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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26030_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_transducin_beta-like_protein_3_isoform_X1_[Bombyx_mori]
Ontology
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0030515 F snoRNA binding
GO:0032040 C small-subunit processome
GO:0034388 C Pwp2p-containing subcomplex of 90S preribosome
Transcript
Level		FPKM:5.66 TPM:4.76
ORF EntryO_TrvaMG11177_complete:A_TrvaMG_comp26030_c0_seq1
Sequence
(Nucleotide)
GTTTGTTTGGTTTTTGTACTATTTGATAAATGAGAAATATTTTCACATGCTTTCTGTGCA
GTCTGTTTAATAATTATTATAAAATAAACGAGAATTCTATGCTACCTACAATTAAAAATT
ATATAATGTGATAATAGACGCACTCTCTGAGCTATTTAATGTGTATAAAATCCATGTATA
AATCACAAGTTTAGCAAAACGACAATGTCGAACCTAAAAGAAATATATGAAAAATGTGCT
GAATACACAGCATTTTACACTGGTGGAGATATACAATGGACTAATGATGGCACACAACTC
CTTTGCTTATGTGATGAAGTCATAAAAGTAATTGATGTTGACACAGTTGTTTCTGTTCTT
AAAATAGGTGAAAGTGATGAGGATACCGAAAATGATGAAATTTACACATTTAAACTATCA
CATAACAACCAAAATGTTGTTACTGCACACAAAAGTGGTCTTATTAAATTATGGGACAAA
GAGACAGGGGCCATGCAAAAAGTTTGGAGATCAGGTCATAAAGGTCCAGTTGCAAAATTA
ACATTTGATCCATCTGATGAAAACATAGCTTCAGGTGGTTCAGATGGTAATGTAAGATTA
TGGGATGTTGTCCACAACACATGTACAAGCAGCCTTCGAGGAGCGATGGGTGTCTTCTCT
GTGTTAGAGTATCACCCTGATGCAGCTAAACAATTAGTTTTTGGAGCTGCAGATGACACA
AAAATTAGATGTTGGAATTCAAGAACTGGTAAAGAACAAATGATCTATTCAGGCCATTTC
AGCAAAGTCACTTGTTTGCAGTTCACTATGGATGGAAAATACATGGTTAGTTCAGGTAGA
GACCGTGTACTGATTTTGTGGAATTTAAATGATAGCAAAGCACTTAAAGTTGTTCCAGTT
TATGAAGGAATTGAATCCTGTGTTATTTTACCATGTTCATTTAAAATCCCTAATTTTACA
AAGAAAATAGAAACTGATGGAGTTTATGTTGCTTCTGCTGGAGAAAAAGGAATAGTCAAG
GTTTGGAACTTATCAATGAGCAGACTTATGTTCGAACAAAAAAACAGTTTGGTGTCCCCA
TCAACAGAGGAAGGCGGACTGTCAATAACACATATACTGTTCAATCAAGTTAAGAATATG
TTATCTATAGTGACAGTTGATCACAACATAATTGTGCATGATCTAGAAACATTTGACTGT
GTAAAACAGATGATTGGTTTCACTGATGAAGTACTAGATATAATATTCATTGGTAAAGAT
GAAAGTCATATTGTTGTTGCTACTAATAGTCCAGATTTGAAGTACTATGAACTAAACACT
ATGAATTGTCAAATTGTAAAAGGTCATTCAGATATAGTACTTTCATTAGCACCATTTCCA
ACAAAACCTGATATGTTTGTTTCATCCAGCAAAGACAACAGTGTTAGATTGTGGCTTCAG
TCATCAAGCAATGTAATCAATTGTGTAGCAGTTGGAACTCGTCACACTGCATCTGTAGGC
TCTGTTTACTTCACAAACATCCAATGATTTCTTTGCTTCAGTGAGTCAAGATAAATGTAT
CAAAGTTTGGACTATTAATAAAGATATAGAGAATAGTACAGAGCAGAATCTTAAATGTAG
TCACACTGAATTGGCTCATCAAATGGATATTAACTGTGTTGCAATTTCACCCAATGATAA
AATGATTGCCACTGGTTCTCAAGATAAAACTACTAAAATTTGGTCTGAAGATTTGAATAT
GTTGGGAGTTCTTAAAGGTCACAGGAGAGGAGTGTGGTGTGTTAGATTTTCTCCAGTAGA
CCAAGTTGTATTAACATCTTCTGCTGACAGTTCCATTAAGTTGTGGTCTATAAGTGACTT
AAGTTGCCTAAAAACATTAGAAGGTCATGAAAGTTCAGTTCTAAAAGTTGAATTTTTAAG
TAAAGGGCAACAAATAATATCAAGTGGAGCTGATGGACTATTAAAGTTATGGAATATCAA
AACATCAGAGAGTAAAATGTCAATAGATAATCATGATGGTAAAGTGTGGTCATTAGCTGT
ATCTAAAAATGAATCAAATGTAATCACAGGTGGCTCTGATTCAAAATTGGTCAAATTAAA
AGATGTTACCTTAGAACAAAGAGAAAAGAAATCTAAGGAAAGAGAGGCACTGATTTTGCA
AGAACAAGAACTGAACAATTTACTTCATGATAAGAAATTAATCAAAGCTTTGAAATTAGC
TTTACGCATGGACAGGCCATTGCATGTGCTAAAAATAGTTAGTGAAGTGCTAAAAGGTGG
AAGTGAAAAACTTAGAGAAACTTTGAAAGAAATTAATCACACTCAGAAAGAAACTTTGCT
GAAATTTGCAGCTGAGTGGAATACAAACAATAAAAATTGTCATGCAGCACAACTAGTCTT
CAATATATTAGCACCAGAAATTATTTCTGACAATTTAAAAGTACCCTCATTAGCCACTTT
TATAGAGGGCGCTTTACCATACACAGAAAGGCATTTTGAGCGTTTAACGAATCTGCTTCA
GGATCTAAACTTCGTTACTTATACTGTTAATTGTATGCAACCACACTCCCTCAATTTTAA
ATAATTGTTAAATTTACAAAATTAAATATTTTTAATTAAATATGACTACAACAGAAAGGC
ATTTTGAGCGTTT
(2653 bp)

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