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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp25887_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_protein_shuttle_craft_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007399 P nervous system development
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
Transcript
Level		FPKM:0.53 TPM:0.45
ORF EntryO_TrvaMG10572_3prime_partial:A_TrvaMG_comp25887_c0_seq1
Sequence
(Nucleotide)
CGCAAATTGTGCAAATTAATTTTTGTTTTTATTTGTTTAATATTTTTTGTGCAATTAAAT
CTTTACCAGAGTATAAAACCATCTTTAACAGTCAGGGGTTTAAAAGTAGGGTAGTTTTTT
GCCTCGGGCTTCGGCCTGCAGGCTCCGTCCTGTTTCCAAACTAACATACAATAGTCTGGA
AAGCTTCAATCCATTAACAGTCATCTCCACTTTCACCATAATTTCACAACCTGATTCCAT
CAACTTCTGAAAACATGTCGCAGTGGAACAACTCTTATGCCTACAACGGTCAATACCAAG
CATCTAACGGCTGGAACGGCGATGCTAATGCTCAGTACGGAAACCCACAATACTTCGCGA
ACGGGCAGGATACCGCCAACCAGTATGTGAGCTTCAATGAATTCTTAACACAAATACAGG
GTAGGACTCCAGCTCAGGGTAATTCATCTCAATACAATAATGTTAGGTATGAAAACTATC
CAAACACCCAATACAATTATCAAAATATGCCATCTACATCACATAGAACTGTAGATAGCT
ATAATTATCAAAATAATAGTAACCCAAGGAATCCAGAGATGTACCAAATGAATGTGCAAA
ATCAATACCATGGGCCCCCTGAAACTTTTCAAAATGATATTATACTGAAATCTAACCTTA
CTCCTACTGCAATGGAGTTTGTTCCTAAAAGTATGGTTCAAGCAAGCTCTAGCTGTCAAA
ACTTAGCAGAACCTGTGAATAATCATAGCTCTAATGAAACAAACTGGAGAGAAAGACAGC
AGAGTTCTCATCAAAATGGTGATGTGACAAACCATCAGGTTACTGAGTCTAGAAGCCAAA
CAAACAAGCCCCAAACTAAGGCACATAACAACCATGAATCTGTTAAAAATGGTTATGAAG
GTACTAGACATCGTAATAATGATCAAAGAAACAATGAAAGAAGTAATGAATCAAGTAACA
GTAGTTATTATCAAAATCACAACGAAACCAAGGAATCTAAGTCTCGTCACGAAATGAACA
ACCGTGAAACAGCAAACAACGGTTATGACAGTGCTAGACACCGTAACAATGACCATCGGA
ATAATGAAAGAAATAATGAACCCAGTACCACTAATAACCATCAAAACCAATATGAAAATA
AGTCTCGGTATGAAATGAACAACCGTAATGAATCAAGCAGCCGTTATGAATCTAGGAACT
ACAACCGCAATGAAAAAAAAGGTCCTCCACAATCTAACCCTAAATCAAAAAGAGATCCTG
ATGCTCGTACTTTCTACAACAGTTCTGTTGCTAAAGATAGTCAAGATGTCAGGAATGGAA
GAGGTGAAAGTTCCGGAAGACAGAGGAATTGGGCTGGTAGTCAACGAGTCAAACCCTCAG
AGAGGATTACTGCTGAGGATGAATATTATGCTAACACATACACTCAGCAGAGACAAGAAA
GAATGGAACGAAAGGCTGAAACTTCAAGCCCAAGTAGATTTAGAAACAAGAATGTTGAAC
AACCAGCAGTCCTGAATAAAGAAATGACACAAAGAGAGCGTCTGACTGAACAACTTGAAA
AAGGAACATTAGAATGTCTGGTTTGTTGCGAGAGAGTGAAACAAACAGAGTCTGTCTGGT
CGTGCGGGAACTGCTATCATGTACTCCATCTTAGGTGCATCAGGAAATGGGCTATGAGCA
GTTTGGTCGATGGTAAATGGCGCTGCCCAGCTTGTCAGAACTCGAACGAAACAATACCGA
CAGAGTGTCGTTGTATGTGCGGTGCGATGCGCTCCCCGGAGTACCACCGCGGGCAGTATG
TGGCTCACACGTGCGGCAAGCTGTGTCGCCGGCAGCGGGCCTGTCCGCATCCGTGCACTC
TTCTGTGTCATCCGGGACCGTGCCCGCCATGCCAGGCTACCGTTACTAAGCAATGCGGGT
GCGGTGCTGAAACTCGTTCAGTGATGTGTAGCAGTAAACTACCACAAGTCTGCGGGAAGA
TCTGTCAGCGCATGTTACAATGCGGAGTTCACACATGCATGAAGGAGTGTCATGAGGGAC
CCTGTGATGAATGTGATAAAACTGTCACACAAGTATGCTACTGTCCCCTCGCGAAGACTC
GTTCCGTGGCGTGCTGCTTAGAGAAGTCTTGGTCGTGCGACGGCACGTGCGGGCGCGTGT
TGTCTTGCGGCGCACACGTGTGTCGACGCACGTGCCACGCGCCGCCCTGCCCCGACTGCG
ATCTACTGCCGCAAGCTATCATCACCTGCCCTTGTGGGAAGACTAGGATACCTAAAGACA
AGCGCAAGTCGTGTGCCGATCCGATCCCGCTGTGCGGTAACATCTGCGCCAAACCATTAT
CGTGTGGCCCCGCAGGAGACAGACACTTCTGTAAACTGGACTGCCATGAAGGTCCATGCC
CCGTGTGCCCCGAAAAAACGTTGTTACCATGTCGATGTGGTCATTCCAACCGCGAGATTC
CATGCGCCGAACTACCAGATATGTACAACAATGTGTTCTGTCAGAAGAAATGTAATAAGA
AACTGTCGTGCGGTCGTCACCGTTGTCGCGCGTGTTGTTGTGCGGACACCCAGCACCGCT
GCGGACTCGTGTGCGGACGCTCGCTGGCGTGCCAGACGCATCGCTGCCAGGACTTCTGTC
ACACCGGACACTGCGCACCCTGTCCTACTCTTAGTTTCGAAGAGCTATCGTGTTCGTGCG
GTCGCGAGGTGGTGTTGCCGCCGGTCCGCTGCGGCACGCGTCCCCCGGCCTGCACCGCGC
CGTGTCGCCGCCCGCGCGCCTGCGGACACGACACACTGCACTCCTGCCACACCGGGGACT
GCCCGCCCTGCGTCGTGCTCACCACCAGGACCTGCCACGGGGGACACGAGGAACGCAAAA
CCATCCCGTGTTCGCAAGAAGAGTTCTCATGCGGCCTCCCGTGCGGCAAACCCCTGCCTT
GCGGTAAACACACCTGCATCAAGGTGTGCCATAAGGGACCTTGCGACACCGGCAAATGCA
CTCAGCCGTGCACCGAGAAGCGTTCAAGCTGCGGTCACCCGTGCGGCGCGGCGTGCCACT
CGGGCGCGGCGGAGGGCAGCCCGGGCGCCGCGTGTCCCAGCTCCGCGCCCTGCCGCCGCA
CCGTGCGCGCCACCTGCCCCTGCAAGAGACGGTCAGCTGACAGACCCTGCTGTGAGAACG
CGAGGGACTATGACAGGATATTAGGTGCGCTTGCAGCAACTAAAATTCAAGAAGGAAGCT
CTGTCGATCTCTCTGATGCACAACGTGTCATTAATATGCTCAAAACTTTGGAGTGCGACG
ACGAGTGTTGCGGATCTGCAGCGCCAGCGCCATCTGCCGTGTGCG
(3345 bp)

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