SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp25733_c0_seq3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_chondroitin_sulfate_synthase_2_[Papilio_machaon]
Ontology
GO:0000139 C Golgi membrane
GO:0005794 C Golgi apparatus
GO:0008376 F acetylgalactosaminyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0030206 P chondroitin sulfate biosynthetic process
GO:0032580 C Golgi cisterna membrane
GO:0050510 F N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity
Transcript
Level		FPKM:14.36 TPM:12.09
ORF EntryO_TrvaMG10117_3prime_partial:A_TrvaMG_comp25733_c0_seq3
Sequence
(Nucleotide)
TTTGTCGGTCGTCCTTCCGTTCATTTCTCAACATTTTTTATTTAATCTAACTGTGAATCT
TATCTTTTCTATGAAATAATCTAGATAAACTAAACAAGAGTCCATTAACTGTATAAATGT
GTGTTAACGTTGCTTAAAACTGCAGAACCGACACGATGTTCTCGCGTTGCCTTGTGTCTC
AAGTTAAACACAATTCTTACTTCCTGATTGGTTTATTCATCGGTTTGTGGGTTTCTTTGG
CTGTGATACCTCTTGATGAAGAAGCTGAGCCTTGCGTGGCGGCTGTAGGGAGCGCCGCGC
CTTTGATAGATGAGTTTATACCTCGAAGGGAAGAAAAGCCTGCAGGGGCGAGTCAAACTG
CTGGAAGGAGTATTCAACGACCTCGGTATTATAGTACGGAGCTGGGCATGAGAGGTTCTC
TTCTAAGTGGAATTTTAAGCTCAGAAGAAGCCCTAAAAATCCAAGTACCGGCCCTAAACC
GTACCGCAGCAAGATTACAACCAGCTCTGAAGTTCTTCATAACAGCATCAGCAATGAGCA
CCGTACCAGGACTTGCCAATGTCGTAGGATTCACTGACACTAGAGAAATGCTGAAACCGT
TCCACGCCTTAAAATATTTAGCTGATAATTATCTAGAAGAGTACGACTTCTTCTTCATTG
TTTCGGACACTGCATTTGTGAATGCTCGGAGATTAACGCAGCTGATATCTCAGTTGTCGG
TGAGCCAAGACGTGTATATGGGGAAGGTGGCTGACGGTGAAAGTCATTATTGTTCTCTCG
ATCACGGTATAATCCTGTCAAATTCGGTGCTAAGAGCGATACATAGTGAACTGGACTGGT
GTGTACGTAATTCTTATTCTCCTCATCATCATGAAAACATAGGCAGATGTGTGTTACATG
CTGCACATTTATCCTGCAACCCTGATTTACAGGGTGAACATTACTCTTCAGTAATGGTAG
AAAATGATCAGTTACCGTTAACAGAAGCTTTGGCTGATGCGGTCACTGTCTTCCCAATTT
CAGAC
(1025 bp)

- SilkBase 1999-2023 -