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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp25847_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_bystin_isoform_X1_[Bombyx_mori]
Ontology
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0001701 P in utero embryonic development
GO:0001825 P blastocyst formation
GO:0001829 P trophectodermal cell differentiation
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005881 C cytoplasmic microtubule
GO:0006364 P rRNA processing
GO:0007155 P cell adhesion
GO:0007420 P brain development
GO:0007565 P female pregnancy
GO:0008283 P cell population proliferation
GO:0016020 C membrane
GO:0030182 P neuron differentiation
GO:0042254 P ribosome biogenesis
GO:0042995 C cell projection
GO:0043231 C intracellular membrane-bounded organelle
GO:0044822 F RNA binding
GO:0045177 C apical part of cell
GO:0048471 C perinuclear region of cytoplasm
GO:0071222 P cellular response to lipopolysaccharide
GO:0071347 P cellular response to interleukin-1
GO:0071363 P cellular response to growth factor stimulus
GO:0071407 P cellular response to organic cyclic compound
Transcript
Level		FPKM:8.16 TPM:6.87
ORF EntryO_TrvaMG10428_complete:A_TrvaMG_comp25847_c0_seq1
Sequence
(Nucleotide)
TTTTTTTGTAATATACATTTATTTTTAAAGTTTTATTAAAATGCTTATATTACTTATATA
CAAATAGTATTATTCAACTGACATCATGTTTGACACTTCTTCGTTTGCTTCAACATCCCT
GCACTGAGCTGACTGTAACTCCTTTCGAATCTCTTGTGTTATTGTTGGATGGGATTGCTT
TCGTAACAACTCAAGAAGAGCATCCCGTTGCTCAGTTGATATATCTGCTTTGTAACGCTG
AACAAATGTAAGCAAAGCTTGGTGCCACAGCACTGGTAATGCACGGAACTCAGATTGGAA
CCTCAAAAAATGAAATACAACAGCATCAACAACTCTGTATGGCAAAGCATATTTTTTATC
AAAAAGTATTCTGAGGAATATGGAATTAGCACCATTGTAGTCCATTTCAGCTATTTTGAG
CAAAGCTGCACTAGAATGTAAAACTGGCACAGAATTACGAGCTAAAACTGATCCTACAAT
TATGGCCTCTCTTAATGTGCAATCTCCAGCCTCACATAGTGGTAGTAATATTCCTTTCAT
AAAAGCACCAGGCTTAAACAATGCCTTACGTAAAGCTTGATACAAGTGAAAATTCAATCT
CTTGTATTCTGCAAGATCATCTCTGACACGTGGAAGTAAAACTAAATTGTAAAACCTTTG
AGCCATCTTTTCTTTTAAATTGGAAGCAAATATCCTGGTGGCCTGGTACATAGCAGCTGC
TGACCAAGTAGTAGGCTCTGTCAAGTACAATATTTGTTCCCAGTTTTGTAAATGTGGTAC
CATCTTAAAGGCTTTTGGCAATTTTCCAGATCTGTATTTTTTAAGTACATCTCTTACACC
CTCATACATGGTTTTTATTCTTGGATCAATATTTTGTAATTTTAATGTTTCTGCATCTGA
GAATTGTGTTTGTAATTCTGTATGTTTATCTGTGATTTTTTCCTTAATGATATCAGCTAA
AGTTCTAGTTCTTTCGGATTTAGCTGACATGAACATTTTAAGTGCCTCTTCATCTGCTTC
ATTGATCTCAATGTTGTCATAGTATGTATCAGGTTCCAAATCATCCTTCTCTGAATCTGA
ACCATCTGAACCTGCATCTTTAAAATTAACACCAAGCGTCATATGTTTTGCCGGGGATGG
ACCAACCTCATTGTCACCAAGTTCAGCCTGTTGTCTTCTGGCAGTTTTCAAAATTTTTTT
AGACAATTCGGCATTGACGAACTCGTCATCATCATCGTGCCTGTTTCTTTCTTTTGACCT
ATTCTTAAGTTTTACTGAATTTACTGATTCAATCTGATCAGCAAGAGCAAGGTTCTTTCC
AACCTGTGAAGGTTTTAACTTTTTCACTTTCCCCATATTTTCGTTGAAAATAATATTCCT
TTTAATCAGCCAGATGATACGTGTCTGTTTCTTTTGTTGTTACTTATTGAAGATTATTAA
AGGTAATCACAAAATAAAATAAACACAGGACTCGAATTAAAACCATGTGCTGATGACAGG
(1500 bp)

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