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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp25979_c0_seq4
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_DDB_G0292642-like_isoform_X3_[Papilio_polytes]
Ontology
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007249 P I-kappaB kinase/NF-kappaB signaling
GO:0008270 F zinc ion binding
GO:0009898 C cytoplasmic side of plasma membrane
GO:0010803 P regulation of tumor necrosis factor-mediated signaling pathway
GO:0016874 F ligase activity
GO:0023035 P CD40 signaling pathway
GO:0031625 F ubiquitin protein ligase binding
GO:0035631 C CD40 receptor complex
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043130 F ubiquitin binding
GO:0046872 F metal ion binding
GO:0050852 P T cell receptor signaling pathway
GO:0051092 P positive regulation of NF-kappaB transcription factor activity
GO:0071797 C LUBAC complex
GO:0097039 P protein linear polyubiquitination
GO:1903955 P positive regulation of protein targeting to mitochondrion
Transcript
Level		FPKM:2.58 TPM:2.17
ORF EntryO_TrvaMG10897_5prime_partial:A_TrvaMG_comp25979_c0_seq4
Sequence
(Nucleotide)
GCCAGCTCCACCGCCACCTGCACAAAAACAAAATGAAGAACAAGCAACAACATCACAAAT
ATTACCAATCGTGGAGAAGAAAAAGAATTACTTCCGAGAGACATGTCGAACTGAAGATGA
ATGGACAGAAAGTGATTCTGACAGTTCTCAACCCGCAATGAGGAAACCGATTGAAGAAAC
TAATCACAGACCGCCTTCACCTCCTCCACCACTCACACTTCGACGTGTCTCAGGGCAGCT
GATTGATTTGGCCAAAATAAGTTTACCCGATGGCTCACCAGAGAGACAAGCTCGTATGTT
ATTAGCAGAAGGCGCTACTGAAACTTGGGAACAAGCGCAAATCGCAGTAGAATTAATATC
TCGGGGAATCGAATCGTCAGCTGCACTTTTAGCAGCTCTGGAGTGCACAGATATTACAAG
CGCACTTGCATACTTACATCAAGATTGCGAACTATGTGCTTCACGACTGCCTGAACATGA
AATGGTATCGATGTTACGATGTACTCATCGATGTTGCCGAGAATGCGCTCATCATTACTT
CACCGTTCAAATCACGGAGAGGAGTATAGCAGACTGCGTCTGTCCGTACTGTAAAGTACC
AGATCTAGAAAATCTTCCTGAAGACGCCTGGTTAGATTACTTTGCACATTTGGATATACT
GCTAAAGACTTTACTTGAAACTGAAGTTCACGAGCTATTTCAGAGAAAGTTGCGTGATCG
TACCCTGGCTCGGGATCCCAACTTCAGATGGTGCATGGAATGTGCTTCCGGATTCTTCGT
ACATCCTAAACATAAGAAATTACGTTGCCCGGAATGCCGTTCAGTCAGTTGTGCATCCTG
CAGGAAACCTTGGACAGCCAATCATGAAGGTATTACATGCGAACAATATGCTACATGGTT
GGAAGACAATGATCCTGAAAGATCGTTAACAGCTATACAGCAGCACCTGAAAGATAATGG
TCTCGAGTGCCCTCGCTGTCACTTCAAATATTCACTTTCAAGGGGTGGGTGCATGCATTT
CACTTGTACTCAATGTAAATACGAATTTTGTTATGGATGTGGGAAGCCATTTACAATGGG
TGCACGATGTGGTTTGAGCGACTACTGCGCTAAACTAGGACTTCATGCGCATCACCCGAG
GAACTGCTTGTTTTATTTAAGAGACAAGGAACCGCACGAACTGCAAACTCTATTACAAAT
GAACAATGTAAGTTATGAAACGGAAGCTGCACCTGGTAGTACAGGGCGGTGTCCGACACA
ACTACAGCGCGAGACTCCGACCGGCCTCGTCGACGGAGTGTGCGGCAGTGAAGCTCCGGC
CAACTACGCGGGCTTGTGCAAGAACCATTACCTGGAGTACCTGAGCCGCACGGTGCGGCG
CCTCGCGGTGGACCCGCTGCCGATCCTGGGCGTGGACGACCTCGAGACGCTGGTGCGGCG
CGCCGCGCTGCGTCTGCCGCCGCGCCCCTACGGCTCGCTCGAGGGCGTCTACAAGCGGGG
CCTGGTCGAGATCGTAAAAGAAAAAATACCTCTGGACTAATTTCTACTGGAATTCTGCTT
GAAGTTCTTCAAAACTTTTCCAACTTTATAAAAATGTGTAACAATAATAATTATAAGTAT
AAATTAAATAAAGTTTGATATTGT
(1644 bp)

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