SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp25981_c0_seq3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_NF-kappa-B_essential_modulator_isoform_X1_[Bombyx_mori]
Ontology
GO:0002230 P positive regulation of defense response to virus by host
GO:0002376 P immune system process
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006955 P immune response
GO:0006963 P positive regulation of antibacterial peptide biosynthetic process
GO:0006964 P positive regulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria
GO:0008063 P Toll signaling pathway
GO:0008385 C IkappaB kinase complex
GO:0019730 P antimicrobial humoral response
GO:0030163 P protein catabolic process
GO:0043122 P regulation of I-kappaB kinase/NF-kappaB signaling
GO:0045087 P innate immune response
GO:0045089 P positive regulation of innate immune response
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0050829 P defense response to Gram-negative bacterium
GO:0051607 P defense response to virus
GO:0070530 F K63-linked polyubiquitin modification-dependent protein binding
GO:2000647 P negative regulation of stem cell proliferation
Transcript
Level		FPKM:1.79 TPM:1.50
ORF EntryO_TrvaMG10901_complete:A_TrvaMG_comp25981_c0_seq3
Sequence
(Nucleotide)
GATGGCCGCCCAGAAATTGTTTCGCTAAAACAAGAAGTACAATTAATATCTTAAATACAC
GCTTTTGAGATCCTGACTCATCATTTAGACGTAGAGCCACAAGTAATTGTTTTATTTTTA
TTATTTTTTTTCCAGAATGCTTGTTTTGTTGCATGCTTAACAGTAGGTTAAATATTGTAT
TTATTAATTGCTTGTATCTCATGGTGCATGGAGTCGCTCCTGATGTGGTTCTCGCGTGGA
ATCGGAAGGGTCCAGCTGAAAATCAGCGCTGCAGCTGTCCAGGCTGTAGCTTCGTGCTGA
GCTGGTCGCCCTTTCAGTTACACCCTCGCACATAACCTTTTATTTCATTCTTTGTTTTAA
TTTTTTTTTTTTTATTACTTTTATATTTTTGTTTGATCTTAGTTATAATCTTTGTTAGTA
ATATATGTTCCTGTTATGTGTAAGTTGTGTTTCTGAATAAACGTATTTTCTTTCTTTCTT
TCTATTCCATTAATGAATTCTTTATAAAAACTTAAACCACTTCTGGTTCATAATATACAT
ATTTAGGCGATAGTATGCAACTGTCTACCTAACTTTATCGCGTACACACGAATATTCGCC
GCAACACGCTAATTTCATTACTAAAACAAAACAAAAAATACAATAGTGATACCTTATTTA
GACAGTTGGTCTTAAATATTAAAAATCGTCAAGACAGAAGTCGAAATGGTCCTCCATGAC
TTTGTACTGGTCGCATGAGAAACGCATGCATTTCGGGCATGTGTACACCATGTTTCCAGC
ATTAGTAGTAGGCGATGGTGCGGATGTCTGTCTGTTTGTTGTAGGAGCGGATCGCTTGGT
TGTAGCTCTTTGGTATACACTTGGATTTAACTTGCGAACCTCTTCTAGCTGTTGCGTTAA
TTCCTGATTTAATCGTTGACTTTTCCTGAGATCTGTTTGTAAGGTTTCCTTCTCGCTCGC
CATTTTCTGACGAGACTCACGTTCCGCTTCGAAGTCACTCCTGTACAATTCAAGTTGTGC
TTTCAAAAGTTCTATATCATCTTTTTCAGCTTTTAATTTATTAACTTCCGCTTCTAAAGC
TTGTAGTTCCTGTCCTCTGGCGACCAGAGCTGAAGTCAACATCTCCATGTTTGGCGTATT
GTGGTTCGTTTGTTCTTTAGTCGAGTTTTCTAATATTTTACTGCAATCTTTAAATATTCC
TTCGAATATAGACAGAGTTCCTCTTACTTGACCAATATTACTAAGTACGTTGCTGTGTTG
TTTTTCTAACTGTTGTTTCGCCTCGTTGAGACCAGATTTGAACTGTTCAGATGTGGTTCG
TTCAAGTTTGTAATCGCACAGGCTGCCTAATAAACCTACTGTTTCTACTAAACTGTCGGA
TAACCCATAAATCAATACATTCAACAGCTCAGCGAGATGCTTCAACGTTCTATCGTAAAG
TTTGACGTTAGAGTTGACATTACTGTCCGATGATTCAGACATGTTTAGAGAAATACGAGC
CGGCTGGAATACCGTAGTGGATGCCTCCTTCAATCTGTTTTGTAGATCTTGTATTTGTTC
TTTGTAAATTTTGACAGTTTCGCAGACGCCAGATTTATGTTTGCTGAATTGCAACTTAAC
ATTTTCCAGATCCAAGATCTTTAGTTGTGAGTTTTTCAAATCGTTTTGCAGCGAAGACAG
TTTATTTTCCAATTGTTGTATTATTGAATCGCGACGTTTCATTTCTTCTGACGACATGCT
TGTATTGCTGTTAATTGATAACATCTGATTATTTAGTTCTCTGATAGTGTAATTTAATTT
CTCTATTTGAAGTCCATATTCACTGTCTTTAGTTAGTAGTTGAAGCTCGAGATTTTTTAC
TTTTTCTTTCAAATCGTCCCGTTCCTTTGAAGTTGCGTCGACAATGTGTTCTAAAGACTC
TTTTTGCCATGTCAACTTTTCATTGTCGACGATAACCTGCCTCCTCTGTTTTTCGACTAA
AGCAAGTTGCGCAGTTAATTTATTAATGGTGTCGTCATCGGGGGCCGAGACGAACTCCAC
AGCGGAAGGCGGACCGGACCTGAGGTCTCCGTTCAAGGATCTGTCTTTAGTGTTGTCGAA
GCGTTGGATGTCGAGCTTCAGTCTTTTGTTTTCAAGACGGAGCCTTTCGATCAATTCCTT
CGTCTCCTCAAACTTCTCCCTATGAAGCTTCTGAGTGTTGATCATATCGTCTTGACAAGA
AGCGATCATTCTGAACTGCTCTTTCATAGAATCGTTGTTCTGTTTCAAAGCCTCCTTCAA
GATGACGTTCTCGTCAAGGATCTCGCCGAACTGTTTCTGAAGTTCTTCTGTACTCTTGTC
TTCGGTCACCATGGTGCTGGCTATCATCATGCTTGCTGGTGAGGGACAATCTCCCAAGTT
GAAGTGAGCCTTCCAAGCCATATTAGCTTCAGCCGGGAGATCTTTCATCGCCTCCTCAAT
TTGTGCATGATCCAAAGACATATCTCCGTTCTGTATCCCGTCACGTTTCAGGTCCATGCT
GGAGCCCGGTGAAGTATCCAGGATTATAAAGGATTCATCGTCATGACTTTCCGGTTTAGA
TGACATTGTTTATCTTTGTAAACGGCGAAAGTTTCATCAGAACGGAGATAAAAAGTATTT
ATCAGTGGCGTAAATATGATTTTTACGCAGCACCGGCAAGTCACAGGACTGACGAATGAA
TGTTTCACAAACGCATATTATGTATTCACGTATTAATTAACACTTTACCATGTAATTCTA
TATGAGCGTGGTATTTACTTTTATTTTTGTAATGATAAAAATGAATAATTTTAGGAAATT
GTTGTAATCTAG
(2832 bp)

- SilkBase 1999-2023 -