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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp25924_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		RNA_binding_region_containing_protein_1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006397 P mRNA processing
GO:0006977 P DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest
GO:0006978 P DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator
GO:0007050 P regulation of cell cycle
GO:0008285 P negative regulation of cell population proliferation
GO:0008380 P RNA splicing
GO:0010830 P regulation of myotube differentiation
GO:0030154 P cell differentiation
GO:0043484 P regulation of RNA splicing
GO:0044822 F RNA binding
GO:0070935 P 3'-UTR-mediated mRNA stabilization
Transcript
Level		FPKM:6.63 TPM:5.58
ORF EntryO_TrvaMG10758_complete:A_TrvaMG_comp25924_c0_seq2
Sequence
(Nucleotide)
GACGGTCGCCCGCCTATACGCACTCCAGTGTTTACAAGTGCACTCGCGTGGCTAACAAAC
TTGAAGACCGCGCTCGCGGCAGTGATAGTGTTTGAGTGCAAAGGTGGCCGGCGCAACGGA
GGCGGTGCAAGGAATGTTGATGGCGGGCGCTCTGCCGGCCGAGTCCGAGGGGCTTCTGGC
TCTGGGCGCGCTGCCCGGCCAGAAGGACACCACCTGGACAAAACTCTTCGTCGGGGGTCT
TCCGTACCACACAACCGACAAAAGTCTCCGGGAACATTTTGCGGTCTACGGCGATATTGA
AGAGGCAGTCGTCATCACAGACAGACAAACGAACAAGAGCAGAGGATATGGCTTCGTAAT
AATGGGCGACAGGACGGCAGCTGAACGGGCGTGTAAGGATCCAAATCCCATCATAGATGG
AAGGAAGGCCAACGTGAACCTCGCCATACTTGGAGCCAAGCCCAGAGGAAACCTAGCACC
AGGGTTCGGGCTGGCTGCGGCGGCAGCGGCCGGAGTGAGGGCGGGCTACCCGACAGTGTT
ACCAGCACATTATGGGTTGTCCCCCGGTTACGTGTACGGGACACCGAGTTACATGGGAGC
TATGAGCGGGGTGGGTGCAGGAGTGGGCGGAGGCGCTGGTGGATTGGTCCAGCTACCTCA
GTTGCAGCACGCGGCCGCTGTTGCTGCAGCCAACCATTTATATGAGTACCAAGCAGCTGC
TGCCCAGGGCGCGGCGGCGTATCAACAGCAATACGCGGCTGCTGGCTTCGACCCGTATGC
TACTGCTGCAGCTGCTGCAGCGACTGGTGCTGGTTACGTGTCTCCATACTACGCGTTACC
AGGAGGAGGGGTTCAAGGACCGTTACTACCACCATTGCCGTACCCCCCACAATTACAAGA
AGCAAGAATGCAGTAGATTGTTAACCTTAACTACGTTTGTGTCTAAACTTGGTCTGTATT
GGTAAATACAATTACAAATTTAGAAAAATATTAGAAATGTCGGCTGATAGTTACTTTTTA
TTACATCTTTAAAAACAATTTCAATGGTAGACTTTGGTTGAGATTGATTTATTAATACAG
GCTTTACAGGGATCACAATATCAAAATGGCGACGATAGAGACATAAAAGCAGACAACTCA
GTCTGTTCTTCTCTTAGACTAAAACAGAATTTACCAGCTAACAATTTGAAGAATTGTAAT
GTTTTTTAGTGATTCTTTATAAAATGTATAGAAATCACAAATGTAGTTTTGAAAGGGAAT
TGTTTTGAAGAGCGTTAGATTAAGGAATCTTATTATGGATCATAACATACAGCAGTATGA
AGCCAAATAGAAGTAGATGGATCTAGATGACTTAGTTCTATTAACCAAATCTAAGTATGA
CCAAAGCTATAAGCTTTTTAGATAAGGAACTATTTGGGTACAGTGGCCAGTAATGTAATA
GTAATGTTCTTATTTTAAATTTTGAATCTGTAAAATAAATTTACGTGAATTATAGATTAT
TAAATTTCTTTTTTTTTTTTCATAAATTACCGATAAATAATTAAAGTAACATTGCTACAT
ACATTTATTTTACAGATTCTTTATATTTAGGTAGACGAGATACTTAGGGACAATATAATA
GAATGATTTACTTGCCATTTAAGATGGTACTTTCTTGCCTCTAAAAACGTTAAATTTATA
AAGATATATATTATTTTCATGTCTACTATTAGTTTAAGAAACATCTAGAGGCTAGATAAT
GCACTGTAAAGAATTTTAGCTAATTCAAAACAGTCTTAAAACAGAATTATGGGGTAATTT
TTTTAGGTTATGTGAGGTAAGACTTAACAGTAAAATTACCACTGTAATTGATCATATTAA
TATTATTCAAACACCAGTGCTGTATTATTGTATTGTTATTATAAAGTTAATCAAATGACA
ACATAAAAAGAAAACAAAATAATAATCAGTAACATGCCTAGTCTTACCTCAAGTTAGGTA
AGGGGTTACCTAAATAAAAAAAATAAAAAATAAATTCATCAAAACATTTCGTTTTATCGT
CCACATTGCTCAATAAGCCCAGTGTAGGGCTTCGTTTAGCTTAAGATGAAGAGCAATAAG
GAATATAGTGTATGACCTATAATATAAGTTAACTTACTTATTTTTAGTATTTACCCGTAT
AATTAATTATAGTTGCTCCAAAGCGGTATAGGGTACTTACTAGGTAGAATAATTATTCAA
TTACTAGTCCGTGTAATTTTTAATTTAATGAGGTTCGTGTGGTTGACTTTTCTGGTAACT
TTACCCTATGGGTACTTTGTCTATGGATGATTGGGTAAATTGGTATTGCGTCTGACTTCA
TAGTATAAAACTAAATCGCTCTTTTGTCTGACACTATGTATGTTTATATTTTTAAAAGTG
AAAGATTTATATGTATAATATATTTAAGAAACGCCGGCCTGTTGATAGGCGACGGGTCTT
AGTATACTTTCAAAAACGAAAACTAAGTAAAATATTTAATGATTTCTTAAACAGTTTCTA
GAGCGACAGAGTCTACTTACTATGCGGCTTGCTTATCTTAGCAGTTCAAGTAATTTCGGC
TGAATAAGATGGCAACATTTACCCTAATCCATAGATTATCTGTCATTTGACAGTGACAGA
TGAAAAGTTCAACCATCGACATAGAAGTAATCAGTGAATCGAATAGATCACTGCAATTAG
TCTGTAAGTCTATCTAATAATAATATTATACTGTTATTTCGTAATTTATTTTGTTGATAT
TTGTAAATCTACATGTTGATAACTATTTATTATGGAAAGGAAAATTGTTAAGTACCGACC
GTGGAATGGTTCGGGAATATCTTTAAGTGAAGGTACATTACACATAATTAAAACTATAGA
TAAAAGTGAAGAATAACGTCGAAATAAATATTTTTATAAAATATGTTTAAAAATAACACT
ATAAACATAAATCCTATAAAAGTGGCTCTCAGTACATATAAATAAAATATTTCCGAATAG
AATTATGTATTACATATTATAGTATTAGTAGTATAGATATCATAATTGTGCCTATAAAAG
TGAGTTAAGGGGGCATTAAAGGCAATAATTTTAACAAAAAATCTCAGCAATGTTTTAAAA
CATGTTAGACAGAGAAAGCACTAGTGCGTTATGACGTAAGTCATACATTTGACACTTAAG
AATGAAAGAGAAAACATCTGTGTCACAGTATATGCCCTCTTTACTTACAATACACATACA
GAAACCAAATGGAACATTAAATGTTAGCCATAGTAAGTGGCCATCTTGCCTTAATACAAA
TAAGAATTTATTATTAAAGTATGTATAACAATGATGTTCGAATTATAAAAGTTACTAAGC
TATTCAAAGGGACACATTATTCAATTTAGCAGTGTAAGATACAAATTTAATACAATACAA
AATACAATGAATGTAAAGTAAACTAACACTGGTTACTTTACCTAGTTCATGAATGAATTT
AAACACAAAAACAAAACTATTTGGTAGTCAAACTGAGCATTAAAAAAATGTTTAGTACAA
AAAGTTCCCACTAGGTCAGTATTTTATAAATCGAACTACAGAATTGTACATTCATACAAT
ACAGATATTATATTTTATATATGTGACTATTTACACATATCAAAATAAAT
(3650 bp)

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