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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp25934_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_transcription_initiation_factor_IIA_subunit_1_[Amyelois_transitella]
Ontology
GO:0001094 F TFIID-class transcription factor complex binding
GO:0001128 F obsolete RNA polymerase II transcription coactivator activity involved in preinitiation complex assembly
GO:0001129 F obsolete RNA polymerase II transcription factor activity, TBP-class protein binding, involved in preinitiation complex assembly
GO:0005634 C nucleus
GO:0005672 C transcription factor TFIIA complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0017025 F TBP-class protein binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051123 P RNA polymerase II preinitiation complex assembly
Transcript
Level		FPKM:11.16 TPM:9.40
ORF EntryO_TrvaMG10779_complete:A_TrvaMG_comp25934_c0_seq1
Sequence
(Nucleotide)
GTAGACAATTGTCAAAATTTTTGAGCTGATTTTGTGGTATTAGAAGAATCTTTTATAGTA
AATGGGCATGATCGCTGTTGAAACAATTAACTTATGTAAAAATTAAATAGAAAAATTGAA
CACAATATCAGTGTATTATCCTATAGTGTGAATCAAGAAATTTGACATTGAATTGTTGAG
ATGTGAACTAAGAAGTCTGGTAATCGGTTTCAATCAATATTCTGATTTAAAAACTAAAAT
ATATGGTTAAAGAGAAATCTAAACTGGCACAAGGTTATTTCAACTTCAGTGTGACGGCAA
AATGGCATCCAGTCAAGTAACAGTGTTGAAACTTTACACCGCAGTTGTAGATGACGTTAT
ATCAGGAGTAAGAAACTCTTTTTTAGACGACGGAGTAGATGAACAAGTTTTGCAAGAATT
GAAACAACTATGGAAGACAAAACTTCAAGCCAGCGGAGCCATGGACGCGTTACAACCCGA
ACCAATGCTTCCACCGCCACCAGTCCTTCAAAATTATCACAAAGCAAACGGCAGTAATGT
AGTGCACAAAAGGACTGATATGGGACACACGTCAAGCCAGTCTGATCATAGTACACCAGC
ATCCAATGTAGCTGGAACTCATGCTCATCACATCATAGATCCAAATAATAAAGTTCCAGT
TCAACTAACACTACCAGCTCAGCCCGGAGTCCCTGGATCTCAACCACGTTCCTTCACTAT
ACAAATTCCAGCATCTGCACTGAATGGTAATAAATTGCATCAAGTTCTGACAGGACCTAT
TATAAATGCTACTATAAGCCTTCCACAACCTTTGGCTGCAACATTGTTACAACAGCACAT
AAATTCTGCTTTAGCAGGTCAACAAAGTGAATTTGATAGCGGTGGAGGTGGTCGCAGTGG
GGCTGCACCTTTCTCTTTGGACGGTGCTTTAGATTCTTCTGATGATGACGGCTCAAATAA
TGGTGACGGATCAGAGGATGGTGCCGGAGATGATGACGATGATGATGATTCTCCTGAGGA
GCGGGCTGAGGAGGAAGAGGAAGAGCAGAATGAAAGTGGTGGTGCTGAAGAAGAACCCCT
AAACTCTGGTGATGATGTGTCTGATGAAGAGCCAGGAGATATGTTTGATACCGACAATGT
TGTTGTCTGTCAATATGATAAAATCACTCGCAGTCGTAACCGGTGGAAGTTTTACCTTAA
AGACGGCATTATGAATCTAGCAGGCAAAGATTATGTATTCCAAAAAGCCAATGGTGATGC
AGAATGGTGAACTTTTAGTGTATTTCATAGAAACTAATTTGTTATAATATATTTTAACTT
AATGGGTATTACTAATTTACAAAAAATGGTGGCAAACAGTTTGTGATCCGAAGTATTTTC
AATAAAACTGCCCTTTACTTGAAATACTATTATAATTAAACTTGTTTTGTGACACTGTTT
TTGTTTCATAAAACTGATTATACAGTTTATTTTCCTAAGAATAATATGATCTTTTATGAT
GATATCTATCCGTTTCT
(1517 bp)

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