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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp25919_c0_seq3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC106130010_[Amyelois_transitella]
Ontology
GO:0000715 P nucleotide-excision repair, DNA damage recognition
GO:0000784 C chromosome, telomeric region
GO:0003684 F damaged DNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006281 P DNA repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006974 P cellular response to DNA damage stimulus
GO:0031848 P protection from non-homologous end joining at telomere
GO:0035312 F 5'-3' exodeoxyribonuclease activity
GO:0036297 P interstrand cross-link repair
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:1.37 TPM:1.15
ORF EntryO_TrvaMG10740_complete:A_TrvaMG_comp25919_c0_seq3
Sequence
(Nucleotide)
CCTTATTTGGTATCCATTTTCCTCAATGCACTTATTTATTTAATTTAGTTCTATGATGTT
TAATATAATATTAGAAATATGACTCGAGGAGAGTTTAATAATTATTTTTACTTTACTGAA
GAAGTTATTATATTTTCAGAATTCAATTACAAGCCGGTTTTCACTGTCTCTTGGATTAAA
AAAATCCATCACTTCGTTTAAGGATAAGAAGAAATCGCAAATAAGTGTCGGTAATAAAGA
AAATTCGAGTAATGTCTGTAACGTGGATCGTCAAGCAACTGTTTTGAATGATGCTGAAAC
AGTTATTTTAAATACTCAAGATACAACTGATTTAAGCTTCTCTTTTATTGAGAACTCGCA
AAGAAGTTGCATTAAAAAAATAGTTTCGAATGTTGAAAGTACAGCTGAAGCTGATGATCT
TCATGATCTAAGTCATGATACGATTTTGGCAGATACCGAAGACTGTATTGGCGAAAAAGA
AAATGACGACACACTTTTAAACACTGCCAGACCACTTATAGAAGTTTCGTTTTCCATAGA
AAATATAAAAAGCGTTGATGTATACTCAAAAAGTTGTATAATTAAACGGATTGTTTTCAA
TCACGAACAAAATAACGTTAATGTTGATTGTCAACTGATTGAAAATCTTGAACCGTTTAA
CTACGAACTTCATGAAGACAGTATGTACGAAATGAACACAAATGAAACTAAAAAGGTTTC
AGTCAATTTGGAAATTGAAAAGAGGTCGAACACAGAAGATAACACGGAAGAGTCTGGTGT
TCTAATTTTAAAAACAAACGCCATTGAAGGATTTGGACATGTCATTGTTCAGCCGCCAAA
TTATAAATTAGTGAAACGAAAAATTAACCACGATAATTGGAAAGGGAATAAGAGAAGATT
GTTAAATCCCTCTATTTGTAATGGAAATTTTACGAGTACTAAACTGACACAGAAAACGAT
CCATGATTTTCTACCAAAGATAGTTAATGTTTTTAGTTTGAAAGGGAAGAATACAAATGC
TAGTGAAAAAGATGTGATAAGTGCGAAGGCAATGAGTAAGAATTCCGGTATTGGTGATAG
TATAAGGAGGACGCCGTGCAAATTAAACGATAAAAACAATGAATCTCCCAGATCGGTTAA
AACAACGTCTATGAGACGTGAAATTATATCTCCGAGGAGTCAAGATCTCAAGCCCATAAG
GACTGAAACTCCTCACACACAATCTGCGAAGGTTAGAAATGAGAGTGCAAGTGCGCATTG
GCCGAGAAAAGGAGTTGAGACTTTAAATTTTAGTTTACCAGCGAAGTCGAAATCTAATCG
CACATCAATTTCTCCAAGAAGCATACCGCATCATAAAATTGTTGCAGGTACACATTTCGC
GGTTGATGCATTTTCATACGGAGATATACCAAACGTGAAGAATTATTTTTTGACACATTT
TCATTCGGATCACTACACGGGGTTGAAGAAAAGCTTTAATAAACAACTGTATTGTTCGAG
AATAACAGCGGACCTATGCATATCTCGTCTAGGTGTGAATCCTAAATGCATCCACGTAAT
AAGTATCGATGAAACAATTCGGATTGACGGAGTCGAAATAACTGCAGTCGATGCAAATCA
CTGCCCAGGGGCTCTGATGTTAGTATTTACGTTACCGAATGGAAAGACTTTGCTTCACAC
TGGAGATTTCAGAGCATCGCACACGATGGAGTCATATCCCATATTTTGGAACAAAGATAT
TCATACTGTATATTTGGATACCACTTACTGCAATCCCCGATACGACTTCCCAACGCAAGA
TCAAAGCTTAGAAATGGCTTTACAGATTTTGAGACAAAAGAAACTCAGCCTAGAAAATGC
AGGGAAAAAGTTCTCATCTGTGCTCATTGTGTGCGGTACTTATACAATAGGTAAAGAAAA
GTTCTTCCTCGGTATTGCCCGTCGAGTCGGTTGTTCGGTTTGGGCGTGTCCGGAAAAGGA
CAAGATTTTACAAGTTGTTGAAGGACAAAGTTTCTCTCACACGCCGCCTCACTCCTGTCA
ATTACACGTGGTACCTATGAGGGATCTTACTCATGAGAAATTACGAAGTTACCTGGACAG
TCTTAAAGGAACATTTAGCGAAGTAGTAGCTTTTAAACCGAGTGGTTGGGAGAACGGAAA
GAATTCCTGTGTCGAGAAGGATTTGGTCACTTTGCATGGTATACCATACAGTGAACATTC
AAGTTTTTCTGAACTTATAAGATTTGTTAAATATTTAAAACCGAAACAAGTCGTGCCGAC
TGTCGATATATCGGGCGGAATAAAAGCTGTTCAAAAATACTTCCCGTGCCCTTTGGTTTG
CAAAGACGATGTAGCGATTCAAAGCAAAGTGACCGACTACTATAGTTCGCAGAATCGACA
GGAAGTTCCGGCCGTAACTTGAAATTGCATGATCTCAAAGTATAATATTATTAAAACAAG
TATTAAGCTGATACCACTGTGA
(2482 bp)

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