SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26076_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		hypothetical_protein_KGM_14412_[Danaus_plexippus]
Ontology
GO:0000139 C Golgi membrane
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008289 F lipid binding
GO:0015248 F sterol transporter activity
GO:0015918 P sterol transport
GO:0016020 C membrane
GO:0019904 F protein domain specific binding
GO:0030054 C cell junction
GO:0044128 P obsolete positive regulation of growth of symbiont in host
GO:0048471 C perinuclear region of cytoplasm
GO:0070273 F phosphatidylinositol-4-phosphate binding
Transcript
Level		FPKM:20.47 TPM:17.24
ORF EntryO_TrvaMG11288_3prime_partial:A_TrvaMG_comp26076_c0_seq1
Sequence
(Nucleotide)
CGCCTGTCCGCGCGCCGCCGCCGCCTCCGCCTCCGCCTCGAGCCGCCGCCGGGCGCCGCG
CTGCTTCTCCTCGAGGCGCAGCTTCTCCGTGTTGGCCTCGTCCCAGCAGCCCTCCTCCAT
GAGGCGCTGGTCGGGTCGCAGGCGCGAGTCGGTGGGCGCGACGCCGGTCTCGGGCTCGTT
GAGCTGCGCGGCGAGCACGGTGAAGTTGTACCACTTGTCGGAGTCGGCGGGCGCGGCCAC
TCGCTGCCACGCCGTCACGAACTTGCCCGTCTTGCACACGGAGTTGTCGGGCGACGTGCT
GGTCACCGGCGCCACCTCCACGCGGCTGTCCCAGTGGCCTTGCAACACGTACCGCGGCAC
ACCGTTGGGATCCTTAATGACCCCGGTGACTTTCCTCTGCGTGTCCTTGCTGAAGTACCC
GTAGGGCAGGTATTTGAGATGAGCGACGTACCCGGCGGCGGGCCCGGCGTCTCCCACGAT
GTCCATGTCTCCGTGGTTGTCGACCCACAGTTTACCAACTATTATATTGTGGACGGTTGT
TGTTACCTTCCTCCAGGTGTACTTGTTGCCGTGCTTGAGGAACATGGCGGAGGCGGCCCC
GAGCGGTATGATCTGCAGATACTTGCCGCGGAACTTGGTGGTCATGGTGAACTCCTGCCA
GCACTGCCAGCCCGCCGTGCCCTCGCAGAACTGCGCCACCATCGGCGGGTGGTGCGACAC
CTGTTCCGAGATGGCTCGCCAGCCGAGGTCGGTCATACGATCACACTCGTACGTTTCACC
CAGGAGAGGGTTGAATGGTTTGTTCGTTCTGCATGCCGTGGTAGCGTATGAGGAGACGGT
GAACGCGGCGACGTATGCGAGCTGGTGCGCGGGGTCATCGAACTTGGCGGCCTGGTCCAG
GATGGACGAGTACTCGTAGTCCTCAGTCAGGCGCTGCAACATCGACAGCGGCTCGCTGAA
GTTCACGGGGATGGGGATCTTTGATAACTCCTTGCCTATACAATTCTTCATGATGGACCA
GAGACTGAGCGGGTAGTTGGGTTTGTCGGGGACGCGCGTCCGTCGCGGGTGACCGTCCAC
GGCGCTCGTCACGTCAGACACGTGGGGATAGACGACGATGTCGGTGTCCTTGGCAGGCGG
CGGGGGCGTGCTGTTACCGTCGGCGCCTCCCATCGCGCTCTCCGCTCGCTCCTTGTCTTC
CACGAATATTACCTGTTGCGTTTCTGTCACTGTTTCACCTTCAGACTCATCCGAACTTTC
TCCGTCTTTTACTTTATTTTTTCTATTTACGGGTACTTTGATTACAAATGAAGTCTTGTC
ATCCATGTTGGTTGTGATGCCCTCCTCCACGGCATCAAAGAACTCATGGTCCTCATCCTC
GGTCTCGTTGCCTTGAGTTGTACCGTTGCCTCCTGTGTGCAGTGTGGAACGACCGGTGAC
TGTTTTCTCGAGAGTGTCGTGTTGTCGAGCCAGTTGTTCGACCACCTCCTGCAGACGGAG
CTTCTGTTCTCGTTCGTGTTGCAGGGCGCGGGAGAGACGCGCGCTCGAGCCCGCTGCCGC
ACTCATGAACTCGGAACAAGCATTCATCATCGCGTTACAAGATATTCTGAAAAGCGTCGC
GCGTTCCGAAACCTGCTTGGTAGTGTCCGATGGTGGCGTCTCCAAGTCAACAAGTGACCT
CTGCAGTGCGTTCCCGTGTCTTGCGACAAGCTCGGTACAAGTCCTAAGGTCGTGGAATCT
GGCGGCGAGTTCCCTCGCGATACCGCCCGCGTCATCACCCTCCCCTTCCCCGGTACCCCC
TACAACTACTGTTCCAGATGTCACTTGATCTTCATCATCGTCTGATTCTTGAGCTCGAAT
AGCTTTAGCCTTGGCCAGTTCAAGTGCAGTAACCCAGCTCTGACGTTCCACCTCATCATG
AGCCTTGATGTAGAATGTCTGAGTGCCTCCGTTACTGATGACGAAGGTGCAAGAGTCGGC
CGTGTGTATCAGAGCACCGAGCAGAGATATAGTTCCTCTGCATGTATGAGCCATCTCTGC
TTGGTTTCTGTAATACGATAATAATCCGTTAGACAACACGAACCACCTTCGCTGATATCC
TTTTAAATAATTTGTCCATTTGAAAAGCCATCCCTTCTTTTCAGGGTCACCAGGGGTTGG
CTGACCCTTAGGCACAATTGCTTCAGACATTTTATCGCTTTAAATATATTTATTTTTAGT
AAAACATAATATTAAACGATCCGAGCCACGTCCG
(2254 bp)

- SilkBase 1999-2023 -