SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp25809_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_retinoblastoma-like_protein_1_[Papilio_machaon]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005667 C transcription regulator complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007049 P cell cycle
GO:0008134 F transcription factor binding
GO:0016032 P viral process
GO:0016568 P chromatin organization
GO:0043550 P regulation of lipid kinase activity
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051726 P regulation of cell cycle
Transcript
Level		FPKM:3.91 TPM:3.29
ORF EntryO_TrvaMG10351_complete:A_TrvaMG_comp25809_c0_seq1
Sequence
(Nucleotide)
AAATTTGTCAATTTCGGGAGCACTTTGTGCTATTTATTTTTTCAATCTTGTGTTATTAAA
TTAGTTTTATAAGAATTCAACTTAAATATTAAATCAATTACGCGTTCATCATGCCGAAAT
CAGAGGAAAATGAAGATTGGACTGAGAAGATGGATGATCTTTGTTCAAACTTGAACGTAG
ATCCATCAGCTGCGAACAAATCAAAAGAATCATTTTCTGAAATAAAACGAAACTACATAC
TAGATGGTGATGAATTACACTGGATGGCTTGTGCCTTGTATGTGGCTTGCAGAACATCAG
TTACTCCTACAGTACAGACGGGGAAGGTTGTGGTCGGGAACTGTGTCAGCCTTACCAAAC
TCTTGAGGTTATGTAATTTAAGCTTAATTCAGTTCTTCAATAAAATAAAGAACTGGATGG
AAATGGCATCAATGTCAACTGATTTCAAAGAAAGGATATCACGATTGGAGCACAAGTTTG
CAGTATCATCAGTTCTCTTCAAGAAGTTTCAGCCTATTTTCATGGAACTCTTTGTTGGGC
TAACTAGTGAACCTGTGAAACCAGTCTCTAAGAGAAGGCCTAAAATACAGCCTTGTTCAA
CAAATGCTCTATTTGAGTTCACATGGTGCTTGTACATATGTGTGAAGGGAGAGTTCCATG
ATTCAGCTAATGACTTAGTTGATATGTATCATGTGTTATTATCATGTCTAGACTATATAT
TTGCGAATGCCTTTATGGCACGGAGAATTGATATAATAAATCCAGAATTTAAAGGTTTAC
CATCAGATTGGCTTAAAAATGATTTTAAACTACCAAAAACTCCACCATGTATTATTTCAA
CCCTCTGTGAGATAAAGGATGGATTATCAAAAGAGGCAATTACAATGAAAGAATACAGTT
GGAAGCCTGTTATTGAGTCATTCTTTGAAAAGGGGATATTAAAAGGCAACAGTGATTTAA
CACTTGGTATTCTGGATACTGGCCGATTTGATGTAAACTTGAAGTCACTAAACAACTTAT
ATGAAACATATGTACTTAGTGTTGGGGAATTTGATGAAAGGATATTTTTAGGAGACCAAG
TAAATGAACAAATTGGAATGAAAAATAAGGTCTCTGGTGATGAAATTTCAGAGGTGATAG
CTAACTTTGGTCCTAGTGGTCGCGCCTGCCCCGACACGCCGTTGACGGGTCGCCGCTACC
TGTCGCGTCGCAGTGAAGAGCTCACTCCGGTCTCTGAAGCCAAGAACAGCCTCGCGAGAC
TGGCAGCTACATTACGGAATGCGAGACCGCATCCATCACCTACACTTTTGAGGCTTTTCG
CAGATTGTGGTGTAAGTGAAGAGATGATAAACACTAAAGTGATCAAGCCCTGTAATGGTT
GGATGCAGCTGTTTGAGGCGAGTTTGCGGGAAGCGCACGGCACACCGCGTTCTGAGACCA
CATCTATGCGCTGTAATATGGTCACGTGTCTATATTATAAAGTATTCGAACATATCATCA
AGGAGGAACATAGGAAGAAACCACAGGTTTCATTACAGATGTTGTTATCACAAGAGACAT
ACCAGCTAACAGTATATGCTTGTTGTACGGAGATTGTGCTTCACGCGTACGGAGTGAATT
CATTCAAGTTTCCCAGAGTACTGCAGATATTCAACTTAAGCGCATTCCATTTCTACAAGA
TTATTGAGTTAGTTGTGCAGGCTGTTTTCGATAAACTCAGCCGTGATGTCATCAAACATT
TAAATGCTGTGGAAGAAGAAGTTCTAGAATCATTAGTGTGGACTTCAGACAGTCCTCTAT
GGGATCAGCTTAGTAAGACACCCGTGCCAGCTTCTGCTGATGTCTCAGTACAAGATTCAC
CATTCAGGAGGACAAATGGTCTACAATCGCCAGTCTCCACGATAGATCGGTTTATGTCTC
CGATGGCAGAACAAGCAAAGAAACAGCTATTTAAAGATCCTATCAGGCCTGGCCAATCAC
TTTTAGTACAAGCAAACACAACTCTAACGAGAGAACCTGTAGCTTCGACATCTACATCAC
AATCATCACATAGTAATTCAACCAATGAAACTACACTCACATCAACGCCTAAGAAAAACA
ACTCATTAATATTGTTCTTTAGGAAGTTTTATAGTTTAGCAGTAGTACGTATGAATGATT
TGTGTACGAGATTACGATTAACAGACGAAGAATTAAAACGTAAAATTTGGACATGTCTTG
AGTACTCCATTATGCATCAGACACATCTAATGAAGGACAGACATCTAGATCAAATACTGA
TGTGTTCCGTTTATGTTATATGCAAGGTATTAAATAATCCATCAAATAATCAAGTGGAGA
AGACGTTTGCTGAAATCATGCGATGTTACCGACAACGCCCATTGGCTGATAATCATGTTT
ACAGATCCGTACTTATTAAACAGAGCACAGGAGAGAGTTCACCAGAAAGAGGAGATATAA
TAAACTTCTACAACAAAGTCTACGTACAGTGTATGCAGAAATTCGCATCGAAATTTTCTG
GAGGACAAAAAGATAAGTGCAGCCTGTCCCCACTGCCGGCGGGGCGGTGCGAGGCGCGGT
CTCCGGCCGGCACGCGCGTGTCGGAGCGACACCAGCTGTACGTGAAGCCGCTCACCGACC
CGCCGCCGCAACACAACCATCTCACCTACAGGTTCAGCAGGAGCCCCGCTAAGGATCTCC
AAGCTATCAACAGTCTGGTCTGGTGCGACACGGGGCTGGGCTCAAGTGCAGGACTGAAGC
GTGCACTGGAAGGTGCATTAGACAGCGATCCTAGCAAGCGGAGTAGAGCCGCCCCCGCCG
TCGCCAGGAAACTACATCACTTGTTGAGCGACAGGCAGGCTGTTTAGAGGTTCCCAGAAT
TCGTCCATACAGCAAAATACGAGTCTAATGAATTTATGTTTTTAGTCATTTTCATTTAGT
ACCAAATATTTGCTATTAGCTCTCTAGCTGTGCTCATATTATAAAAAAATCTATTTGACG
ATTTTAATACTAAATCATATTTTTATATTGTAAAAGTAGTCACAATAATCAGTTTTTTTT
TCATAAAAATCAATTCTGAATTCATAAAAAATCATAATTGCATAATGTTGGTGCCTTGGC
ATCATACTCAATATTCCTTACTGACAAAACATTGCATATTGATCTCATATTATTTATGTT
GAATGTATAGTATTGATATGCCATAGTGGGAAAGTTGCTCATATCTTGTGTAAGATTTAG
TTGAATTTCCATTGGCTATGTCAATATTAATTGATGTTTGTAGACATGTGATGAAACTAA
GATTTTTATGTAATTTATTTTAAGTATGGTTGCCATTTTATGTTCTACGATGTAGACATT
TTTATTTTTCATTATTGATTTGACTGTAACTTATTTTACTCACAAAACATTGAAGCATAC
ACATAAACTTGATGTGAAAGAGAGTTCCTTTAACATTTTTTATTATTTAAAAGCGAAG
(3478 bp)

- SilkBase 1999-2023 -