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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp25741_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_cysteine_protease_ATG4B_isoform_X1_[Amyelois_transitella]
Ontology
GO:0000045 P autophagosome assembly
GO:0000422 P autophagy of mitochondrion
GO:0004197 F cysteine-type endopeptidase activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006501 P C-terminal protein lipidation
GO:0006508 P proteolysis
GO:0006612 P protein targeting to membrane
GO:0006810 P transport
GO:0006914 P autophagy
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0015031 P protein transport
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
GO:0044804 P autophagy of nucleus
GO:0051697 P protein delipidation
Transcript
Level		FPKM:6.97 TPM:5.87
ORF EntryO_TrvaMG10125_5prime_partial:A_TrvaMG_comp25741_c0_seq1
Sequence
(Nucleotide)
GATTTTTTACGAATAACTCGCGAACTGACTTACGAATTTCATTTCGAAATAAAAATTTTA
ATTTATGTTCATTCGAATATAAACTATGCAATTCAATATTTAAAATGGATGCTGTATTTG
ATATGTGTTATTTGTCAGGAGTGGATGGTAACAATGTCGAACCTAATGATATTCCAAAAA
CAAAGGAAACAGTCTGGGTACTGGGGAAAAAATACAGTGCTATTCAAGATCTGGATCGCA
TAAGAAGGGATATCACTTCTATAATTTGGTGTACATACCGCAAAGGCTTTGTACCGATTG
GTGATGAAGGATTGACCTCTGATAAAGGGTGGGGTTGTATGTTACGATGCGGACAAATGG
TACTGGGTGTTTCTCTTGTTAGAGTACATTTATCTGCTGATTGGGTCTGGACTCCAGAGA
CAAGAGACCCAACTTATTTAAAAATTATACAAAGATTTGAAGAGAGAAAACAGGCACCAT
ATTCTATTCACCAGGTTGCTTTGATGGGAGCTTCAGAAGGGAAGGAAGTTGGTCAATGGT
TTGGACCTAATACAATTGCACAAGTTTTAAAAAAATTGACTGTTTATGATAAATGGAGTT
CACTAGCTATTCATGTTGCCTTAGATAATACTGTTGTTAAGGAAGATATATTACAACAAT
GTTTGGTTACCAATGACAGGGGAGACACATCTTCAGCACCTGATGGTGTAGTCTCGGATT
GGATGCCTCTACTGTTAATAGTTCCACTGAGACTAGGACTTAGTGAAATTAATCCAATAT
ATGTTGATGGATTGAAGATGTGTTTTCAATGTCCTCAATCAATTGGAGTAATAGGAGGTA
AACCAAACCAAGCTTTGTACCTCATTGGTTGTGTAGAAGATGAAGTTATTTATTTAGATC
CACACACTACTCAAAGATCTGGATTAGTTGAGAGTAAACTGACAGACGAACAAAAAGAAA
TGGATTGTACATATCATTGTAAATACGCATCTAGAATACCAATATTGGCAATGGATCCTT
CAGTGGCGGTGTGTTTCCTTTGCCGTACTAGAAACGACTTTTATGAGCTTTGTGAAACTA
TAGAAAAGGATTTTATGAAAGAAAACCAACCCTTGTTCGAAATATGCGAGAAACGGCCGG
CTCATTGGGGGCCAAACACCAGTGATATTGATCTAAAAAACACTTCCATTTTTACAGAAT
TTGAAGATGTAGACAGACAGTTTGACGACTCCGATGAAGAATTTGAAATTCTCTGAAAAT
TGAAGATCTTGTGGCCATATTGTGTAAATTGATGACATTGCGACCTTACGAAACCAAGTT
TGCAGTTTTATATTCCTCAGTTTTACAGTATGGCTATTATCTTATTTGGATAATGAACGG
AGATATTACATCACACACCAATTATTTTAAGTTTGGCATAGTAGAGATTGCATTCGGTAA
ACATGGAAACATGTAGGGTATGGCAATTAAAATATTTGAAATGCTAAATCATTTGTCTTC
ATTCAATTTCTTGTTTAAAAGTAGTTTAGTTGTTCTTAACATTTACAAGAAATATAATAA
TATTATGTTCATGAATTATGATACATTGAGCACTATTGAGGACTAATTTAGTTTTTAGTT
AAAAAGCATTAAAATACTTTACTGGTCTCTATTGTTAAATACCGTGCCAAAAATGCCGAA
TGTTTTATTAGCATGAAAATATTTTGTAGGTAATGATATTTATATGAATTATGTATTTGC
GAATGACGGCACATTTTAGTAATAGTTTTTATATGACTAGAACGTATATTTTCTTAGCGC
CAAGTGCTTAAACATAAGCTGTTGTTATTTGTTAAAATCCTTTGCAGTGCCTTTATATTG
TACAACAATTATTAATATAAATTTAAACATTCCTGATTTCGGAATCATTGTTCTTCTTTT
ATTTTATCTAGTCATTAATAGAGCACCTGATTTGTTAAAATTCGAAGGGAGTTCGATTTT
TATTTTTTTGTTAGATTTCTTTATCCATTGTATCGTGAATTATCCTACAGCGATTTTTAT
GTAGAGATATATATATATTGCCATTAGTTTTAATTAGTTGATATAATACGTAATATTATA
TTTCTTTGTATAGCATTACATTATAATATTATTTGTACGGCACATTTTTGCGGGCAGTGT
AAAAATGTTTGTTGAAGATAATTAAACTTATTAATTACGACTGCCAAAGACCTGAATATT
TTTATATTAAAGGATTATGAAAAGTTAAAAAAA
(2253 bp)

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