SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp25895_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		cell_differentiation_protein_RCD1_homolog_[Bombyx_mori]
Ontology
GO:0000932 C P-body
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006402 P mRNA catabolic process
GO:0006417 P regulation of translation
GO:0017148 P negative regulation of translation
GO:0030014 C CCR4-NOT complex
GO:0030015 C CCR4-NOT core complex
GO:0031047 P gene silencing by RNA
GO:0033147 P negative regulation of intracellular estrogen receptor signaling pathway
GO:2000327 P obsolete positive regulation of nuclear receptor transcription coactivator activity
Transcript
Level		FPKM:6.94 TPM:5.84
ORF EntryO_TrvaMG10603_complete:A_TrvaMG_comp25895_c0_seq1
Sequence
(Nucleotide)
GTTCAGTCCAAACTACAGCATAGCTTTATGCAACTGGATTATGCTTAAAACAAAAACATA
TTGTAGATAAATTACATTTATAAGTTCATTAATTTAATGACAATCCTAGGATGTAATTAG
ATATGTTGTATATAAGCAGCTGTAACAATGTTAAACATAATTTTAAATAAGGTCTTTATA
TCCTAATCACAATATCGCAGAATATTTTAGAGTTAAACACATTTGACATTTTTCTTTTGT
TAATTTATTGAAAAGTAATTTTGTGACAGGAAATCAGGCACCAGTGTCTGTTACGGCCAA
TTTATGCCTTTGACGTAACGTCTAGTGCATACACTAGAGCAGTTTGTGTGTTGATGTCCA
TCCCGTGCTCCTAGCAAACAGAAATATCTTGTCAAATGTGTGCAACTTATTAACAAACAT
ACTTATAAATAAGTTCATATTCAATCAGCCACAGCACATGGGTCCACTCGAAATAATAGC
AAGCAGTTTCACAAATGGGTCACAATGTAAAATTACACTTGTTAGGTTTTAAAACAGTGT
TTTAAATGAGCAAGCAAATACATTATTTTAATTTCATCTAATAAGCCAATACAATAATTA
ATATTTTTCTAATACTGCCACTAACTTATAAGAATCTTTCATAGGAACTAAATAATGCCT
TAAAACATGCAAAATAATTTTTGAGCAAAAACTGTGCACCAATTTTCATAAGCAGTGCTT
TTATACAAACCATGAAAATTCACTGCTGAACATAGATCTTTCTACATGTAGAATAATGAC
AGCAGCTTGCATCCAGTAGGTTACAACCACTTTGATTATGCTACTACTCCTCATTATTGG
GTATACAAATCCTGATACGTAGCCTAAACATAGTCAAGACTTGTATTATTTAGTAAGTTT
CATCCCTGTGACAGTGTTAGCACTGTTCTTCATAATTGTATCACAATTCATACAAGAGTA
ATTTTAAATTGGACACATTTTGTTTTGTCAAACTACTTAAATATTAGGTTCAGTGGACTC
ATGGCGTCAAAGTAGGCTCACATGTTCTGTTGGGCCGGACTGGCTGGAGGAGGCTGGGCT
TCCAGGTTCTTGATGAGCTGAGCCAACCAATGCTTGGTGGAGTTGTCCTCTTGAAGGCAT
GCTGTGAAGGTGGCGTCGCGGAGTTGGTCGGGCAAGCACTGTCTTAAAGCTTCTCTTGCT
CTTGGGTTATCAGATAGACGAAGGTAGCATCTCACAACATGCTTCAACAACCTTGCTGAT
GGATCTTTGGCTAGAGATAATACCATTTTGCCCAAAATCATAGCAACATGAGAAAATCTG
TCATAAGTCTGGCAAATATAGCAAAGTCCACTGTCATCTAGGAGAATCTTCTGTAGTATG
AATGTGGCAACGGTTTTGGAGAGTTCAGATCCATTTTCCATGATACGGAGGCATAGAGGT
ATAATTTCAGTGGTCAACAGGAATGTTATAACTTCTTGTTCATCAGTTTTCACTAAAGCA
CCTATTACTCCAAGACTGGTGAGTCTCAGGTATTCAAAAGGTCGTGTTTTTGATACAGTA
TGGAGGAATGGGTAGAGAAACAATGGAACGTGGGCCTGGAGAAACGCAGATCTTGTCTCT
GGATGAGATGCAACACACTGCATTAAAGCTAGTGCGTTACAGACACGGTTGCTCTGGTGA
GCGGTCAAAGTAGGAGGTATCATCGCCACATAGATATTGGTTATTTCTTGTAGAAGAGCA
GCGATCGTACCGAAGCTATGCCACAGCATCGGCGCCAGGTCCGGGACCACCTCTCGTTTC
TTACTCAACTCCAACAGTGCATTCTCCCGAGTATCTGGATTGCATAGTTCTAATATCCAA
GTGTATATCTTCTCTCTGTCAACGGCGGCTTGCATGTTCGCCGGACTCTGTTGGGCGCTC
ATGTTAATCATGTTTTGTACTATTGGCGTTAAGCGACTCATGAGGCTTGATTTATTTTCG
TGCTTGTAGGTACTCAACAGTTTCAAATCTACACGAAGTGTTCAATTTTAATTCGTCCAA
TATTAGGTTTTCTTGAATTGTAGCATTGGCAAGTTTTGTATAAATACGGTGTTTGGCAAA
TATTATGACAGTCAGGATCCAGAAAGTTGAAAGAACTACAGCATCAGCGGCAATTGGTGA
CAAAAACTGACGAATTGAAATTGCAAGAATTTCTAAATTCCACAATGGACGTTGTTGACA
CTTGACAGAACTGCTGTG
(2238 bp)

- SilkBase 1999-2023 -