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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp25794_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		polyadenylate_binding_protein_2_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000289 P nuclear-transcribed mRNA poly(A) tail shortening
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006378 P mRNA polyadenylation
GO:0006397 P mRNA processing
GO:0008143 F poly(A) binding
GO:0022008 P neurogenesis
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:17.63 TPM:14.85
ORF EntryO_TrvaMG10244_complete:A_TrvaMG_comp25794_c0_seq1
Sequence
(Nucleotide)
GTTTGGTTTTGTTTAGCCAAAGAAAGATGCAATATTTCATTTTAGAATGAATCCGCAAAT
ATCTTACAGAAATTAGTGACTTTATAAAATACGAATGCGTTGTGTGTATAATAAACTATT
GTGTTAGTTTTCGTGAAGTGTATTTTATGAGTAGGTCAACTGCTTCAGATTTGGTTACCG
TACATTAAATCGTCTGATTCATGATCGTGAAACCCGGTGGAAATGGCCGAAAATGACGAT
TATTTAGACTCAATTGAGAACAATCATTCGGAAGGAACTAACGGCTCTTTGAATATGACT
GACAACAGTCTCGGAGCGGGGGATGAGGCAGCAGCCAGGGAAGATGCAGACCTGGCTGTC
ATCAAGGCTCGGGTGCGGGAGATGGAAGAGGAAGCCGAAAAACTAAAACAAATGCAAACT
GAAGTGGATAAACAAATGAGTATGGGCAGCCCACCGGGACTGACAAGTCCGTTAAACATG
TCAGTTGAGGAGAAGATAGAAGCAGACAACAGATCAGTATATGTAGGTAATGTGGATTAC
GGAGCCACCGCAGAAGAGTTGGAGCAACATTTTCATGGTTGTGGATCTATAAATAGGGTT
ACAATTTTATGCAATAAGTATGATGGTCACCCCAAAGGTTTTGCTTATATTGAATTTGGT
GACAAGGACAGTGTACAGACAGCTATGGCTATGGATGAATCATTATTTAGAGGAAGGCAA
ATAAAGGTGATGCCAAAGCGTACAAACAAGCCGGGCCTGTCGTCGACGAACCGTCCGCCG
CGCACGATGCGGGGGCGCGGGCGCGGCGGGTACCGCGGGGCCCCCTCCTACTACTCGGGG
TACCGCCCCCCGCGCCGCGGCAGGTACGTGCCTTACTGACCCCCTCCCTCACCTCTCCCA
GACACACGCCCGCAACACACTTAACACGTTCACTGACAAACGTGAATTTAGTCACAGACC
TATATGGGTCAAAATGGTCTAAATATTACAATGCTTGTGAGAACTAGATTAAACCCAGTT
TCAGACGTGCTAATAAGTATGGGAAAGTTATTTCTCAGCCTGCTTTTATACGACACCAAT
CTTGTACAAAGTGGCTGATTTAGCTTGTCTAAACTCGCCGAAACATGTATTTATGTAATT
ATTAGCCAGTGTAAAATTGGCTTTAGATCCTCATTTCAAGTCATTATGTATAACTTGATG
TAATGTTTAAGTATTATTGCAGCGTTCAAATAATTATTGGGAATAAAACTGAATATCTCA
ACTGAATTTCCTTAAAGATTGAGTCCATTAATAAATTAAGTATTACTATGTTAAAGATAA
GCCCAGCATTAAGCTAATTGATGATAGGGTAGTTATGGGCTAAAATGCAGTGAACGTGTT
AATATGTCGCACGATAATCGTTTAACCGCGATGTACGACTAATTAAGACACAGAATTTTG
GGGATTTGTTAGTTTTCTTACAACCATAGTTCTGTCTTTATTTCATTTCTTCACGACTCT
TGGATTCTATGTATGAACTGGGTGAAAATTAAAAGATAGTACATGTTGAAAGATATTATA
GGCGACAATCATAATTTATCGCCTTAATAAACATTAATGAAAGTTGTTTAAAATTCCTGC
AAAACTATTGTCACTTACACGAACCAGCTGACGGTGGGGGTTCGGGTCGCGCGAAAACAT
GGAAAGTTGCATATCAATGCTTAGACAACCGTCCATATTTAAAAAATTTCGGGGCTAATT
TGGTAAAAGTTTAACTGCTTATTTTTTATTTATATTCGGATTCGGTAACATCATATCACT
CCTTCAATATATAATATCCTTTTATTTTCATTCAGTTAACCAATCCCACGCGTCTTGCAC
CGAAAACGAGTATTCAACAGCGATGCGCGATTGTTTATAAACAATATATTCTCGATTGTC
GATGCTAAATCAATTGTCGACAAAACAGATTTTTTTATAACAACGAATAATAAAATGTAT
AATTAGACGAAAAATAAAATATATAATTGCTCATCGCTGCATCACAATACAACAAAATGT
TTTGTTAATTGAACAGATTGTTTAAAGTTCAGTTTTGTTAATATATTTTTGTATGAATTG
AAAATTAAATAATTAATTGATTTGTGTTGTCTGTGTCATATGTTTAGATATGAGATGGGC
TTATGTTGCATTGTAGTGATATCTCGTAATATCGGGACTCTAAATTATATTGTATCTCAT
TTGAAATGCTTACAAACTGAATTGTAATTATTTTAATGCTGTCAGCATGTTCAATTTATT
TTAGCATGCACATTCTTTATCATTTTATTTTTGTAATAGTGGCTTCAAATATGTTCTGTT
TTTCCATTGCGAAAATATTTATTTGCGCATCTGGTTGTTTAATTTCAGTACATTTTTAAA
TTTAAGTACAA
(2411 bp)

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