SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp25819_c1_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC101736992_isoform_X1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005643 C nuclear pore
GO:0006406 P mRNA export from nucleus
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0016973 P poly(A)+ mRNA export from nucleus
GO:0030154 P cell differentiation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048477 P oogenesis
Transcript
Level		FPKM:2.68 TPM:2.26
ORF EntryO_TrvaMG10366_complete:A_TrvaMG_comp25819_c1_seq1
Sequence
(Nucleotide)
GGAGGGTAAACACTAAATAGTGACCTTGTATCGTTTCACGTGTTGTTTTGAATGTGATCT
ATTATTTTACAAAAATGAATCCTGGACCTGCATTCCCTCGTCCTACTCCAAAGAGTCCTG
GTATAGAAACATTCGGAAATCCAAAGTCGTCAATCACGTGTACCAATGTTCCGGAAGATC
TTTTCGAGCCTGCAACAGCAAAGAAACATTTTGGCAAATTTGGCAAAGTTAAAAAAATAA
GACTTGTTCCAAAGAAGCAAATGTGTGTTGTGGAGTATGATCAGCCTGTGTCGGCTGAAC
GAGCTGTGCTGAATGCTGGAGCATTTGATGGCTTCCTGTTTGATGTAACTCGTTCAAAGC
AGAGAACAAGACGTAAAAGTGCATTGACTGATGACCCTGACTGGGTGCCAGATCCTGAAG
TTGCAAAGGAATTGTCCGCACTTAGTGGAATGCCAGTTTACAGAGTTCCACGGCAAAAAC
CCATGGAAACTGAACCAACATCGACAGTTTTTGTCACAAAAAGTCCTTTCAAGATAGTCA
AAAGTCCTGTGAAGAGCAGCAAGGGTTCTGTAACGAAAGGGTCACTGGTCAAGAAAAGCA
TTATTCCACCTAAGTCAAAACAGCCAGCCGACACAATTACTCCGTCTCAAATGGCTAGTG
GAACGGAATCACCAATAATAGTGTCTTCAACGCAAACAAGTATGAGTACATTTGAAGCTG
CTTCGGAGCTACATCAGCTACGATCAAGAGTATCAACAACTCCTGATGAAAAATGGAGAA
CTTTAGATGCAAGAGATAGGATCCTCAGGGCATGGGGTGGTGCTGGTTCACGACTTAAGG
TGGGCGGGGCTACTATAGGTACCTGTCCTGATATGTGCCCGGAAAAGGAGTTGTTACACA
GGCAAGCTGAACACCAGGTTATGACTTTAGAAACCGTACCAGGTTCGGATGGAGAGTTGG
AACCGTGGCGCGCCGTGAAGCAATACAGTCGCAGCTCAGCCGACCAGGAAATACCGATGT
GCTATGAACTGAGACCAGCCTCGGTGCTCATGAAGACCTGCTCCTATCTACTGCATGAGA
TCGCTGACACGCCAAGACAGGTGTCATTAGCAGACTGGTTTCATTTCATGTGGGATCGTT
TTCGGAGCATCCGTAAAGATATCACTCAGCAGGCATTGTGTTGTGCAGATTCAATACGTC
TAGTCGAGATGTGCGCTCGTTTTCACGCACATTGTGCAGCTCGCCTCGCCGACCTAGAGT
ACACGCAGTTCGATCAGAAACTGAACACAGATAACCTTACCAAGTGTTTGCAAACATTAA
AACACATGTATGCAGATGTGGCGTCCGATAAAAAGCCAAACGAAGCCGAATTTAGAGGAT
ATATAGCGCTCCTGAACTTAGGAGACGCTAATTTCTGGTGGGAGATTAAGCAGTTGCCAG
ATGAAATTCAGAAGTCAGAACCTATAGTTTTCGCCATAAAAATCTTTAATACCATAGACA
ATAATAATTACGTTAGGTTTTTTAGATTGATCAAAGAAAATGCAACTTATCTACAAGCAT
GCATCTTGTTACGATATTTCAATGATGTGCGCGCCAGAGCATTGGCGAGGATTGTGAAAG
CTTACGCACCCAGAGGCGGTTCACGATTTCCAGTAAGCGATCTAATGAGTGCACTAGCTT
TCGAATCCTTGGAACAAATGGGATCTTTCATAAGTCACTATGGTTTAAGGTTCTCGAAGT
CAGACGATGTAGAATTTTCTGTTATATTAGATAGAAATCAGTTTATTGAAGACAGTGATC
CATATCCAATCGAAAGGGCTGTTGAACTAATTGAAAGTAAGAGACAAAGATCTGTATGTG
AGGTTATTGCAGGAGGACAGATATTGAGGCATGATTACAAAAGTCAAGTACTCAACACAA
GTTTTTATCCTGATGGTAAATTAAAAGATTCTGCTCTCATTGCTGGGGACCAAGGCTACA
ATACCGTCAATGATAGTAACAAAGACGTACAAGCACTCAAATTAGAGATTGAGAGGCTCT
CTCGCACCGGCAAAGTTTCTATGAACACTATTACAGAAAATACCTTGTCAGTGAATAGTG
AAACAAAGCCGAAGCCTCTGTTAACTAATAAGGGTTTATCTGATACTACTAAAGGTGCTC
AGTTATTTAGTTTCAAACCTGCGATACCGGTTGCGTCGACAGATATTATAAAACAATCAC
CGGAAAAGATCTTTGCTAAAAATGCACAAAATGTGTTTTCATTTTCTAAACCACAGAACA
CAATGGATTCAAATGGCCCAAGAAATGCCACTGAAAATTTGTTTAAAGTACAAGACAAGA
AAGTGTTTGATATTAAAAGTACAGTAAAAACGAATACTGACGATAGAGCATCTAAAACGA
ATATATTCCAAAAAGTAAATGAAAAGAGCAACCCACCTCAAAGTTCTAGAAATGTCTTCA
GTAGTGCAAATGCCGGATTACAAACGAAACCGAAGCCTGTTACTGCAAATATATTTAGTA
AAACGACAACTAGTAAAAATAGCGAAAACACAGCAGAATCTATTTTTAAGAACAAAAACA
CTGATCAAGATAATATATTTATGAAAAAACCTACAAAACCTACCCCATTCTCCAAATTTA
GTGAAAGTAAACCAGTGAATATCTTCGCTAAACCAGACAAAATTGACGAACCAGATACTA
ATATGAGTCAGAATATTTTCGGAAGTTTTGGTAAATCAGAAAAGAATATATTTTCCAAAC
CTCATGTTTTAGATACAAGTCCATTTCGAAAGGTTAATGGAGAAGACAAACCTTTGCAAA
AGCTATCGCCTGGTACATTATTTAAAAACGCAACAACTGCGTTGCCTCCCGCTGAAGGTG
AAAAGACCTACTCTATATTTAGTACAAAAAATAAAGCACAGGTTGTGGCAGATAACATAC
TGAACTCTGTTAACAATGCACAGAAAGGTGACATTTATGATTTCGATCAAAATGATGAAA
AAATTAAAACATTAGAAGAAATAGAAAGTATCAGACAAGAAAAGGTCAGGCAGGAAGAGG
AAAATCGTCAACTAGAAATAAAACGTCAAGCAGAAGAACAAGCGTTGCGGGAACGAGAAC
GACAAAGGAAAATAGAATTAAAGCTACTTGAAGAAAAACGAAAGCAAGCCGAAGAGAAAC
AACGAAAAGAAGAAGAAAAAAGACGGAAAGAAGAAGAGAAACGCAGAAAAGAAGAAGAAA
AGCGTCAAGCAGAGTTGAAGAAAAAACTAGAAGAAGAAAGGAAAGCTGAACTTAAACGTA
AAGCAGAAGAAGAAAGAAGAAAATTCCTTGAAGCAGTAGACAAAGAGTCCAGTGAACTTG
TAAGTACGTTAGTAAACGAAGTAGGAGATGAAACTGTAAATCAGATTATGAAGGAAGAAA
TGGAAAAATTCAAACAACTAGTCAAATACGCTAATACTGTCACAGACGAAATAATAACAG
AGCTGTGTAATGAAATGTGCAGATCTGAAATGAAAGCAGAAAAGTTCTGGACAGATAAAT
TACTACGTAAGTGGTTTATTGTTTGGAGAAGACATTATATCCGAAATTATAATAGACGAT
GCCTTTTGGAAGACACTCCAGTGTGGTTATCCGATAAGACTCCTACAGAGGAGGCATTCA
GGTTAAGAAGATCAATTGAGAACGCAACTTTAAAGAATATGAATGCTATACACAGAGGTT
ATAAATTTGTAGGCGAATTGAAACAAATACCACCTCCAGAGCCGTATAAAATAATCGAAA
TCATCAAATCTCCATTGTTGAAACGTATGAAACAAATAAGTTACCCTTACGACAAATGTT
TCTTTTGGAAAATAACAATGGTAGGCCCTGAAGAAGAGAGTTGGTTGTTTAGAAAGATTC
ATGTCGAGAAATGGATAAAAGACGCTTTTTCCGACGGAAAAAAACATGAATCAGAAAATT
TGATACATGTTAAGAAATATACATGGAATCAACTGGTAGACTTTGCCATATCTATTGGTT
TGCTCAGTTCTGGAACATGTCATAATATAGAAACAATCGAAGGTACCAATAGCCTATTAT
TTTACAGCACAGAATCTGATGTACATGTGTTGAATAGAATACAGGAGGTAGTAAAACAGA
CATATCCGCACCAAATTATTCCCGTTGCAATGATCATGGCCAAGACAGACGATTCGTCCA
AATATTGTGATGTTGAAAATCTCCTGGCAAATTATGTCAAAGACAAAATCATATCGACCT
ATAGGTTATTTTACGTTGATTCACAAAATGTATTAGATTCGTTAAATACGTGTACGAAAA
AAGCTTTAAAATGGCTCTCGAAACATTACCCACAAACACCTCCTTTACAAATAGATTTGT
TAAAATCAATATGCCAAAGATATCTTGGTAATGAAATATGGTGTAAGTTCAGAATGGAAA
AAGATGACAGGGCGAGATCTGTGATGAAAGATATAGTGAAACTAACAAATTTCTACAACA
CTGCCGTCGATAAATTGACGAAAGTTATTACAGATGAAGATAATTTGAACTATCCAGCAT
TTCCTTTAGAATTCAAAAAGTTTTTGGATGAAAATTCCCCATATCCTAAACCCTATGAAT
TTATATCAAGCAGTGTTCGGACTGACGAAAATAATATAGCCATAAAACGTTTAATGTCGA
ATTTAAAGCTACCGGAACCGGCATTTAGGTTCAAACCTATTGATACACCAAACATGCAGC
AGCAAATTCGAAGTTATTGTAAACAAATAGGTTGGCTTGGAAATACTGAAGAAGAGGTTG
TGTGCAAAGTGATAACAGTTCTACCTCATGAGCTCACAGATTTAAACATTACTTCTGAAA
ACTTTAACAAGTCCTTTATGCACTATAATTTAACAGATATTCTAAATGTAATTGTTTATG
AAAGAATAAATGATTTGAAGCATTTTGAAAATCGATTTGCTATCTATAAAACATCAGCAT
TACAAGAATATCATTCTTTGGATTGGTTATATGAAAGTAATTTTTTGACTGAAATTCGGC
CTGAAGCTGTAGAATATGAAGATAATGATGATGAAATAGAATATTATATCGAAGCTAAAC
GTCGTAAAATCGAAGTGGATTGTCTTGAGAGTTTCATGATACAAGACATAGAGAACACTA
TTGTTGAAAATAATATTGCAAAGGCTGATAGAAACATTTCAAAATATATTGATTGTACAG
AAGCTGTGAAACAATTGGAAACAAAATTGGAAGAAGAGAAACAAAAATCAATTGAATTTG
AGAATATGCTTCAAGCTGCTCTTGCTAATGTATGAGTAAATTTTGATCATTTAGATCTTG
GTATACCTGTATATTGTGGCATTAATTATTTTTTACGTAATTTTCAAAGGAAAGGATTTC
AATAAAAA
(5408 bp)

- SilkBase 1999-2023 -