SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp25893_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_sorting_nexin-17_isoform_X1_[Amyelois_transitella]
Ontology
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0007165 P signal transduction
GO:0008289 F lipid binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016023 C cytoplasmic vesicle
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0035091 F phosphatidylinositol binding
GO:1990126 P endocytic recycling
Transcript
Level		FPKM:1.64 TPM:1.38
ORF EntryO_TrvaMG10599_complete:A_TrvaMG_comp25893_c0_seq1
Sequence
(Nucleotide)
ATTTAAGTAAAATTAAATTCATAAGATTTGTAAGTTTTTATACTCATATAAATAATCTAA
ATAATGTAAGTAGTTGATTCCACAATATATAGGATGATTCATGCCCACTTCTTAGTATTC
TCTTAGTTAATTAGATCCCAGTTTGATTTAGAACTATTTTAAAAATGTTATAAAAATGCA
TGGTAAAAATTTACAAAATCATATTTTGTACTGTAAAATCTTGTGCATCAAATATGTTTT
GGGGCATTTCAGCGATTAACAGCATTTTTCACATCTGTTAACAGTTTATAATGTACCTAC
CCAAATATTGTAGCATAACTAAAAGTGTAAATCATCTAATTGGATTGATAACTTATCAAT
AATTATAATAAAATGTTAATCTATCCCTTGGTAACATATTTTAAACGGACAATATCCTAA
AAATAAATAAAATTCGAGATTAAATTCGATATTCAAAAATAATTACAATTCTTCGTCTCC
GATAGCCTCAAATGCGTTGTTTTCGACACAGTCCTTGCCCGGCTTGAAGGCGACCGTTGC
AAATTTCTCGGTGAGTCTTTGTACAGAAAATATTTCCTTCGAACTTGTCGAATTGCAAGA
TGAATCGGCATTATTGGAACTGAGTGTGTCGCTGGACGAGGACGGTGAGATGAGTTGGCT
GGAACCATCCCTCCGTAGGTAAGTGAGGTGGGAACGTTTCTCACATCGCGGTGACGAAGG
ACCAGCACCGCTTTTCTGTCGCATCAGCTCATCAACTATCGACTGTAAACAGACACTAAT
AAACGTGGCATGTTCGGTTCGCAAAGTTATCCATTGTAAATTATCTTTGCTAATTAAATA
TTCAAAAGATAATTCAAAGTTTTTATTCGATTCCTCATTCAATGAATTGTGTCCGTTGGT
TTGTGGTCGTTCCATGCAATGCAATGTTGTGATTCTCCAACACCTCATACGAGTGACTTT
AAACCGTTGTTCCCTTGGTGGTTGCGTTGTCGTTGTTAGAGTAAGTTCCTTGGCCGCAAG
AGAGACGCAAACACGACAACTACTGTCGGAGCTACTCCCTGAAATGTTGATGGCATCTGT
AACCGCCTCCCCGGCAGGAATACGACCGTAGTGCTTTAAAGGTCGCGCTAATTCCATATA
CTCTCTTTTCTGTTTTTTAGTTTCATATGTCCTTAAAATATCTTTTGTTTGTAAATCAGC
TATAATCCAGCCCAGATCTATTTCTTCCTTAGTTTGTAAATACAACAGATCCAAAGAAAC
ATCATCAATCATGAGATCAACATCATAATTGGAATCCCAGTAACTTTTTCTTAAAACAAT
TTTGTCCTCAGGCCTCACATATTTCTGTGATATGTAAGGACATTCATATTCCTCTAATTT
TTTTAAACAAGGTTGTCCATCTTTGGCACAACTCCAATTAAATAAATATAATGAAAAATA
TTTAATTAATTCCCTTGGCAAATTTAAATAATAACATGCTATATCTAATAAGGTATTTGA
TGAATCCGTTGAGGAAACAGACAACGGTATTCTGTAGCCATTCATTAAAAATATTTCTAT
TTCAACTTCGTGCATTGTTACTGAATGTGTTTCTTGTTGTGCTGAGAACAGGAATGTGAT
AAGTAAATCAGAATTGGCCAATAGAGGTATCTGTCCCACCATTTGTATATATTTTTCTAA
TAGGACCCTCCTTTCTTCAAGTTGTGAGCTAGTGAGAAACAGTTTCTTTGGAGGGAACTG
TGGAAATCTAACATACGGGTGTTGTGCTTGCAGCTGCTCATGCAGGCTGAGCAGCTGTCT
GTAGCGGGCGGTGCAGTGGAAAAATCCATCAATATAAATATTGTATCCCGTATATGAAGT
TCCATTGTCGTCGTAAAATTGTTGCGAATCAGGTATTGAGAAATGCATTTTCAAATGCTA
CTGTAAATTCTCATTTCCTTTATGTTGAAAGATATCTCCAAAAGTCGCTTAACCTGTTTA
CTCTCACCATTGACGTAAAATTGAACACCACATTATAGCAAAATACTTTACACTACCGAT
ATCAAAACAGATGTTATGT
(2059 bp)

- SilkBase 1999-2023 -