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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp25919_c0_seq4
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC106130010_[Amyelois_transitella]
Ontology
GO:0000715 P nucleotide-excision repair, DNA damage recognition
GO:0000784 C chromosome, telomeric region
GO:0003684 F damaged DNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006281 P DNA repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006974 P cellular response to DNA damage stimulus
GO:0031848 P protection from non-homologous end joining at telomere
GO:0035312 F 5'-3' exodeoxyribonuclease activity
GO:0036297 P interstrand cross-link repair
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:2.22 TPM:1.87
ORF EntryO_TrvaMG10741_complete:A_TrvaMG_comp25919_c0_seq4
Sequence
(Nucleotide)
TGTTTGCGAACTTTTCTCAAAATTATTAAGTTTTTCTTGTTGTTTTTCGTGTATTTGTGT
CGGCTTTTGTGTTTGGTGTTGGTTTATTTGTGTTGTGATTGTATTTGTAACACTAAAGCC
CGCAATAAGAATACTGTATTTAAGTATTTAGTATAATAAACAAGTTTTGTTTAATTTGTA
AATTTCTATTTAATCAGAAAAGTCCAGCAGGTTTTCCTGTTACAAGACATTGGCAGAGTT
GTCGTCGTATATACTGACGGCAGGGCGCCATAAATAAAGCGAAGAAGAAGAAGAAGAAAA
AATTGAATTTTGAACAACAATGAAATTGTTTGAATTTCTCGATTTGTGTACCTCATAAAT
CTTAAACGCTTTAAATGTAATAATGAGCAAGGAAGATGATATAAATAATTACGTACCCTC
ATTGCTAAACCCACGGCGATACCCAAAGAGTGATTCAAATCAGCTAACACAAAATTCAAT
TACAAGCCGGTTTTCACTGTCTCTTGGATTAAAAAAATCCATCACTTCGTTTAAGGATAA
GAAGAAATCGCAAATAAGTGTCGGTAATAAAGAAAATTCGAGTAATGTCTGTAACGTGGA
TCGTCAAGCAACTGTTTTGAATGATGCTGAAACAGTTATTTTAAATACTCAAGATACAAC
TGATTTAAGCTTCTCTTTTATTGAGAACTCGCAAAGAAGTTGCATTAAAAAAATAGTTTC
GAATGTTGAAAGTACAGCTGAAGCTGATGATCTTCATGATCTAAGTCATGATACGATTTT
GGCAGATACCGAAGACTGTATTGGCGAAAAAGAAAATGACGACACACTTTTAAACACTGC
CAGACCACTTATAGAAGTTTCGTTTTCCATAGAAAATATAAAAAGCGTTGATGTATACTC
AAAAAGTTGTATAATTAAACGGATTGTTTTCAATCACGAACAAAATAACGTTAATGTTGA
TTGTCAACTGATTGAAAATCTTGAACCGTTTAACTACGAACTTCATGAAGACAGTATGTA
CGAAATGAACACAAATGAAACTAAAAAGGTTTCAGTCAATTTGGAAATTGAAAAGAGGTC
GAACACAGAAGATAACACGGAAGAGTCTGGTGTTCTAATTTTAAAAACAAACGCCATTGA
AGGATTTGGACATGTCATTGTTCAGCCGCCAAATTATAAATTAGTGAAACGAAAAATTAA
CCACGATAATTGGAAAGGGAATAAGAGAAGATTGTTAAATCCCTCTATTTGTAATGGAAA
TTTTACGAGTACTAAACTGACACAGAAAACGATCCATGATTTTCTACCAAAGATAGTTAA
TGTTTTTAGTTTGAAAGGGAAGAATACAAATGCTAGTGAAAAAGATGTGATAAGTGCGAA
GGCAATGAGTAAGAATTCCGGTATTGGTGATAGTATAAGGAGGACGCCGTGCAAATTAAA
CGATAAAAACAATGAATCTCCCAGATCGGTTAAAACAACGTCTATGAGACGTGAAATTAT
ATCTCCGAGGAGTCAAGATCTCAAGCCCATAAGGACTGAAACTCCTCACACACAATCTGC
GAAGGTTAGAAATGAGAGTGCAAGTGCGCATTGGCCGAGAAAAGGAGTTGAGACTTTAAA
TTTTAGTTTACCAGCGAAGTCGAAATCTAATCGCACATCAATTTCTCCAAGAAGCATACC
GCATCATAAAATTGTTGCAGGTACACATTTCGCGGTTGATGCATTTTCATACGGAGATAT
ACCAAACGTGAAGAATTATTTTTTGACACATTTTCATTCGGATCACTACACGGGGTTGAA
GAAAAGCTTTAATAAACAACTGTATTGTTCGAGAATAACAGCGGACCTATGCATATCTCG
TCTAGGTGTGAATCCTAAATGCATCCACGTAATAAGTATCGATGAAACAATTCGGATTGA
CGGAGTCGAAATAACTGCAGTCGATGCAAATCACTGCCCAGGGGCTCTGATGTTAGTATT
TACGTTACCGAATGGAAAGACTTTGCTTCACACTGGAGATTTCAGAGCATCGCACACGAT
GGAGTCATATCCCATATTTTGGAACAAAGATATTCATACTGTATATTTGGATACCACTTA
CTGCAATCCCCGATACGACTTCCCAACGCAAGATCAAAGCTTAGAAATGGCTTTACAGAT
TTTGAGACAAAAGAAACTCAGCCTAGAAAATGCAGGGAAAAAGTTCTCATCTGTGCTCAT
TGTGTGCGGTACTTATACAATAGGTAAAGAAAAGTTCTTCCTCGGTATTGCCCGTCGAGT
CGGTTGTTCGGTTTGGGCGTGTCCGGAAAAGGACAAGATTTTACAAGTTGTTGAAGGACA
AAGTTTCTCTCACACGCCGCCTCACTCCTGTCAATTACACGTGGTACCTATGAGGGATCT
TACTCATGAGAAATTACGAAGTTACCTGGACAGTCTTAAAGGAACATTTAGCGAAGTAGT
AGCTTTTAAACCGAGTGGTTGGGAGAACGGAAAGAATTCCTGTGTCGAGAAGGATTTGGT
CACTTTGCATGGTATACCATACAGTGAACATTCAAGTTTTTCTGAACTTATAAGATTTGT
TAAATATTTAAAACCGAAACAAGTCGTGCCGACTGTCGATATATCGGGCGGAATAAAAGC
TGTTCAAAAATACTTCCCGTGCCCTTTGGTTTGCAAAGACGATGTAGCGATTCAAAGCAA
AGTGACCGACTACTATAGTTCGCAGAATCGACAGGAAGTTCCGGCCGTAACTTGAAATTG
CATGATCTCAAAGTATAATATTATTAAAACAAGTATTAAGCTGATACCACTGTGA
(2815 bp)

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