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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp25960_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_HEAT_repeat-containing_protein_1_isoform_X2_[Bombyx_mori]
Ontology
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0009267 P cellular response to starvation
GO:0022008 P neurogenesis
GO:0030515 F snoRNA binding
GO:0030529 C ribonucleoprotein complex
GO:0030686 C 90S preribosome
GO:0032040 C small-subunit processome
GO:0034455 C t-UTP complex
GO:0042254 P ribosome biogenesis
GO:0045943 P positive regulation of transcription by RNA polymerase I
Transcript
Level		FPKM:1.48 TPM:1.24
ORF EntryO_TrvaMG10841_3prime_partial:A_TrvaMG_comp25960_c0_seq1
Sequence
(Nucleotide)
GTTTGAAACAGAGCAGTTTTGATAATTGGCGTTGTCTTTTGGCAGGTATATTACTATTGG
AACTCATAATTGCTGTTACAACTTTGTCGAACGCGTCTGGGTATTGACGCTCGACATTTT
TAAGTAGTAAGGCGTACCAGCTGACGATTTTTGATGAGCAAGAATCATCATCAATGATTT
CAATATCACTTTCGTTACCATCTTCATCAGCTTCTTGAATATCAGTTGTGGGCTGGTATG
CTTCCAATATACACATGATAATTTTCTCTGGATCCTGATTTTTTAAATCAACTTCCTGTA
TCAGTACATCTAGTAAGGGACTGTAAGTTTTGAACTCTTCAATGTCTGTTTGAACCAATG
GTAACACTTTTCTTAAAAACGCCATCACAAACGGTTTGATGTTGGTCTTTTTCTCTACCA
ATACTTTTATATGACCACAGAAATTGTGCATCATGTCTACTGATACATTAAAAATAGCAT
CAGACATTTCGGTCACATGTGTTTGATGCTCATATAACATAACTATGAGAAGTACAACAT
CATATGATGGATCAAATTCGGTAGTAAGCAGTCTGTCCAAAATCTGGCTAAGAGTGCTTT
CTTTTAACTTTGTTTTCGTTAACAAATAACCTATTGTGATATAACACGATGCTCGGAAGT
CTACGATCTGTGATTCAATGCCTTTTACAAGTGTTGGAAGTAAAGCTGTGATTATACGTT
CACTAACGTTTTTTACAGAACTTATAGTACCGACAGCTACTTGACAGAAGAAAGCGTAAA
TCGTATTTAGCTGTGTAGCTCGTTCTTTATACTCTTGAATGTAATTGAGCACCATTCTAC
CTATAAATTGCAGAGTACCGATGTTTGAAGCACATTGGTTGTACAAAACTTGGTTTCCTA
AAGGTACTCCATTTTTCTGCATTGGTATTAACCAAGACCACTTGTTAGTTGCCGTTTTAA
GGCGCATCAGTTGAATGCATCGAACAAATATCATGGTGCTATGGTACGGAAGGATTAAAG
CCATCATAGCATCTTGGTTATACTCATGTACGTGATATCTATTTACTAACCATTCTAAAG
CTTTATGTGCCGACGTCAAGAGGAAATACGGCGACAATTGTAGTAGAAACTTCTCGATGT
TCTGATCCAAGTTTTGATTCACTTCCTTCGACTGTACTGCTCTTTCAAAGTCTTTGGATG
AGATACTGAACAATGTCTCTTGGTATATGGAGAAATCGGGACTTAAGGCTATGAGCTCTT
GAAGGCCGCTTAAACCAATCTCGTGGAAGGTTTCACGGTCTTTTAAAGCCGCTTCGGAAG
GATCAAAAAGCAGAGACACTTGCTTTGTTGATTCTCTGTAGATCGATGACTGTGGCGCTT
TCAGCTTCTCCAGCTGCTGCGATAGAGAGGTAGCCGCCATGGTCGAAGGTTTTATTCACA
GTTTGTATTTTACGGTAGTAGTATTGATTGTATGGTTGTAATATATTTGCCTAACTTATG
TTATTTCAATGACTACGTGAAGGACTCATAATATGATAACAATTATATTAAAATCTGATA
AAAACAAACCCCTGTGTTTT
(1580 bp)

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