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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp25981_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_NF-kappa-B_essential_modulator_isoform_X1_[Bombyx_mori]
Ontology
GO:0002230 P positive regulation of defense response to virus by host
GO:0002376 P immune system process
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006955 P immune response
GO:0006963 P positive regulation of antibacterial peptide biosynthetic process
GO:0006964 P positive regulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria
GO:0008063 P Toll signaling pathway
GO:0008385 C IkappaB kinase complex
GO:0019730 P antimicrobial humoral response
GO:0030163 P protein catabolic process
GO:0043122 P regulation of I-kappaB kinase/NF-kappaB signaling
GO:0045087 P innate immune response
GO:0045089 P positive regulation of innate immune response
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0050829 P defense response to Gram-negative bacterium
GO:0051607 P defense response to virus
GO:0070530 F K63-linked polyubiquitin modification-dependent protein binding
GO:2000647 P negative regulation of stem cell proliferation
Transcript
Level		FPKM:0.20 TPM:0.17
ORF EntryO_TrvaMG10900_complete:A_TrvaMG_comp25981_c0_seq2
Sequence
(Nucleotide)
AGTGTCTGAATAAGTTTATAACTACATAGTTCTTTATCGGTAGGGTCCAGCTGAAAATCA
GCGCTGCAGCTGTCCAGGCTGTAGCTTCGTGCTGAGCTGGTCGCCCTTTCAGTTACACCC
TCGCACATAACCTTTTATTTCATTCTTTGTTTTAATTTTTTTTTTTTTATTACTTTTATA
TTTTTGTTTGATCTTAGTTATAATCTTTGTTAGTAATATATGTTCCTGTTATGTGTAAGT
TGTGTTTCTGAATAAACGTATTTTCTTTCTTTCTTTCTATTCCATTAATGAATTCTTTAT
AAAAACTTAAACCACTTCTGGTTCATAATATACATATTTAGGCGATAGTATGCAACTGTC
TACCTAACTTTATCGCGTACACACGAATATTCGCCGCAACACGCTAATTTCATTACTAAA
ACAAAACAAAAAATACAATAGTGATACCTTATTTAGACAGTTGGTCTTAAATATTAAAAA
TCGTCAAGACAGAAGTCGAAATGGTCCTCCATGACTTTGTACTGGTCGCATGAGAAACGC
ATGCATTTCGGGCATGTGTACACCATGTTTCCAGCATTAGTAGTAGGCGATGGTGCGGAT
GTCTGTCTGTTTGTTGTAGGAGCGGATCGCTTGGTTGTAGCTCTTTGGTATACACTTGGA
TTTAACTTGCGAACCTCTTCTAGCTGTTGCGTTAATTCCTGATTTAATCGTTGACTTTTC
CTGAGATCTGTTTGTAAGGTTTCCTTCTCGCTCGCCATTTTCTGACGAGACTCACGTTCC
GCTTCGAAGTCACTCCTGTACAATTCAAGTTGTGCTTTCAAAAGTTCTATATCATCTTTT
TCAGCTTTTAATTTATTAACTTCCGCTTCTAAAGCTTGTAGTTCCTGTCCTCTGGCGACC
AGAGCTGAAGTCAACATCTCCATGTTTGGCGTATTGTGGTTCGTTTGTTCTTTAGTCGAG
TTTTCTAATATTTTACTGCAATCTTTAAATATTCCTTCGAATATAGACAGAGTTCCTCTT
ACTTGACCAATATTACTAAGTACGTTGCTGTGTTGTTTTTCTAACTGTTGTTTCGCCTCG
TTGAGACCAGATTTGAACTGTTCAGATGTGGTTCGTTCAAGTTTGTAATCGCACAGGCTG
CCTAATAAACCTACTGTTTCTACTAAACTGTCGGATAACCCATAAATCAATACATTCAAC
AGCTCAGCGAGATGCTTCAACGTTCTATCGTAAAGTTTGACGTTAGAGTTGACATTACTG
TCCGATGATTCAGACATGTTTAGAGAAATACGAGCCGGCTGGAATACCGTAGTGGATGCC
TCCTTCAATCTGTTTTGTAGATCTTGTATTTGTTCTTTGTAAATTTTGACAGTTTCGCAG
ACGCCAGATTTATGTTTGCTGAATTGCAACTTAACATTTTCCAGATCCAAGATCTTTAGT
TGTGAGTTTTTCAAATCGTTTTGCAGCGAAGACAGTTTATTTTCCAATTGTTGTATTATT
GAATCGCGACGTTTCATTTCTTCTGACGACATGCTTGTATTGCTGTTAATTGATAACATC
TGATTATTTAGTTCTCTGATAGTGTAATTTAATTTCTCTATTTGAAGTCCATATTCACTG
TCTTTAGTTAGTAGTTGAAGCTCGAGATTTTTTACTTTTTCTTTCAAATCGTCCCGTTCC
TTTGAAGTTGCGTCGACAATGTGTTCTAAAGACTCTTTTTGCCATGTCAACTTTTCATTG
TCGACGATAACCTGCCTCCTCTGTTTTTCGACTAAAGCAAGTTGCGCAGTTAATTTATTA
ATGGTGTCGTCATCGGGGGCCGAGACGAACTCCACAGCGGAAGGCGGACCGGACCTGAGG
TCTCCGTTCAAGGATCTGTCTTTAGTGTTGTCGAAGCGTTGGATGTCGAGCTTCAGTCTT
TTGTTTTCAAGACGGAGCCTTTCGATCAATTCCTTCGTCTCCTCAAACTTCTCCCTATGA
AGCTTCTGAGTGTTGATCATATCGTCTTGACAAGAAGCGATCATTCTGAACTGCTCTTTC
ATAGAATCGTTGTTCTGTTTCAAAGCCTCCTTCAAGATGACGTTCTCGTCAAGGATCTCG
CCGAACTGTTTCTGAAGTTCTTCTGTACTCTTGTCTTCGGTCACCATGGTGCTGGCTATC
ATCATGCTTGCTGGTGAGGGACAATCTCCCAAGTTGAAGTGAGCCTTCCAAGCCATATTA
GCTTCAGCCGGGAGATCTTTCATCGCCTCCTCAATTTGTGCATGATCCAAAGACATATCT
CCGTTCTGTATCCCGTCACGTTTCAGGTCCATGCTGGAGCCCGGTGAAGTATCCAGGATT
ATAAAGGATTCATCGTCATGACTTTCCGGTTTAGATGACATTGTTTATCTTTGTAAACGG
CGAAAGTTTCATCAGAACGGAGATAAAAAGTATTTATCAGTGGCGTAAATATGATTTTTA
CGCAGCACCGGCAAGTCACAGGACTGACGAATGAATGTTTCACAAACGCATATTATGTAT
TCACGTATTAATTAACACTTTACCATGTAATTCTATATGAGCGTGGTATTTACTTTTATT
TTTGTAATGATAAAAATGAATAATTTTAGGAAATTGTTGTAATCTAG
(2627 bp)

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