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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp25742_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC106119141_[Papilio_xuthus]
Ontology
GO:0000213 F tRNA-intron endonuclease activity
GO:0000214 C tRNA-intron endonuclease complex
GO:0000379 P tRNA-type intron splice site recognition and cleavage
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006388 P tRNA splicing, via endonucleolytic cleavage and ligation
GO:0006397 P mRNA processing
GO:0008033 P tRNA processing
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
Transcript
Level		FPKM:1.75 TPM:1.47
ORF EntryO_TrvaMG10127_3prime_partial:A_TrvaMG_comp25742_c0_seq2
Sequence
(Nucleotide)
GAAATCTATGGAAAAAAATGTGCATTTAAATTAAAAGTTTTATAACAATAGCTTTACTAT
GTAATCGTGGAAAGTGAATATTGTTTATTCTGATAATTTCGTGTACATTTCTTAATAGAA
ATCTATGGAAAACGCAACATTTCTTAAAAACAATGCCGGACCCAAAACTGCTCTCTGGCG
AAGAATTAGTCGCTAAAGGTGTGACGCGGACCGAGGGAGCGCTTCCCGTTGTCGGACTGA
AAGATGTCGCACCAAATGGATCGTGGTTGGAGCAAAAACAAATACAAGTTGCTCTGGAAG
CGAGAAAACACTTAATCGAAGCTAATAGAATTGAAAAACAAGGCAGTTTATCCTATGCCG
AATGGAGGAATGATTTGAGACTTGCAGAAGTAATTAAACAGACGGGAGGTTATTGGCAAT
ACTACGGACATCATGAAGATAAGAAGCTATACCTCAGACCTGAGGAGGCATTATTCTTAT
TAGAAAGCAACTGTCTCCAACTTAAAAACAATGGAATAATAATGTCTATACAAGAAGCAT
ATTCCATTCTTCTCAATGATGAGCTATCTATTCTTCAATATCAATTGTACGCATCACTAA
GTAGGTTAGGTTGTAAAGTTTATAAACATGTCAAAGAAAAAATAGGAAAACCTGAAAATA
CAACAAGTAATCTAAATAGTAGTGAATCTAAAATGGATGTTGAATCTAATGAAGTTTCTG
AGACTACTAAAAAGGATTTAATTGAAACTGAGAAATCTGTAGAAATCATTGATAGTAATG
AAAAAGTTGAAGATGATGTAACAATGCAAGTAGATGTAAGTAATGATGTTAAGGAAAATA
ACAATTTGCCAATTGTTGATCGTCATATTGAGAATGTTTCTCAAAGTAACGTCATCAAAG
AAAATAATGATTCAGACGTTAATGTTAAAGATTCAGAAACAGATACAAACAAAGTGTCTG
ATACAAATATTGAAATGGCTACTGAAACCACAAGTAAAGCTAATGTAGCACCCAATATAA
ATGAGATAAAAGTAAGGAAACTACTTAATAGAAAATTGAAACCAACACTGGCTGTTACTC
TAGTGAAGAATTTTGAACAAGTCCCCGATATGTATCAGACAAGATACGTAGCTGCAAATG
TGCCTGATGATCAATACATACCTAAGAATATCTACGTAAACCAAACATCTTACACCCTAA
ATATTGAGAATATTAAATCAAAAGATAACACTAACACTAGTAATGATATATCCTATACAC
TCTCCGATGAACCAAATAACTTACTGAAGAAAATCGGAAATGGTTCAAGAAATGATACAC
CCACAACTAATTTCTATCCCAACATGAACAATCCAAGAATGCCCAATCAAAGGCCATTCT
TTTGTTTTAGGCCTCGTAATAACTTCAACTACTTTCATTTCAACATGTTTTTCCAAAGGC
CATTCCATCGATACTTTAATCCTCAATTTCAGTACAATCCACGTCCCCATCCTTTTAACA
GAACTTTCCATGGATTCAATCGTTTTGAACCGACCTTTTACAATGTGCAGAATAGACCTC
CAATTAAACGGCCTCAAAAATCGCGAGCGTACCATTTAAAAATAATTAAAAATCTTGCCT
CGAGATTGAAAAGATTAGAATCTGAAGGAAACATACAGTTATCGCATATACAGTCTATAC
AAAAGATTATACAGACATACAACATCAACTACCAATGCCAATTAAATCTTACGGACAATT
TCGATCTTATTGATGAAACAGCAGTTGTAGAAACTATTGAACTAGACACAGAAGAGGAAC
CTCAAAGAAAAAGGCAAAAAGTTACCACTGAAGATACATTTGCCAATAATTTTAATAAGC
TACAAGAACTAGCGCTAAAACTAAGAGATTTAGATGACTTAGATCAAGTTACGTCGCGAC
ATCGAAGATCGTTTTCAAACGCCATTAAAACATTCAACA
(1959 bp)

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