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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp25897_c0_seq3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_ribosome_biogenesis_protein_BOP1_homolog_[Plutella_xylostella]
Ontology
GO:0000463 P maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000466 P maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0030687 C preribosome, large subunit precursor
GO:0042254 P ribosome biogenesis
GO:0042273 P ribosomal large subunit biogenesis
GO:0043021 F ribonucleoprotein complex binding
Transcript
Level		FPKM:1.18 TPM:0.99
ORF EntryO_TrvaMG10616_3prime_partial:A_TrvaMG_comp25897_c0_seq3
Sequence
(Nucleotide)
CACATTTCGTGTTGCACGCACGTGTTTTACAGTTTTTAAAACATGAACGAGTGATTTTGA
TCAAAAATGCCTCCTTTAAAAACAGGATTAAGTTTAAAAAGAAAAATAGGAACTGAAAGT
AAGAAGAAAGATGCAGAGATTAACCAAAAATCGTCTCTTGTCGAGGCCTCTGATGAGCTA
AATTTAAGCGAATTAAACCTGGAAGGAGACTCTTCGGACTCTGAAGCCGAAGAAAAGGAC
GAGGAAGCTTCGGATAATGAACAAGATGAAGTTTTGTATCCAGAGAGTGATGAGTCGGCC
GTTGAAGATGAAGATGTAGAATATGCTTCAGATGAATCATCAGAATTAACGGATTCAGAA
GCAGATGACGAATCCAACGAAGATGACTCCAGTCCAGTTGAAAGTGATGCAGAGTCTGGC
ATTGGACATACCGCTGGCTCTAGTGGTAACGAGTCCGACAAACAAACCACCACCAAACAG
AAGAAGAAAATAACTAAAACTATCAAACAGAAAGAAGAAAAAGAGACAAATAAAGAAGTT
AAACCAAAAAAGAAAGGAAAAGTAAAAGATAATGTTGATAGGTTAGCTGATAGTATTGAA
GAGAGTGTCAAAACACAACCTGTTGAACAGAAAGATGAATATGAGTCTGGTGACACGTCT
GATGAAGAGGAGCGTCGTAACACGGTGGGAGACATACCGATGTGGTGGTACAACGAGTAT
CCACACGTCGGGTATGATCTCGACGGACGCAAGATCATCAAACCACCACAGAGAGATCAG
ATTGATGAGTTCCTTAAAAAATGTGAAGACCCAGACTTCTGGAGGACGGTCCGTGATCCG
CAGACAGGACAGGATGTGGTGCTCAGCAAGGAGGACCTGCAGCTCATACAGCGGATACGG
GAGGGACACGTGCCCAACGCGGAGCATGATGAGTACCAGCCCTGGGTAGAGTGGTTCACT
CGCGAGGTGCTAGCGACCCCCCTGCGCGGGTTCCCGGACCACAAGCGCTCCTTCCTGCCC
TGCGGAGGACAGGATGTGGTGCTCAGCAAGGAGGACCTGCAGCTCATACAGCGGATACGG
GAGGGACACGTGCCCAACGCGGAGCATGATGAGTACCAGCCCTGGGTAGAGTGGTTCACT
CGCGAGGTGCTAGCGACCCCCCTGCGCGGGTTCCCGGACCACAAGCGCTCCTTCCTGCCC
T
(1201 bp)

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