SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp25810_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_probable_tRNA_pseudouridine_synthase_2_[Papilio_polytes]
Ontology
GO:0001522 P pseudouridine synthesis
GO:0003723 F RNA binding
GO:0006396 P RNA processing
GO:0008033 P tRNA processing
GO:0009451 P RNA modification
GO:0009982 F pseudouridine synthase activity
GO:0016853 F isomerase activity
Transcript
Level		FPKM:2.09 TPM:1.76
ORF EntryO_TrvaMG10352_complete:A_TrvaMG_comp25810_c0_seq1
Sequence
(Nucleotide)
GAATGAAATTTCGAACTGGAGCGTTGGCATATAAAACTTTAAACGGTTTGATTTGTGTTT
ACAAACCACCGTGTGTCTCTTTAAGACGAGTGCAAAATACTATCAAAACAAATCTATGCA
GAGATTTAAACGCATTGCCCGATGATCCACAAGAGAAAAGAGTAGAAATTGTAGGGGCTA
CAAACGAGCCAATGAAGATACGTTTGGTTCCCAACTATGCTGACAGCCCCTTAGCCTGCG
GTCCGAGGTTCATCAATGAAGACATTCGGTGCAGTTGGGCTACTCACTTAGGTTTATTTA
CGAGCGGAATATTGTTGTTAGGTATCAACGAAGGCACAAAACTAACCTACTTAATAAACA
CATCAAGACCTACCAGAGCATACAAAGTTCATGGCCAACTTGGCAAAGCTACGGACACAT
ACTTCTGGAATGGTAAAACAGTTGAGCGTTCATCGTATAAACACGTATGCAGGGAGAAAA
TAGACGGAGTCGTGGCAAACATGCAGGCGGCTCATCAGAAGGCTATGTATGAATTATCAG
GTGTACACATGGATTCTCAGACGATGTATGATCTCGCAGTACAGGGCCCAATCAGACCGG
CCAGCACCAAAATACCAGTTCTCTATGGAATTAAATGTGTACATTTTGATTCACCTAACT
TTACTTTAGAGATCCAATCAATAAATGAATATGAGAGATATCTCTGGACCCTGGTCCACG
ATCTCGGAGTACAGCTGAAGACGTCAGCTTACTGCACCGGAGTACAATGTATCAGACAAG
GGAAGTTTGACCTCGAACATGCATTGCTGAGGAAACATTGGCAACTAGAACACATAGTCA
ACAACATGAATACTTGTAGAGAGATCTTGGAAGAAAATGAAAACTTATTAAGACCAGATT
CAGCAATATTGAGCTTGTAGAGAAAATTAATTGGTGCCTTATTTTCTACTGTAAATTGGA
TTGTGTTGTGCCAAACCATACCAATC
(986 bp)

- SilkBase 1999-2023 -