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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp25758_c0_seq4
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_heat_shock_factor-d_isoform_X1_[Bombyx_mori]
Ontology
GO:0000785 C chromatin
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0009408 P response to heat
GO:0022008 P neurogenesis
GO:0031427 P response to methotrexate
GO:0042742 P defense response to bacterium
GO:0042802 F identical protein binding
GO:0043388 P positive regulation of DNA binding
GO:0043565 F sequence-specific DNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0050832 P defense response to fungus
Transcript
Level		FPKM:2.74 TPM:2.31
ORF EntryO_TrvaMG10174_complete:A_TrvaMG_comp25758_c0_seq4
Sequence
(Nucleotide)
AAATTTTTTGTGTGCGAAAGTAATCTGTGAATGTAATTAAAATGGCGATTTGAAGTGTAT
TCTTTGTCGATTTTGATTATTTTTAAAATAACACCGTGAGCTTTTTACAAAAAGTGGTAT
TTCTTAAGTGATTGTAGTACATATTATCGTAATCATGCGTTCTGTTGTAGAAATCGGGGC
TAGTGTCCCTGCATTTCTCGGTAAACTATGGAAGTTGGTGAATGATACTGAAACAAATCA
TTTGATTTCTTGGAGCCCGGGAGGAAAAACATTTGTGATAAAAAATCAAGCAGACTTTGC
CAGAGAATTGTTGCCACTGTATTACAAACACAACAATATGGCAAGTTTTATACGACAACT
TAATATGTATGGATTCCATAAAATAACATCTGTTGAAAATGGTGGGCTGCGATATGAAAA
GGATGAAATTGAATTTTCACATCCTTGTTTTATGAAAGGCCATGCTTATCTGTTGGAGCA
TATAAAAAGAAAAATTGCAATACCTAAAGCAGTAGTAACCAGTAGTGAGGGTGGTGAAAA
GATTTTATTGAAACCAGAAATTATGAATAAAGTCTTAGCTGATGTCAAACAAATGAAAGG
AAAACAAGAGAGTCTTGATGCTAAATTCAGTGCCATGAAGCAAGAGAATGAAGCATTGTG
GAGAGAAGTAGCTATCCTCAGACAGAAGCACATCAAACAACAGCAGATAGTAAATAATCT
TATACAATTCTTGATGTCTTTGGTGCAACCAACAAGACCGCCCAATTCAAATGGTAATAA
TGTTGGAGTAAAGAGGCCATATCAATTAATGATAAACAGTGCAGCTCATAATTCAAATAC
TGAAAGCAACTATCCCGGTAGATTGAAAAATATAAAGTTGGACAAAGATCAATTATTGGA
AGAAATTAATGATGAAAACTTGGAGGATGGACCCACAATACATGAGTTAGCTCATGATGA
AATGTTACATAATGAAACATCCCAAGATTCAGTACACCCAACATTCTTTGTTGCTACAGA
CTTGGGCAATGCGAACATTAATACAAATGTTATAAACCCACTATCCAATGTTCAATATCA
TGTAACTTTGGAAGATGGTGATGACACAGAATCAGGAGCAAACCGAGCCGTATATCCTAT
GTTGAAAATAAATGGACTGAGAACAAATGATAATGTGCCGGTGATCACATCACCATCTCC
AACTCAAATCAACCCTGTATCTCCTTTGAATGACAACACCCCTGTTGTTAGTAATAGCTA
CACACTTGCACCAAGTACTTCAAAGATCAAACCTCGTGTGAAGACAAACACTAGAACTTT
AGTATCTCCAAGCAATTTCAACAATATAAATCCAGCTGATTTCAAGCTCCCAGCTGAAAT
ATTTGCAAGTGATGACTCAATCAGCGATGGTAGCATATTAACAGCAGAAGAAACTGGAAT
AGAAAATATACTTCAGGATGTTGAAGTCAATGACATGGTACATAAAGACAAAATGCTGGG
TGGCATTGACATAAAAGTAGAAAGAGTAAATGAAGAATCAAAATCATCTAAAAAGAACAA
GAAGTCCAATAAAGAAACACAAAATGTTAATCTAGCCGCAATCAAGACTGAGCTTCAAGA
TGAGTTTGACTGGAACAATATGACTCTTGCCACAGTCAATAATAACACCAACATACTCAA
CAGGTATCAATCAAGGAATAGGAGAGATAACATCAGCAAAAATTGGGAAGAATACTCTTC
TCACTTTGGAACAAATTCTAACAAGAATGATATTGATGACCATCTGGATGCTATGCAGTC
AGATCTTGAGTCGTTACGGGAGTTACTGCGAAGTGATGGCTATGCGTTGGATACAAACAC
CTTATTAGGCTTATTTGGATCTGATGATCCGTTTTACGGTTTATCATACAACCCCGCCGA
TGAGAGAGCGAAATCATCGAATAATGTTGGTAAGTAAAATATATTTTTTCATTACAATCG
CCACAATTTACATTCCATCATCAATGGAGATTTTACAGGCATTTCGTTAGCTTCCTAGTC
GTGACTCAGATGTTTTCTAGAAAATATCTAGACTTGACAAATTACGAGAATGTCGAATTC
CAGTTACACCGTGGATCTTACAAGGAAAATAGCAAACACCTGATAAAACGTGTCATGAAC
CAAAATGTGCGTTTACGGTGACAGTGAGTTGTTTCAGCACTTAGTAAAATTTCGAAATGT
TAAACATAACAAACTCATTTACTCGCTCAGGTTTCATGTCATTATGGTTTGTAGTTGTTT
TATTACAAGTTTATGTTAATTGTAGATACAACCAAACAGTATCCGATGATTGATTTTGAT
TGGCTGATTGGTAACAGCGATGCCTCACCAGCAAAGTAGAATGCTGGCTATCTTCATTAT
CAAGAGGCACTGGCGAACATGTCCAGTACGCGTTCTCGTGACGTGTCGGATATCTTTGGT
AACGGGTTATGGATAGTTACACGGCCTGATGTTTGAGACAAAAGTGACAGTGAAAAGTTA
CCGTCTGGGACGAACCGTTTATGATGAACAATCAGCAGGGTCGTTGACTGATGCATTTTA
ATTACTTTGCGAGATTGATAACAAACACAGTATCACTTCTATGCGAGAAAAAAATATTGA
GCAATTGTACTTGTTTCACAGCGTTATAGCTTACTTATGACTTGTTTAAAATTAATGATT
GTTTTTACATTTGTTTACGTAATAATCCATTCTTAAAATTTAAAATCAGTCAGCGTCCCT
ATTAAGTTGACATCGAATATAAAACAGAATGCCACGATGATCACGTTTGTTGCGACATCT
TATGTGGTTACTGGGGCTCGTCTGTTAAATATAATATAATAGTATATCATAATTTAAGTC
GTAAATAAATTGTAACATTGTTTATTATCAATTAAAGCAAAGAAGCAGAAAGGTGAAATA
TCGATATTGAGCAGCGACGAAAACCGCGATGAGCAGTTAAATGACGTTGATGGTAGTAAC
TATATCTTTTGTAGACCGCTACAAGTAGTTATTTGTATAAGTTGCAATTTTATACTAATA
TAAGGTATGGCAAGATTAACAGTTAATATAAACAAACTCCTCGAATATTGATTTCCCTTA
AAATTAAAATG
(3131 bp)

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