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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp25794_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_polyadenylate_binding_protein_2_isoform_X1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000289 P nuclear-transcribed mRNA poly(A) tail shortening
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006378 P mRNA polyadenylation
GO:0006397 P mRNA processing
GO:0008143 F poly(A) binding
GO:0022008 P neurogenesis
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:0.90 TPM:0.76
ORF EntryO_TrvaMG10245_complete:A_TrvaMG_comp25794_c0_seq2
Sequence
(Nucleotide)
ATATGACTGACAACAGTCTCGGATGGGTCATGTTACCAGGCGGGGGATGAGGCAGCAGCC
AGGGAAGATGCAGACCTGGCTGTCATCAAGGCTCGGGTGCGGGAGATGGAAGAGGAAGCC
GAAAAACTAAAACAAATGCAAACTGAAGTGGATAAACAAATGAGTATGGGCAGCCCACCG
GGACTGACAAGTCCGTTAAACATGTCAGTTGAGGAGAAGATAGAAGCAGACAACAGATCA
GTATATGTAGGTAATGTGGATTACGGAGCCACCGCAGAAGAGTTGGAGCAACATTTTCAT
GGTTGTGGATCTATAAATAGGGTTACAATTTTATGCAATAAGTATGATGGTCACCCCAAA
GGTTTTGCTTATATTGAATTTGGTGACAAGGACAGTGTACAGACAGCTATGGCTATGGAT
GAATCATTATTTAGAGGAAGGCAAATAAAGGTGATGCCAAAGCGTACAAACAAGCCGGGC
CTGTCGTCGACGAACCGTCCGCCGCGCACGATGCGGGGGCGCGGGCGCGGCGGGTACCGC
GGGGCCCCCTCCTACTACTCGGGGTACCGCCCCCCGCGCCGCGGCAGGTACGTGCCTTAC
TGACCCCCTCCCTCACCTCTCCCAGACACACGCCCGCAACACACTTAACACGTTCACTGA
CAAACGTGAATTTAGTCACAGACCTATATGGGTCAAAATGGTCTAAATATTACAATGCTT
GTGAGAACTAGATTAAACCCAGTTTCAGACGTGCTAATAAGTATGGGAAAGTTATTTCTC
AGCCTGCTTTTATACGACACCAATCTTGTACAAAGTGGCTGATTTAGCTTGTCTAAACTC
GCCGAAACATGTATTTATGTAATTATTAGCCAGTGTAAAATTGGCTTTAGATCCTCATTT
CAAGTCATTATGTATAACTTGATGTAATGTTTAAGTATTATTGCAGCGTTCAAATAATTA
TTGGGAATAAAACTGAATATCTCAACTGAATTTCCTTAAAGATTGAGTCCATTAATAAAT
TAAGTATTACTATGTTAAAGATAAGCCCAGCATTAAGCTAATTGATGATAGGGTAGTTAT
GGGCTAAAATGCAGTGAACGTGTTAATATGTCGCACGATAATCGTTTAACCGCGATGTAC
GACTAATTAAGACACAGAATTTTGGGGATTTGTTAGTTTTCTTACAACCATAGTTCTGTC
TTTATTTCATTTCTTCACGACTCTTGGATTCTATGTATGAACTGGGTGAAAATTAAAAGA
TAGTACATGTTGAAAGATATTATAGGCGACAATCATAATTTATCGCCTTAATAAACATTA
ATGAAAGTTGTTTAAAATTCCTGCAAAACTATTGTCACTTACACGAACCAGCTGACGGTG
GGGGTTCGGGTCGCGCGAAAACATGGAAAGTTGCATATCAATGCTTAGACAACCGTCCAT
ATTTAAAAAATTTCGGGGCTAATTTGGTAAAAGTTTAACTGCTTATTTTTTATTTATATT
CGGATTCGGTAACATCATATCACTCCTTCAATATATAATATCCTTTTATTTTCATTCAGT
TAACCAATCCCACGCGTCTTGCACCGAAAACGAGTATTCAACAGCGATGCGCGATTGTTT
ATAAACAATATATTCTCGATTGTCGATGCTAAATCAATTGTCGACAAAACAGATTTTTTT
ATAACAACGAATAATAAAATGTATAATTAGACGAAAAATAAAATATATAATTGCTCATCG
CTGCATCACAATACAACAAAATGTTTTGTTAATTGAACAGATTGTTTAAAGTTCAGTTTT
GTTAATATATTTTTGTATGAATTGAAAATTAAATAATTAATTGATTTGTGTTGTCTGTGT
CATATGTTTAGATATGAGATGGGCTTATGTTGCATTGTAGTGATATCTCGTAATATCGGG
ACTCTAAATTATATTGTATCTCATTTGAAATGCTTACAAACTGAATTGTAATTATTTTAA
TGCTGTCAGCATGTTCAATTTATTTTAGCATGCACATTCTTTATCATTTTATTTTTGTAA
TAGTGGCTTCAAATATGTTCTGTTTTTCCATTGCGAAAATATTTATTTGCGCATCTGGTT
GTTTAATTTCAGTACATTTTTAAATTTAAGTACAA
(2135 bp)

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