTCCTCCCAGGCGGCT
TTACGTTCCTCCTCTGTTAGAGTTTCCTCCTCTTTGTTCTCCAATAACGAGTCGTGCTCG
TGGTATTTGTATATCTGGTGCTCGTGCTCCCGCAACATCTCCGCGAACAGTCTGTCCTTG
GGCAGGGCGGGCAGCTCGCGCGGCGCGGGCGGGGAGGGCTCGAACTTGTACAGCTCCGCG
AGATCGTTCTCAGCGTAATGTCGGTCGATCTGTTGCTCGTCGATCACTCGCTTCGATATA
GCCTGCTTCGTCACTTGACGCTCGTATATCTTCTCTTCCATTGTACCCATAGCCAAAAAT
CTATAAACATAACAAGGTTTCTTCTGTCCAAAACGATAGACTCTGAAGATACTCTGCACG
TCGTGCGAGGGGTTCCACGACACGTCGAATATAACGACTCTGTTGGCCGCCACCAGGTTT
ATACCGAGACCGCCCGCTCGGGTCGAAATCAAAAATAACCTTGCTCTAGGATTATCTTCT
CTATTAAAATTCTTACACCAAATGGAACGATTTTCACATGAAGTAGAGCCATCTAACCGG
AAATAGTCTATACCTGGTGACCATGACCCCATGTGACCTCCTAATTTCTCGTCGATTCGA
CCAGCCTGTGTTGCATCATCAACCTTCCCCAGAAAATGTTCAATCAGATCCAATGAATAT
AATGATTGAGAGAATACCAGTAACTTATCCCCAATAGCTTCACACTGCCGTAATATATCG
AAGAGCAGTACAAGTTTGTGTGAGTTCCTCATGTCTTCCAGTTCATCTTCAGAGACCAGT
TTGATCCACCATTCGGTCGGATTCTCATTCTTTATTTCAACAACCTGTTCAATATCAGAA
TTCTGGTCGTCTTGTTCCACTGGATTAGCTCTGGTTCCCCGTCGCGTGCCCGCTTTACTG
TCCTTCCCTTTGCCCTTCTTGGCAGCCTTCTTCTTCTTACTCTTCTTCCGACTGTCATCA
CTCACATCTGATAAATCATCTGAGGACTCTTCTGTTGAAGTCTCCTCCGGTGTGGAATCG
TCATCAATAAAATCGACTAATGATCCTTCTGAGTCTTCTTCTTCTCTCTCCCTTTTCTTT
TGCTGCATTATTTCGTATCGCTCAGAGTTGTATTTCAAAACGAGCGGATGTGTCCATATC
CTCTGAAGAGATTGAAAATCAGGAAACAAGAATCCTGATGATTTTCCCGGCATTGGCCTT
CGTGAGTAATTTTCTAAATAATGTTGATATAATTTAATTTGAACTTCACTCAGTGTTATA
AATAGTACGTATTCGTGTTTCGGAGGAAGGAATGGCGCTAAAACTCCGTAATCTCTCCTC
TGCACAGCCCCATCCAACATTTTATGCAAAACGTGAGATCTTCTCTTCATAACGCGAATA
TCGTGTTCTGTTGAATCTGTGTACTGCCCGTTAGTGATGGGGTTCACGAAACGGTTCAAA
TACTCATTGTATTTACCAAGGAGATTCGGTTTCACGAATTGTACCATGCAATAGTATTCT
TTAAGATTATTTTGTAAAGGAGTTCCAGTAAGTACGATGCGCCGTAGAGTTTTGACTCTG
TTCATGGATTGTGAGAGACTTGTCTTTTCATTTTTCAAAAGATGTCCTTCGTCACAGACT
ACTAAATCTGGACCTGGATCAACTAAGCTCTCCTGAAAGTTTTTAAGCATCTTCTTTTTG
AATTTCTTATTGTTGTCCGCTGAGAGATTTCTAAACATCTCGTATCCGAGAACGCAAACC
CCGCCGCCTTTGAACCACTGGCTCAGTTGGAATGCACGCTCTGAGTTCTGTTTGAACCTA
GAGAGCTCATAAACGTCGACTTCATAGTCGTTTTCAGCGTGTTTCAGCCACATCCTGAAC
TCGTTGACCCAGTTCAGTACGGTGGACAGCGGACACACTACCAACACTCTGTTCACGCCC
GTCAGAGTACCGTGGGTTAGAAGGGTGTGCGTTAATGATATCACCTGTAACGTCTTTCCC
AAACCCATGCAATGCGCCAAAATACATCCGGAACCCTTGTCTTTCTTGATACGTTTCACA
CTTTCAAAACACGCATCCCACATGAACTTTATACCATTTGCCTGATGTGGTTTTAGTTTT
TTAACAAGACCCCTGTCAACCTGTATTAGAGGTTCCTTGGTCTCCGGATCAAAGTCCAGA
ACAACCTTCTCCAGAACAACTTCATCCGGTTTGCCAGATTCGTCAAATTGTAGATTGTTA
TACAGTTTCTGTCTCTCTGCAATTCTAGCGATCCTTTCTTTCTCCTCACGAGCCGCTTTC
TTCGTAGCCTCTTCCAATTGATCTTTACCCATAACCTTACGTATATTTTTCCTTCCATGT
TTATTCCTACCCTCAGTCTCTTCCTCAGAATCAGAGGCGTCACTGTCATTTATTTGTTTT
ATACGACGACGTTTTTTCTTATTCCCATCCGAACAGGATCCAGAAGCGTCACTGTCTGGT
TCCTTTTTCTTCCGTTTGCTCTTCTTACTAGGTTCAGAATCATCGCCCGAGTCTTCGAAG
TCGCTCAGTCTGACGTCACGGTCCTCCTTCTTACGCGATGACCCGACTTCAGAGTCTGAT
GATATGGCGTTCGCCTTACGACGCTTTGATTTCACATTGTCGTCTTCAGACTCGTCCATT
AGTGTGTTCTCTGAAGTCTTTTCTTTTTCATTTGAAACCGATGAATCGCTTTCTTCAAGT
AATTCACTTTTACTGATGTGTTCAACTCCATTATTAAATGTTACAGCAGGTATTTCTTCA
CATCCATCACTTCCTGGTTCTGAAGCGACTTCTGAGCTCGTATCTGCGTCGAGCATCTGT
TCACCGATCAATTCGTTTGCTTTAGATCTATGGTTATCTTTTTTTTTACTAGTCTTATCT
GAATCGTTTTCTGCAGATTCACGCCGTCGACGTGGTTTCTCTAACGATTCCAAGTTTGTA
AGCCTATCAACATCTTTGTCATCCTGAGTATCTGAATTTTGGCTGATGCTGCTCCCAGGC
TTCGTCTTAGATCGGACCATCTTTCATGTAAATGGCTGAACAGATCGTTCTGAGTAATTA
TAAGACCAAAACTATTACTGAACACAATAGCAAAACATTATTTCATGTTATTACACTCAT
AAAAGATAAAAA
(3732 bp)

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