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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26101_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		transcriptional_regulator_ATRX_[Danaus_plexippus]
Ontology
GO:0000166 F nucleotide binding
GO:0000775 C chromosome, centromeric region
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0005722 C beta-heterochromatin
GO:0006281 P DNA repair
GO:0006336 P DNA replication-independent chromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0007399 P nervous system development
GO:0007411 P axon guidance
GO:0008347 P glial cell migration
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0032508 P DNA duplex unwinding
GO:0042585 C germinal vesicle
GO:0046328 P regulation of JNK cascade
GO:0051276 P chromosome organization
GO:0070868 P obsolete heterochromatin organization involved in chromatin silencing
GO:0097193 P intrinsic apoptotic signaling pathway
Transcript
Level		FPKM:2.52 TPM:2.12
ORF EntryO_TrvaMG11368_complete:A_TrvaMG_comp26101_c0_seq1
Sequence
(Nucleotide)
TTTTTTTTCATTTTTAATTATTTATTATACTTTGATTGTACTACAAAATAATAGGAAGTT
CTCTACAATTACAGTTAATTATAATATATTACATAATATAATCATGAAACAATTATAGCA
GACTTGTCACCCTCAACTCAAGCAACCAATGCAGCATATTGGTAAATATAAAACCATATG
AAGCATAACTTAGGTTATGTTTGAGATAACAAGATATTTATTATGCCTATAACTAAACAA
AATACTGCTTGTTTATTAATTGTAAAAACTATAAATAACATCATTAAATGATAAAGGGAT
ACTATAAAAAATCAAGTCATCAAAACATGAAAACTTATAATCAAATTCAAAATCAGACCT
CACATTACATTCCGATTAAAAATTATAATTATGAACCTATAAAATGTTGTATCTAAGATT
AAAGTCACAGTGATGACTCATTAAAATAAACGTATACAAAAATTTAAGGTTATGCATTAT
CACAACAAAACTGCCTGTTTGTGCAGACAAATAAATATAGTCACAAAATGATAAAAATCA
CTAAAACATTTCACAACAGACCAATGAATAATTTTGATACAAAAAATTGAAATTTTTACT
AACCTAAAGGTACACAGTTGCGCATGCTCATTACTAGAACAAAAGCATGCTACTAATGAG
CAAATGTGCTAGTCTATGTGAAAAAGACATCCTTTTGAGCATTTAATAGCATGTTTGAAG
TATGACCATTTTTGAACATGTTCATAAAAAATAGTAATGAGCATGAGTAACATCCCCTAT
GAGAATTTAATTGTATAATCAATTGGCAAGAATGCACAATATTTTTTAAAAATTTTGTAG
ATATTTTTTTTTGTAAAAATAATCAAAAATTTGGTTTACTAGAATTTAGAATGTTGGTTT
TACCTGCACACTTAACACCACTATTGCAGTTTTAAAAAAAGTATTATAAAACAAATTCAA
CTAAGTTCCAATACATCCCTAGATACCAGAAATAATCAAATTGCAGTCATTTGTAGCTAA
ATGAGTAAAACCTCAAGAAAAATATTGCACAATTATTACTAGAACATAAGCATTTCAATG
TAAAAATAACAAAGTTTTAAAACTATTAAGTCACTAAAATACAGCTATTGGTGTTTCTGC
TCTAGTATTATTATTGTAATAATAACTATAAAATGTTATATATATATTTCGTAATATGAG
AATGGAAAAATTAGTGCATATAAGTGAGTTACAAGTAGTATATTCATCAGTACTCATACA
TTTCGCAAAACTTCAAATCAGATGACCACTAACTACACACAAACTTATTAGCTAATTTCC
TGTACTGAGAGATATATTTAAAAATCATGTGTCAAGCATTCCACAGCTTGTGTTATTTGC
ATACACTATTCACAAAATTTTAAATACAATGTATGCTGGAATGCTGCTAAGGGGAGATGC
ATCTGTGGAATGCTTAATTATTTTGTTCAATACGCATCGTCCCTATAGGCTGAACGCCAG
CGTTCTAGCACAGGTGTGTTTTAATTTCGAGTTAATTAATAATTAAAGTCAATAAAACAT
TTCCAATTGTGCCATAATAACAATTCTGTCATCTTTCGTTTGAGAAAATTAAGTGTCATA
GATATGTGAACTTTATTCATTCAAGTATTTTCGTAGAGTCGAAACGAAAATAAGAAAATA
TATCTAAAATACTGAGATTCGTGATATGTAGCTTTAGAGCGTGTGTCTTAGACGATAAGC
TACATATATAAGAGCTAAACACTTTCACTCCATAATTTGGCCAACAGTACAAGTCCAATA
ATTTAGGAATTTTTTACTTTGAATATTTCCACGACTTCACTGACTTCACGTCTGAATCAT
TTTCTTCTCTTCACCGCGTGTAGCACCTAATTAGAAACTGTACATTTCGATCGATTCTGG
TTCACCTGCGGGTGTTTAGTCGGAGTCGAGGTTGACGACGTCGTGCGCGGGCGTGGGTTG
GGGCGCGCGGGAGTGCGGCGGGCGGCCGCGCGGTCGTGAGGCTCCGCCCAGCATGAGGTC
CCTCGCCCGCTGCTGTTGTAGCGCCATCGCCACGGGGTCGCGGCTGCCCAGTCCGCCTGC
GTAGTACTTCGCACCCATTTGATTCTGGTGCTGCATGAGTTGTTGCAGACGCATCTGTTG
TTGTTGTTGCTGTTGTCGCTGCCACGGCGGCTCGTACTGCAGAGAGCTCGAGCTGCTGGT
ACCACTGGCGCCGCTTCCTGTTGCCGCTGCATTCATACCAGAGCCCATCATGGCCTGATT
CATCATACCAGGAGCATATTTGTACATTTCATTCATTTTTTGTAACATCCCCATAGCCGG
AGTATTGTAGAGTAGTGGCAACATGTCCCGGATCTGATTGTCTGTGATGTTGGGCATGTC
CTTCCGCAACATGGCGGCCACGGCGTACGCCAACTGCTGTTGCTGTTGTGCTACCAAACC
GGGCATCATGCCGTTGTGCATGGGCCAGGCGGAGGGGAAGGGTGCGGGCGGCGGCCTGTT
CTTCTCGTTCTCGAAGTCCTCCCAGGCGGCTTTACGTTCCTCCTCTGTTAGAGTTTCCTC
CTCTTTGTTCTCCAATAACGAGTCGTGCTCGTGGTATTTGTATATCTGGTGCTCGTGCTC
CCGCAACATCTCCGCGAACAGTCTGTCCTTGGGCAGGGCGGGCAGCTCGCGCGGCGCGGG
CGGGGAGGGCTCGAACTTGTACAGCTCCGCGAGATCGTTCTCAGCGTAATGTCGGTCGAT
CTGTTGCTCGTCGATCACTCGCTTCGATATAGCCTGCTTCGTCACTTGACGCTCGTATAT
CTTCTCTTCCATTGTACCCATAGCCAAAAATCTATAAACATAACAAGGTTTCTTCTGTCC
AAAACGATAGACTCTGAAGATACTCTGCACGTCGTGCGAGGGGTTCCACGACACGTCGAA
TATAACGACTCTGTTGGCCGCCACCAGGTTTATACCGAGACCGCCCGCTCGGGTCGAAAT
CAAAAATAACCTTGCTCTAGGATTATCTTCTCTATTAAAATTCTTACACCAAATGGAACG
ATTTTCACATGAAGTAGAGCCATCTAACCGGAAATAGTCTATACCTGGTGACCATGACCC
CATGTGACCTCCTAATTTCTCGTCGATTCGACCAGCCTGTGTTGCATCATCAACCTTCCC
CAGAAAATGTTCAATCAGATCCAATGAATATAATGATTGAGAGAATACCAGTAACTTATC
CCCAATAGCTTCACACTGCCGTAATATATCGAAGAGCAGTACAAGTTTGTGTGAGTTCCT
CATGTCTTCCAGTTCATCTTCAGAGACCAGTTTGATCCACCATTCGGTCGGATTCTCATT
CTTTATTTCAACAACCTGTTCAATATCAGAATTCTGGTCGTCTTGTTCCACTGGATTAGC
TCTGGTTCCCCGTCGCGTGCCCGCTTTACTGTCCTTCCCTTTGCCCTTCTTGGCAGCCTT
CTTCTTCTTACTCTTCTTCCGACTGTCATCACTCACATCTGATAAATCATCTGAGGACTC
TTCTGTTGAAGTCTCCTCCGGTGTGGAATCGTCATCAATAAAATCGACTAATGATCCTTC
TGAGTCTTCTTCTTCTCTCTCCCTTTTCTTTTGCTGCATTATTTCGTATCGCTCAGAGTT
GTATTTCAAAACGAGCGGATGTGTCCATATCCTCTGAAGAGATTGAAAATCAGGAAACAA
GAATCCTGATGATTTTCCCGGCATTGGCCTTCGTGAGTAATTTTCTAAATAATGTTGATA
TAATTTAATTTGAACTTCACTCAGTGTTATAAATAGTACGTATTCGTGTTTCGGAGGAAG
GAATGGCGCTAAAACTCCGTAATCTCTCCTCTGCACAGCCCCATCCAACATTTTATGCAA
AACGTGAGATCTTCTCTTCATAACGCGAATATCGTGTTCTGTTGAATCTGTGTACTGCCC
GTTAGTGATGGGGTTCACGAAACGGTTCAAATACTCATTGTATTTACCAAGGAGATTCGG
TTTCACGAATTGTACCATGCAATAGTATTCTTTAAGATTATTTTGTAAAGGAGTTCCAGT
AAGTACGATGCGCCGTAGAGTTTTGACTCTGTTCATGGATTGTGAGAGACTTGTCTTTTC
ATTTTTCAAAAGATGTCCTTCGTCACAGACTACTAAATCTGGACCTGGATCAACTAAGCT
CTCCTGAAAGTTTTTAAGCATCTTCTTTTTGAATTTCTTATTGTTGTCCGCTGAGAGATT
TCTAAACATCTCGTATCCGAGAACGCAAACCCCGCCGCCTTTGAACCACTGGCTCAGTTG
GAATGCACGCTCTGAGTTCTGTTTGAACCTAGAGAGCTCATAAACGTCGACTTCATAGTC
GTTTTCAGCGTGTTTCAGCCACATCCTGAACTCGTTGACCCAGTTCAGTACGGTGGACAG
CGGACACACTACCAACACTCTGTTCACGCCCGTCAGAGTACCGTGGGTTAGAAGGGTGTG
CGTTAATGATATCACCTGTAACGTCTTTCCCAAACCCATGCAATGCGCCAAAATACATCC
GGAACCCTTGTCTTTCTTGATACGTTTCACACTTTCAAAACACGCATCCCACATGAACTT
TATACCATTTGCCTGATGTGGTTTTAGTTTTTTAACAAGACCCCTGTCAACCTGTATTAG
AGGTTCCTTGGTCTCCGGATCAAAGTCCAGAACAACCTTCTCCAGAACAACTTCATCCGG
TTTGCCAGATTCGTCAAATTGTAGATTGTTATACAGTTTCTGTCTCTCTGCAATTCTAGC
GATCCTTTCTTTCTCCTCACGAGCCGCTTTCTTCGTAGCCTCTTCCAATTGATCTTTACC
CATAACCTTACGTATATTTTTCCTTCCATGTTTATTCCTACCCTCAGTCTCTTCCTCAGA
ATCAGAGGCGTCACTGTCATTTATTTGTTTTATACGACGACGTTTTTTCTTATTCCCATC
CGAACAGGATCCAGAAGCGTCACTGTCTGGTTCCTTTTTCTTCCGTTTGCTCTTCTTACT
AGGTTCAGAATCATCGCCCGAGTCTTCGAAGTCGCTCAGTCTGACGTCACGGTCCTCCTT
CTTACGCGATGACCCGACTTCAGAGTCTGATGATATGGCGTTCGCCTTACGACGCTTTGA
TTTCACATTGTCGTCTTCAGACTCGTCCATTAGTGTGTTCTCTGAAGTCTTTTCTTTTTC
ATTTGAAACCGATGAATCGCTTTCTTCAAGTAATTCACTTTTACTGATGTGTTCAACTCC
ATTATTAAATGTTACAGCAGGTATTTCTTCACATCCATCACTTCCTGGTTCTGAAGCGAC
TTCTGAGCTCGTATCTGCGTCGAGCATCTGTTCACCGATCAATTCGTTTGCTTTAGATCT
ATGGTTATCTTTTTTTTTACTAGTCTTATCTGAATCGTTTTCTGCAGATTCACGCCGTCG
ACGTGGTTTCTCTAACGATTCCAAGTTTGTAAGCCTATCAACATCTTTGTCATCCTGAGT
ATCTGAATTTTGGCTGATGCTGCTCCCAGGCTTCGTCTTAGATCGGACCATCTTTCATGT
AAATGGCTGAACAGATCGTTCTGAGTAATTATAAGACCAAAACTATTACTGAACACAATA
GCAAAACATTATTTCATGTTATTACACTCATAAAAGATAAAAA
(5683 bp)

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