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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp25750_c0_seq7
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_RNA-binding_protein_25_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0006915 P apoptotic process
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0042981 P regulation of apoptotic process
GO:0044822 F RNA binding
Transcript
Level		FPKM:3.56 TPM:3.00
ORF EntryO_TrvaMG10153_3prime_partial:A_TrvaMG_comp25750_c0_seq7
Sequence
(Nucleotide)
GGGGGCGGGGACGGGGGTGGGCGGCGGCGCGTACAGCAGCTGGTGCTGGTTGAGCGCGCG
CGTGTAGTTGTCGCGCGCGGCCTGCTCGTCGGTGGCTCGCTCGCGGCGGTACTGTTCCCG
CAGCGCGTCCAGCTCGTCCTGCTCGCGGCGTCGCTCGCGCGCGTCCGCCTCCGCCTCGCG
CACCCGCCCCGACAGGCGACGCTGCAGCTCCTTGCCTTTGTAATATTTGTGATCGTCTCT
CTCGTCGTCGTAGTCCTCGAGGAACTCCTTGAGTCGCTTGGCCTCTCGCTCGCGCTCATC
GTCTCTCGCTCGCTCCCGCTCCCGCTCCTTCTCGTACTCTTTGGCCTTGCGTCTCTCGCG
TCCCTCCCAGTTGCGTAACCTCTCCTGGTAGGCGGCCTCCTTCTCCTTAGCCTTCTTCTC
TATCCGCTTCCTGTCCCGCGCCTCCTCCTCGAGCTCCTTGTCTCTGCGCGCGTCGAGCTC
CCCCCTCCCCCGCGACCGCGACCTCTCCCTGTCCCGCTCTCTCTCCCGCTCGCGCTCTCG
CTCTCTTTCTCTCTCTCGCTCACGTTCGCGTTCACGTTCGCGCTCTCTTTCTCTGTCTCT
CTCCCTCTCCCGCTCTCGTTCCCTCTCTCGTTGTTCACGCTCTCGTTCCCGCTCACGTAT
TTCTCTTTCTCGTTCTCGTTCTCTCTCCCTCTCCCTCTCTCGTTCTCTGTCTCGCTCTCT
CTCGTCTCGTTCTCGTTCTCTGTCCTTGTCGCGATCGTCACGACGATCTTTATTCCTGGA
GAGACTCCTCCTGCGCCGGTCCCTGTCCCCCCTGTCCCTGTCCTTGTCTCTCTCCTTCGT
GCTATCTCTCTCTCTCTCCCTCTCCCTCTCCCTCTCCTTGGTGCTGTCCTTGTCCTTCTC
CTTGTCTTTCTCCTTCTCGTCCTTAGGTTTCCTCCTGCCAATCACTTCAGCCTCCTCCTG
TATCCAAAACCTCATGTCTCACACTACGAACTATATTCGAGCTAAGAATAGATACATTTC
TTCATTGAGACATATCTCATTATTCTTCTGAACACGAAAGACTTATCGAATGTACCACAT
CACATTGACACGAAAACCGCCATTTTATGACATTGTACATTTGCATTATGTGTATTTTTA
TTACGTATTAGTATCTAAGCTTACCTATTGTGATAGTGTTATAGCAAAGCTTTATCAATC
GCTTCTTCTATTCAGTGTTCGAAAAGCAATATTTAAATGATACATCGAAAAGATATATCA
CTTTTCTTAATGGCTTTCATCGTTTTACTCATTGATGTTGTAACATTTAGTTCTTGTATA
CCATAATATATAGAATAGTTGTAATGTTGAGACAATAAACAGTTAAACATTGTTGTTACG
ACATTCCCAATGACACCCTACCGCCAGGAGGAACATAGCTGTGTTGAACCTGTAAGGAAC
GCGGTCGGTGTATGTCTGTGTAGATACCGTGTGTGTACGAGTGTGTGCGGATATGTAGTT
TTTGTGACTGTTTATGTACTGTTTCATGAATTGTCGTTGATCATAAATAACTGCAATGTC
AGGGGACACTGCGGTGTCGCTACGGCCTGCTTCAGGGCTCTCTTCAAACTTCACCGAGAA
GAAGGACGAGTCATAGCGCTCGGTGATCTGTGTATGTATCGTGTTGTTGCGTCTCCCCGG
GTGGGTGTCCGGTGCTACTCACTGTCGGTGGTCGTGTAGTGTGCGGTGCCGCGGGGCCCT
CCCCCTCCTCCCGCCGCCACTCCCCGCGACGATCCCGCGCCGCTCCGCCGACACAACGCG
TGACGTCACCCGCGCCCGCCCGCCCGCACACACACACACACACGCGCACACATGTCGCAT
TCAACACGCAGGGAATCGGATCTCGTGCTCTACGCTATTCTATACTACCTCCCTTCGTTG
CCTTCGTCCTACGTTACAGTAATATTTCGATACTAAATGACAACATTCACAGTTCCAACG
CCACCACGACAATGTGGAACAATAAGTTATTTCTAGACATGTGAATGACGTCATAAAGTA
TGTAGTTACGTGAGGAATACAGTTCCATCATGAAATCTATTAAATCAGAAACCTATTTAA
GATTCTCTCTAACACAGAAATGTGATGATAAGTTTATATTTCAGGACAAATCAATCGCTT
CTTTTAAATTGTCGTCAGTTTTTAGCAAATTCTCAGTTCGTTCAATACAAAGCTATCTCC
GGTCATTGAACTCGTTTATTTAGCTTGATTTTCGTAAAATTACGATGACTATAAGCTGTG
TATAAGTTTGCCGCGCGCAGTTCAAATGTGAATTTACAAATCACTGACGTCAAGCTGAGT
AGAACTCATGGGGGTTTGCCCGACATCTTACCATTAAATTTCCGAATTAGGGAGAAACCG
AAAACTCTTCTATACCTTTTAATTGCTTCATTAAGTTTTGACTTCATTATTGCGTATTTA
TTATTTCATTTTCATCCAATTCCCTTGTGATTTTCAATTTGCAATTATTTTTTTATTATT
AGTTATTAGAATGACGATATTTTTTCACAACGGTATAATTTTCTACTCTCAACAGACAGT
ATAGTGGTTGCGGGTGTGTGCGTGACGCGGCGACGGATCGCTCGCTCACTACTCACGAAT
ATGAGCTCGCGACCGACGGAGCCTCACTACTACACGGATCAGTGTACAACATATCTGATG
TCAAGTGATCAGTGGCGGCCAGACCATAGAAGCAAATATGCGTTGCATACTCTGTCATGT
ATAAATAGCAACATAAAGTCGATTAAATGGATATGTAATGAAAATTTGTAAACAATTAGG
TCAAATCTATATTTCTTTATATCCTGAATTAAAATATACACGCCCGCCACTGGCAGTGAT
TGATGGTTGTTTATATAGGGTGCAAGTAAATCCGTTTACTAGTGAATTCTCCCACAGTAG
ATAATATAACTATGTGTTATGGTGTGTGTGGTGTGTATGTGTATTGTGACAGGTCAGTGT
AGTACTCACCGCGTGGAGCGCCACGCTCGTCCCCGCGCCGCCACCGCGCCACCTGCCGGC
CGCACACGTCAGCGCACGCACACACCCGCGCGCCCCACGCACACGCGCACGCACTCACAC
ACGCACGCACACGCGCACGCACTCGCGCACGCACACGCACACTCACACACGCACTCTCTG
ACGCACCAACAACAGCGCCGACGCTACGCCACGACTTGAACAAACTATCTGTTCTTTTAA
ATATGTTTCTATTATTAACCAGTTTGTTCCCCAAAATTCGACACTTACTAAGAACATATT
TCTTTACCTTTCTACATTTAATGAAGAATTACTTTATAATATTCTGGATATCTGTACTCT
AACTCCGAACTAAATCACATTACTGATCTAAAGCATATTATAAGTGAAACCATAGAGTTG
TCCATTGCAATCATTTTTTATCAAATTTACCAGTGCGATTGGAAGTATGGATAATACTCT
ATCGGAAAACATAATAAAAAAGCAACAGTTAAATAAGTAGCGCAGCACTGTTGTACACAT
TATAACGAGAGGTGCGACAGTACATTCTCACTGCGGGGCGGGGTGTGCTTGTGTGTCTCG
AAGGGGGGATGGGGGGAGTGCCGGGAGCGGGGGAGGGAAGAGGGACGGGAGAGGGGTAGA
CGGGCGCTAGAGGTTACTGACCTTCATACTCTCTCGGAACTTGCCGATCTCGCGGTGTAT
GACGTCACGCTTCTCCTCCGAGATGTCCGCCTCCTCCAGCACGCGCGCCGTCTTGGAGAT
CGCCTCCTCCTTCTGTATGATGTCGTAGTTGTTGATCTCGTCCTGGTACTCCGCGGCGAC
CTGCTGCAGCCGGACGCGCGCCGCCTCGTCCAGCGCCTGCTGCCGCGCGTCCAGGTAGCC
GCCGCCGCCGCCGCCCGTCTCCAGCTTCGACCGCTGCTCCGTTTTATATGAGTCGACGAG
TGCCTGCATCTTGCCATCAGTGCGAGCGAGCAGCCTCTTGTCTCCCAACTCCAGTTCATT
TAGCAGACGGACACAACGCAGCGCTGGCTCCGGACCTGCAAACTCGCAGAATCCGAAAGT
GGAGACTCTCTTCCATGTGAGCACCGTGCCGCACGCATTCAACATGGAGCGGATCATAGT
GTCCGGAGCACGAGATGATATGTTACCAATGAAGACTGTGACAGGAGGTCCTTCGGGTTC
CTTGGCTCCGTTAGTGTTCCTTGTGGGTCCGCGAGCAATTACGGCCTTCCCCCCGGCCTG
CGGAGCCCCGGGCGCCGGCAGCAGCGCGCCGCGACCTCCTGCGCTCGACGCGCCATACGC
ACCTACCATCACGTGAGTCGGCATCGACATGGTGACGACACCCGGAGCGATCCCGTACGG
CACCAGCGGCGGCCGCGGCGGGAACGACATCACACCGCACACTTTACACAACACTCGAAA
CCACAACGTCAATGCTTTACACAACACTCTTCCAATCTTTCACGTCTACTTTAATACAAT
CAATCACTCCAACTTCAGTTATTAGAAAAATTACTTATCGATCACAAGTATTTTAATTTA
TAACACACGTTTAACGTTCAAATAAATTAAAAAATCTAGTCCGTAGAAACGCCATGATAA
AAATTCACGAAAG
(4633 bp)

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