SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp25768_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_protein_vav_isoform_X3_[Bombyx_mori]
Ontology
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005575 C cellular_component
GO:0005622 C intracellular anatomical structure
GO:0007015 P actin filament organization
GO:0007155 P cell adhesion
GO:0007391 P dorsal closure
GO:0007409 P axonogenesis
GO:0007411 P axon guidance
GO:0007417 P central nervous system development
GO:0007424 P open tracheal system development
GO:0007520 P myoblast fusion
GO:0008360 P regulation of cell shape
GO:0016477 P cell migration
GO:0030676 F guanyl-nucleotide exchange factor activity
GO:0031532 P actin cytoskeleton reorganization
GO:0035011 P melanotic encapsulation of foreign target
GO:0035023 P regulation of Rho protein signal transduction
GO:0035556 P intracellular signal transduction
GO:0046872 F metal ion binding
GO:0072499 P photoreceptor cell axon guidance
GO:0090630 P activation of GTPase activity
Transcript
Level		FPKM:2.94 TPM:2.48
ORF EntryO_TrvaMG10194_complete:A_TrvaMG_comp25768_c0_seq1
Sequence
(Nucleotide)
TTTATGGTATCGTGTAAAGTTTTGATTGTCGATCAATAAACAAAGCAATGTGATTGTTAG
AAGTGTATGTATTGTGTGGTTTACGATCGTTTGGTAACGTTGTCGATGCGTGCGCAGCGG
CGAGGCGTGCGCGCCGCGGGCGGCCGACGTCGGTGAGTACTCCAGCTACTGCGCTCGCAT
ACACGACGAGGAGATCTACCACGACCTCTGCGCTGTCAAGAACAACAGGGATTTCACTAC
GCCGACGCGCACTTTTCACACATTAGCAACATCGTCACACAGTTTGGAGAAGAGGGATTA
TGTTATTAGAGAACTCGTGGACACAGAGAGCAATTATGTGGATGTTCTAAGCAAAATAAT
ACAACATTTCATGAGGCCTTTGATGCTATATTTAAAACCGCAGGATTTGCAAGTCATATT
CTTTGGGATTAAGGAACTGTACGAGATTCACTCCGGTCTGCTCCGTCAGCTGAAGTTGGC
GACGGAAGCGTGCGTGCCGGGCAGCGGGGCGCCGCGCCTCGCCGACGTGTTCCTCGCGTG
GAGGGAGAAGCTGCTGCTGTACGGGGACTACTGCTCCAACCTCACGCATGCGCAGGACAC
GCTGAAGTTGTTGGACGCTAAGGATAACACGTTCAGTAAACAGCTGGCGAAATGTCAAAA
AGAACACAGCGACGGTAGAATACAACTGCGCGATATACTGTCGGTGCCGATGCAGAGGGT
GCTCAAATATCACCTGTTACTGGACAAACTAGTACACGAAACACAACCAAATCATGAAGA
GTTCCGTGGCCTGGAGCGAGCTAAAGAGGCGATGGTGGATGTAGCGCAATACATTAACGA
AGTGAAGCGAGATAGTGAAGTACTCGCACTACTCGCTAATGTACAGGATAGCATAATAAA
CTGGGAAGGCGCAGTCCTGGGCGCGGGCGGGGCCGGCCTCGCGGCGTACGGCCGACTGTT
GCTGGACGGAGAGCTGAAGGTGAAGGCGCACGAAGACCAGAAACTCAAGACTAGATATGT
CTTCGTGTTCGATAAGCTGATGCTCTTGTGTAAGCCTGTTAAGGAGAACCAGTACCTGTA
CCGCGTGGGAGTGCGCCTGGCCGAGTTCCGCGTGGAGGAGGGCAACAGCCGGCGCACACT
GCGGACGGACGCGCGCTGGGCCTCGCACTTCTACCTCGTGCGCCGCACCAAGGACTCCAC
CTACACGCTCTACGCGCGCACCGACGACTGCAAGCGGAAGTGGGTCAAGGCCATCAAGGA
CGCCATAGACAATTTAGAGCCAGCGGGATGTCGGAGCACGAGTCACAAGTTTGTACTGCA
CACGTTTGAGAAGGCCGCGACGTGTCATCACTGTTCAAAGTTCCTCAAAGGCAGAATATT
TCAGGGGTACCTATGTTCTGTGTGTAACGCCTGCGCACACAAGGAGTGCATCGCTCTATC
AGGTCGGTGCGGAGGAGGCCTGGCGCCCGCCCCGCCCCTCCCCCCACACCATCACCAGCC
GGACAACGCGCTGCACTACTACATGTGGTACGTGGGTGAGATGGGTCGCGAGACGGCGAC
GGCGCGGCTGGAGCGGCGCGTGGACGGCACGTTCTTATTACGTGTACGACCGCAGCACGC
CGCACACCCCGCCGCTCACCCCGCTAACGACACGCACTATGCGCTCTCACTCAAGACGGA
CAACACAGTGAAGCACATGCGAGTGTGCCGGAAGCCTATAGATCAGATCCCGCACTACTT
CCTGTCGGAGTCACGGTTCTTTAGGAGCATCGTGGAACTCGTCTCCTACTACGAGAAAAC
CAGCCTCTCTGAGAACTTTGAAGGTTTGAACTCAAATCTCCGCTGGCCGTTCCGTCGCGT
GGTGGCCACCGTGATCCACGACTTCCGACCGCTGGAGAGCTCCCAGCTGGCGCTGCGGCC
CGGCTCCAAGGTGCTGGTGCTCAGCAAGGAGGGCGACTCGCGGGGCTGGTGGAAGGGACG
GACGCTCGATAAGGGCGACAACAGATCGGGCTACTTCCCCAAGGAGTGCGTGCGCGAGGA
GCCCGAGTGTATCGGCGCGCTCGACTGATGTCGGCTGTGTCTCGCCGAGCGAGGCCTGCA
CTACGTCACGCCGCACGCCACGCACACGTCCGCCGGCGAACAGGACGACCTCGTCTAGGG
ACAACATCCTGTAGCTAGCTGTCGAAAAATAACACCCTGTAGCTAAGAACTTTCAAAAAA
GTACACCCTGTAGCTAAAAACATTAAAAATGAGAAGGCCTAGTTACAAGCCGTTTTTAAA
CACCTTGTTATCTGTGTGTGTTAAGGCGTGCAAAGACTCTGAACTTTAGATGGACAAGTA
AGTGTCACAATGTTTTTGTGTTGTCTTTAAGTGTATAGAATGAAATGTGAATGTAAATAA
ACGTTTTGTCCCCGAACGAAGAGGCGACAACCCAGTGCCATCCTCCTCTTGTCGTTTATG
AAAAAAAGGGATAGCAAATATAGAAAAATGTATTTATTTAGCATTTATCAGAGTAGAATC
TATTTATCATTGTGAAATATGGACCTCTATATCGAAGTTGAACCTTCTGTAGTTTATATT
GCTGTTGAAATGAAAATTTTAGTGATTAGAAAAACGTATTTTA
(2623 bp)

- SilkBase 1999-2023 -