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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26057_c1_seq3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_zinc_finger_protein_on_ecdysone_puffs_isoform_X2_[Bombyx_mori]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003727 F single-stranded RNA binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005703 C polytene chromosome puff
GO:0005875 C microtubule associated complex
GO:0019233 P sensory perception of pain
GO:0046872 F metal ion binding
GO:0048024 P regulation of mRNA splicing, via spliceosome
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:0.44 TPM:0.37
ORF EntryO_TrvaMG11233_complete:A_TrvaMG_comp26057_c1_seq3
Sequence
(Nucleotide)
AGAACCCGTTTAGTAATAGTTTAAATGAAATATAATTTAGCCTATAGCCTTCCTCTAGCG
CACAAACAGTTCAGTTTTATGACGTTAAGATATTAGAAATGTCATACAATACACCATAGA
GAATGTTTAGTATCTCCCCCGAGCCCGGCCCCGGCCGCGTCCTCTGCCCCGAGGAGACGG
TTTAGGTTTGTCATTAATAACCTGTTTGGTTTGCGGAGGGGTTTTAGCTTTAGGTGGTTC
TTCCACTTTTTCGACAACCTCGGGTTCTTCTTTGACTTCAGGTGTTGGTTCTACTGGTTT
CGGTTCGGGTTCCGGTTCACTTTTTACTTCTGGTTCCGCTTGTTCATCATGGTTTTTCTT
TTCATCTTCAAGGATCTCATCGACAGACTGCTCCCAGTCCTCGAGCTCATCATTATTGGG
CATGCTGTCATCTAAATTATCATCATTTCCATCTGTCATATCGTTAGTATTATCATTGTC
CTGATCATCATCGTGTTCGTCGTGGTAGTCCCTGTCGTGCACGTCGTTGTCGGTGGATCC
GCGGCGCCTCTTGAAGTTGCCGGAGTCGTCGGTGCGGTCGGTGCGGTCGGCGGGACGCTT
GCCGTTCTTTTCATAACTCTCTGATTGTTGGTTGCCCGTCTTAAGCCCAGTCTTCTCGGA
CAGCATCTTGACGAAGAACACGTGGTGTCTCCAGGTCTTCAGGTGGACCTGAGCCGTCTC
AGGGGTATCGAGCAGTTTGCGACACAACTTGCACTGCACACAACGGAACTCGGTCAGGAA
CGACTCGCCGACACCGCGCTCAGTGCTATAACCAGGGAACATATCAGCAGTCACATGACT
GAGATCATCATCCTCCTTGAAGTCCAGGATCACCTTCTCATCATCGATGGGCTTATCATC
ACTCTTTTCTTCACCAACTTCCTTCATTTCTTGATCATCATCTTCCGGTTTCACTTTACC
GTCACCATCACCGTCAGTCTTTTCCCCATCATCTTTCTTATCATCCTGTCCATCCTCACG
GCGCGGTCTGCGCTGTCTCCGCTCGCACAGGTAGGACTGCTCCATGCCCAGGGTTGAGAT
CATTAGCATTTCAGGTTTAGGCTTAGTCAAGACATCCTGTTTATCCTGTATAGCCCTCAG
ATGCTCCGCCGTCAGCCGGTGCTCGTCCAGCTCGATCCTGGTCGGCATCTCCTTGTGGCA
CGTGTTGCAGAACGGATGCAGGTACTTCTTGAGCTTGCGGTGTCCGACGGTGGTGCGGTG
GGCGGCGCCATTCCCGGCGTACATGTCGCACATGGCGCAGTAGAAGTCGCGGGCTGGTTG
TTGTCCCGTTTTGCGGGTGCGTTTCATTTCGCGGATCTTATACTCCTGCCTCATCGTATC
AGCAGTCAAAGCGTAACTTTCAACAGTCTTCTGCATCATAATAGCGTGAGCTCTGCCACT
CAAATGGTTCTCGAAAGACCTTCCATCCCACATGCTCTTGTGGCATATGTGGCACTTCAA
CAACTTGGCGTTGATATCATCGTAACGAGTCTTAGGGACATCCTGTTTGTCTTCTTCGGA
AGTTTCTTTCTTCTCCACTTCAGATTTTTCCGTTTCAGAAGGCTTTTCCTCCGGTTCCTT
TTCACTCTCCTTAACGGGCTTAGCCTTAGAATCAGTTTCCTTTTTCGGGGAATTCTTGTG
CTGCCTCTGCCCATCATTGGGCCTGAATGGTTTGCGATTTGTGTTGATACGCTCACCAGC
GCGATTGTAATTTCCCGTACGCCGGAAATTATGATTGCCCATCTAAAGCGAATTCACCAG
AACATAACGTTAGTAAGAAAGCGGTGGACTAGCATGTCCTGAACTGAAATGTGTGGAAAC
TTAGGACAAGTTCAAGGGGACATCGTTGATTGGTTATTATTTGGAATAGTTGAAATAAAA
AATTCTGACAACTGGAATAAAGGTCATGTCATAAACAAAAGAAAGTGTATATCTGGAGGT
ACTATGATAGAACAAGGTGTTGTAGACAAAGAAATTCATGAGAAATAAAACATGTAGG
(2038 bp)

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