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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp25721_c1_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_probable_E3_ubiquitin-protein_ligase_HERC2_[Amyelois_transitella]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005814 C centriole
GO:0005856 C cytoskeleton
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043547 P positive regulation of GTPase activity
GO:0046872 F metal ion binding
Transcript
Level		FPKM:1.81 TPM:1.52
ORF EntryO_TrvaMG10082_internal:A_TrvaMG_comp25721_c1_seq1
Sequence
(Nucleotide)
CCGGTCCTGAGCGCAGGCTCCTCGTTGTCGTACTGGGCTTGTAATAGTTGTGGAAGGTGA
TGAAGCGCCGGCGGTATGCCCGCGGCGGGCTCCCCGTCCCCGGCGCCGCACACTACACCG
CGCAGACGACGCACGCACCATACGCGGGCGCGCCACGATAAAGTCGGCATTTGAGCGCAG
ATCGCCAATGCTTGAGCTAACCGAGGTGCGAGCTGATGATCATTTGATATAGCCGCTAGT
AAAGGCCCGTCTAATAACCGCCACGCCAGTTCAACAGAGGGACACGACAATACATAGCGG
TCCGATCCATTTTCCGCTATTGAATGTGCTTGCAAAATAGGATGAGCAGTAAACCTCCAA
CCCCATCCATTTACGGAACCATCGCTTGTGAATCGCCACCGAAGTTCGTCACCATTGACA
ATAATTTCTTGCGCCCAATCAGATGGTTCCCGACCGGATCTCGTGGCGAGAACTCGACCA
GTGCTATCGGATATCGTCAAAGGATCGTTCCTTCTCTCAGTTGAACATCCTTGTTCGAAC
ACCACACGTAACGACGAAGCTCCCGATATTTTAACAACACCTGAGATGTCAGTATCATCT
GCATAGGGATGTGGACTGTCGACGGTGATGGGTTGCGGCGGTGCGCGACCTCCTCCCGCC
GCTGCCTCTTCCAGTTCACACACACAAACCTCCACTACCATATCTGCTACTGCAGGCTTA
CTTGCGCACAGAGCCATGAGAACATCTTTAATTATTTTGACTGCATTGTTGGCTTCGGGC
ATTCTGCCAGCCGCCGCTAGTTTCAATAAATCGACGAGAGCCCTGGCGTCTGATTCACCC
AATTGAGATGTAAAATCGTCTAACACCATCTTAGGCGCTTCTGATTGTTGCACTGTCATA
GTAGCAGCTGCAACCGATACGGCGCTCGATGACATCACAGCGGAATGACGAGATGATATG
GAACCACTGAGGGGACTGCTTGCTCCACTCGGTAATGTAGCTCTATCGGCCGGAGCTTCA
CCGCCGCCCGTTCTTGCATCTCCATCGGCATCTTCATCCTCAGTATCAATGGCAGCTGAT
ACGGGAACGGATATTGATGACGCTTCGTGTGCCCTCAATGCTTCCACCAGAAGTGTGCGA
GCTTGACAAATATGCAATGATAGCAAGATCAGAGATAAAGCATGTTGAACAGCTACTGGT
GGTTCCAGAGCTAAGGCAGCTGCTGCTAAAGACGCTTTAGGTCCTTGAGGTTCTTCAACG
GTAGATTCTTCGGCATACAATCCTAAACTCTGCACGCCGAGCGGATCTTTCAGTGTGGGG
AAAGGCAGCGGCGCGACGTGCGGCGGCTGAGCGTCGTGCGGCCGCAGCGACCACGCCGCC
GAGTGGGAGGAACCGGCAGCCGCGCGCTGCACCCCCTCCACCCCGCCCACCACGCCCGGG
CGACGGTTCACGTACGTGGTCCCGTTGCCTTGCTGGCCGTGGTCGTTGTCGCCCCATGCC
CATACCTGATGATCGCTAGTAACAGCAAGACAATGTAGCGCTCCAACTGCAACGTGAATT
ACTCTGCGACCACGTAACGCTTCCACTAGTGTCGGACGACGGACGTGAGCGTCACAACCG
TGACCCAATCGGAAGTAATCGCCTTTACCCCAAGTCCATACCTCGCCATCTCTTGTCAAT
GCCAAACTAAATTGAGCTCCACATTCAACTTGCACAACTCCAAGCGTGTTCAATCTTTCT
ACGTTCATAGGTACAGCGCAGCCATCGGAACCACCACGACCAAGTTTTCCAAAATCGCCA
TCACCCCACGAAAAGACTTTCCCGCATGCTGTCAACGCTAAAGTCTGCGCATCCCGTGAA
CCGCAAGCTACTTGTATCACCCTAAAGTTAGATAACGCTTCCACCATTTTAGGAGCCAGC
TGAGTGGTATTATCACCGTGTCCCAATCTCCCGTACTCTCCTAAGCCCCACGTGTATAGA
TGTCCTCGCGCGGTGACGCACGCACTGTGAGCGGATCCACACGCCACGTTTACGACGCGC
TCGCCAGACAGTGCGTCTATCAGTCGCGGCACTTCTAATGTCAAGCGGTTACCGTGGCCT
AGTTTACCGTCTTCACCTTCGCCCCATGAGTAAACTTTGCCATCTGCAGTAAGCGCTAAA
GCATGTTTCCCTCCAGAATGTACAGCGACTTTCCTTACGAGTACGTGTGATAAATAGGGA
TTAGCTCGAGGTGTTGATACGTTGTTACTATGACCGAGGCCTAATCGACCATTAGTGCCT
TCACCACACGCATACAGTTTTCCATCATGTGATACAATAAACAAAGTTTTAGATCCTCCC
GCGATGTGTACTGGCCGTAACGCACTGAGTACAGGTGAAAATACTGGTACTTTTACTTTG
GAACCTTTTACGCCTCCCAATTGATCTTTATCGTTCAAACCCCATACATAGACTTTAGGA
CAATCATTAGGTAACGCTGGAGGATTATTATCTATTGAAACTGTATTTGAAGGGGTATCC
TTTTCCATCCAATCTTCGGCCACGAAATTCATACTCTGCAGTATTTCAGTGTAAAGCGG
(2579 bp)

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