SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26067_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_serine_palmitoyltransferase_2_[Bombyx_mori]
Ontology
GO:0003824 F catalytic activity
GO:0004758 F serine C-palmitoyltransferase activity
GO:0005739 C mitochondrion
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0006665 P sphingolipid metabolic process
GO:0006686 P sphingomyelin biosynthetic process
GO:0008152 P metabolic process
GO:0009058 P biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0017059 C serine C-palmitoyltransferase complex
GO:0030148 P sphingolipid biosynthetic process
GO:0030170 F pyridoxal phosphate binding
GO:0046511 P sphinganine biosynthetic process
GO:0046512 P sphingosine biosynthetic process
GO:0046513 P ceramide biosynthetic process
GO:1904504 P positive regulation of lipophagy
Transcript
Level		FPKM:16.93 TPM:14.25
ORF EntryO_TrvaMG11264_3prime_partial:A_TrvaMG_comp26067_c0_seq1
Sequence
(Nucleotide)
AAAAGATTTAAAACTAATTTATTATATTTTAACGGTTCTGTGAATTTATACTTTTGTGCT
TTTTTTACCACAAAAATTAAACTTGTCAAACGTCACTTCAATTGAATGTCAAAAGATGTC
GCTGAAACAGCAAAACCAAGCAGCTGAGAGTTCTGCCGTATTTCAAAGATTGTATTTCTA
TTGTCTTTCAATAAAATTTGTCTCACAAGCGCTTTCATTATTTTATCGTTCACTGTAGTA
AATAAGTCTATTACGCGGCACAGCGCTTAAGAAGTATTAAAATTGTAAAAAAAAATCGGT
ACGGCTACGAGTGAAACTTCGTTACTTCAACTAAAAGTTTACAACTTCACGTCGCATCGC
GTTTGATTTTAGTTTCAGCACATTTTCCAAGGATGGCGGCTGTTACGAACGGTGTTATCG
ACACTGGTGATGGGAGTTCTCTCAAAAAAGTTCAAAAATGTGTGGGGCAAGAGGACAAAT
TACTTAACAACAAAGTTAAAGATCATAAGAATGGTTACTTGAAGTCTACGCAGAGTAATG
GGGTAGCGCACAAGAGTCCCGGCGCGGAGGACGGTCTGCCTAAGATAGATTGGTCTCAGT
ACGACACGTTCCCGGGCTCGTTCGAGAAGTGTTCCCTGCTGACGGCGGTCCTCACGCACA
TCGGACTCTACATACTCATGTTCCTCGGCTTCGTCAACCAACTCGTGTTTGTACCGAAGG
TCGCCACTGAGAAGAACAGAGAGGGCTACGCTCCGCTGTACGACCCGTTCGAGCAGTTCT
TCTCTCGCTACGTGTACCGGCGCGTGCGACACTGCTTCAACCGACCGATCTGTTCCGCGC
CCGGCGCCGAGCTCGTCCTCAAGGAGCGCGAGACCACCGACCACAACTGGACGTTCAAGT
TCACGGGCGCTCGGCAGCGCTGCATCAACCTGGGCTCGTACAACTACCTCGGGTTCGCGG
AGGGCGCGGGCTCGTGCACGGCGCGTGACGTCACGCACGCCGTCACGCGCTACGGACTCG
CGCTCTGCTCCTCGCGCGCCGAGCTCGGCACCACGCCGCTGCATGTCGAACTAGAAAAGG
CTACCGCTGACTTCTTTGGTGTCGAGGACGCGATAGTGTTCGGCATGGGGTTCGCGACGA
ACACGCTCAGCATCCCCGGGCTCATCGGCGCCGGCACCCTCGTGCTCAGCGACGAGAACA
ACCACGCCTCACTTATCCTGGGGCTGCGCCTCTCCCGCGCCACCGTGCGCGTCTTCCGGC
ACAACGACGTCAGGCACGCCGAGACACTCGCGCGGGCCGCCATCGCCGAGGGGAAGTGGA
ACAACATACTCATTGTGGTGGAGGGCGTGTACAGCATGGAGGGGTCGGTGGCGGCGCTGG
AGGGGCTGGTGGCGCTGAAGAGGACGCTCGGGCTGCAGCTGTACGTGGACGAGGCGCACT
CGGTGGGCGCGCTGGGGGCCACGGGGCGAGGTGCGCTGCAGCGGTGCCGCGTGCTGGCCG
AGCACGTGGACGTGCTCATGGGCACCTTCACCAAGAGCTTCGGCGCGGCGGGCGGCTACA
TCGCGGGCTCGCGGCGCCTGGTGCGCTGGCTGCGGGCGCACGGACACGCGCCGCCCTACG
CGCACAGCATGGCGCCGCCCGTCG
(1644 bp)

- SilkBase 1999-2023 -