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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp25742_c1_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC105384968_[Plutella_xylostella]
Ontology
GO:0000213 F tRNA-intron endonuclease activity
GO:0000214 C tRNA-intron endonuclease complex
GO:0000379 P tRNA-type intron splice site recognition and cleavage
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006388 P tRNA splicing, via endonucleolytic cleavage and ligation
GO:0006397 P mRNA processing
GO:0008033 P tRNA processing
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
Transcript
Level		FPKM:2.15 TPM:1.81
ORF EntryO_TrvaMG10128_5prime_partial:A_TrvaMG_comp25742_c1_seq1
Sequence
(Nucleotide)
GTTTATACACATTACTCGTTAGGTAAATAGACGGGCATAACAATAGGTTTCATTTGCACA
TAAGAAATTGTTCCTAAGCCTACTACAGCGAATACTGTTGGCACGTCATCCTCGTATTTT
GATAGAAGGGTTGAAACTTCGGCCGTTGAAGGCAGACTAGAAGATTCGCTGATACAGCAC
AAACGAAAATCCGGTCTTGGTTTATGACTTTTCCTGAAATTCTTTATATTCTTATTATAA
ACATCGAAATTTACTTTGAGACTAGTTACTTCTGGAATGTGCGTATCCGATTTTATTATT
TGTAAATGGTTCATTAACTCTGACATTTTAGAAAACTCTCCCGGTTTTACTAAAGGTTGC
AGAGAACTATCAGAACTCATGGGAATTATTCTGTTCTGAAACTGTTTATTGCTCATTTCA
ATATATTTCAGAAACTCTATTTTAACTTCTAACCAATTTTTGAATTTATTCGGATATTGT
GCCAGGAAGGAGTAGATGAATCCGTCATTAAAAATATCATTTGTGAGAGCATTAGCTCCC
TGAGTTACTAATTCTGGTTTACCAAAATCATCGTCGCCTGGATACCAGTGTTTGTATAAT
TCTTTACGTTCTAAACTTAATTTTTCTTTAGCATTTGATTCATCAACTGAATTCAGATTA
CTGTCATCAACGTTCATAGCTAGATCTTGAGTTTCAGCAAAATGTTTCATCATGCTAAAA
GGATTTTTCAACTTTTTCGTAAATGGACTCGATTTATTTGTTTCTTCCTCAGAATCGCTA
TCAAGTATAATTTGCCTTCTATTTATTATTTCGAAATTATTATTCATATATATATCCGCG
TTAAACGAT
(849 bp)

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