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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp25721_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_probable_E3_ubiquitin-protein_ligase_HERC2_[Amyelois_transitella]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005814 C centriole
GO:0005856 C cytoskeleton
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043547 P positive regulation of GTPase activity
GO:0046872 F metal ion binding
Transcript
Level		FPKM:2.12 TPM:1.78
ORF EntryO_TrvaMG10079_5prime_partial:A_TrvaMG_comp25721_c0_seq1
Sequence
(Nucleotide)
TACAAAGCTGTAATAGCCCCACTGTTGTATTATTCAAGTTTCTAAATGGATGGAATGCTA
TAATTGAAATCATGCTCTTTCTCCACTATTAACATTAACTTATATTGTCATTACAATATA
AGGAAGTTCTACTGCTACACTCCACTACACATGCAATAAAAAGTTAAAATCACAATTAAT
ACTGAGTTCAAATGAGTATTGAACAGTAATAACAATGCAGTAGTAATGTTCTTAATACAA
ATAAATAATTAATTATTCAAGAAGAAAGAAGTAATGAGGTTCCAGTTTCGTACTACTGTT
TCTGTACTTTGTCTGATTTTTTTCAATAATTAGTATTATTACAACACAAATAATACCACA
AAACTCTTTCTAAAAAGATTTCTGGAACATACGCACATTTACAATGATAATCGCTAGTTT
CGTTTTAAAAACATCAAAAATAGTAATCAGTGATGATATTGGGCATTTAGTGATGAATGT
GGTGTTTATAAGAGGTAAAATGACATCAATCTCATAAAATATACTATTTTTAAGTTGATC
TTGTGAATTTAGGCGGTACGAAGTACAAATGCGATTGTTATAATGGTAATGATTTAATAT
GGTTTGGTGTGATGATTGTGAAATGAACGAAACATATAAAAAGTTTGTGTGATGGAAAAT
ATCCCTTTACCTAAAATATAAAAATGTCTCATAATGGAAGACCTTTTTAACTTATCATAA
ACTGAAACATTTACGATTCGTATGAGTATATTGCTTTTCGTTATCTGAGGTGGACCACTT
ATGTAATAATATTTTGAATAACATTCATCAAGGTTATTAATTAAAACTGAAGGTTGATGA
AACTAAACCATACTTTTTTATATGTTTATAGCAAGTTATTCAACTTGAGAAAAACAGTCA
TGTGTCCATATCACATGCCTAAAACTTTGAAATATAATCATCAGTCTCTCTTTGATCTGA
TGTTGTTTCTAATTATGATTGTGTTATCAATTGACTTCTTCGTGCCTGAAGCACTTTAGG
CATTGATTTCATCACTATAATATAGAGGAGGATATTGAATCGTTAGTACTAGAGCCACGT
CGGAGCCCTAGTCAAGGAGTATAATGGGGGAGGATGTGTCGGTAGAGGCGTATCTCCGTC
TGAATCAGATTCCTCAGACGAGACTCGTTCGGCTGCACTCAAAGCCACGCGAGCGTATTC
GTCAGTATCGATACTTTTGCAAAAATGAATTGCGTACCTTAATTTTTCTCGTAACACGGA
CTTGCACGAATATCTTGGCATCTTCAGCAAGAAGAAACATGTGTAACTTTCTGGTAAGAA
ATGGTCTGGTGGCTGATATTTGTCGAGAACCTGTAACACAAAATCTCTTTGCCTCGGATC
TTGTGGTGCTCTCGGTAGCCGCGTACGTCCCCAAACAAATCGCAAAAACAGCGCTCGTTC
ACTACCCGATAACTCTTCCATGACTTCCCAAAACCATTGCACTAAGGGTGCGTTCGGTTC
GACACCTTTATAAGTGGCGGAAGCCCGTAACGCATTGACCGGTATGTCAGGTGATCCACA
TACTAGAGTTTCTAATTCCGAGGCGTTGAAGAGCGCGATCAGCGGCGCCGGGATAACTCG
AGACATGCCATCACGGACTGCACGGACTTGTTCGTCGAATTCATGAAGTCTGTAATGCAA
AGCCAACTGCACGTATTCCTCTTTATTGTCAGGAGTAACACGTTTGTGTCGTGTCGATAA
AGGAACTTCATGACCCGCCGCCGATGGTATCGAGAATGGTAACTCAAGATTTTGCAACTC
CTTATTTTGTGGTGTCATGTCTCGAATGCATAGTAAAGCTGGTAAGAAATCTTTGTCTAC
TTCCGCGAGGTCTTGAGGTCGTAATGGTTGTCCGGCTAACTGACGCCACACGCCTTCAGC
CAGTGACAACGACAGCGGTGATCCGGTCCTTATAGCGATACCCATTAGGAGACCAAGGAA
TTTAAAGCAGTGTAAATGTAGCGGTGTATTAGCGGTAGGGTTTAGTAAGAATGCGTCTCT
GGAAGCGCCCGCGTCGCCGCGTCCATTAGGCGTTGCCATCAACAGCGGCAGTGACCCGTT
TTGTAACTCTTCGCACATCTCTGCTATGCTCTCGCTGTAACCTCCACCGCAGTCGTCCAC
ACTTTCACCTACAAACTTGACCTTCCACACCCTATGAGGTAGCGTCAACGCATCGTGCGG
GAACGTAGGCAGCCTGGCTACCATCTGTCCGAAGACGGATCGCATCCCGGCCGCGCCCGC
CAGCCCCGCGCCGCCCTTGCGTGACCGACGCGCCGCTACTCGGGACAACTCCACGACGGG
GCCGTGTTGACGCTCACGTAACATCGTCGCCATTATAGCCTTTCTAAAAGCAGCTTCTTT
GACACTGTAAAACAATAACGTCCTTAGCGCATCGAGCGGTCCCTCCAATATCAACAACGG
TAAATTCGGGCATATTAGTTCGGAAAATTGATGCAGTAAAACCAGTCTATTGCATATGAG
TTGCGTGGGTAGATCTCTGAGTAGATGACACTCGAGTGGGGGAGAGGGCGGCGGCCTGGG
AGCACGCGGCGCTTCCACACAGAGCGCTACGGTGTGAGCGCTGCCGCACGCTACTTTTGT
AACTCTTTTACCCTGTAATGCCATCAGAAGTCTCGGCCTTTGAGCGGCGAGTGTAGTTCC
ATCTCCCAGTTGTCCCTCATCATTATCACCCCACGTATAAACCTCGCCCGTGTCTGTACA
AGCGACACAATGAAGACTACCTGTTGCTATAGACACGATCATCTTTCCTTGCATTCCTGT
GACTCGCATTGGTCGTCTAACGTGTTCGTAGCTTCCGTGTCCAAGTCTATGGTAGTCCCC
TTTGCCCCATGTATAAACACTGCCACATTGACAGAGAGCTACGGAAAATTGTGAGCCACA
CTCCACTTTGATAACACGCAGTCCTTTCAAACAATCTATTCGCATCGGAAGCTTGCAGCC
GTCCGACCCACCACGACCTAATTTCCCATAGTCGCCATCGCCCCAAGACCATACGTTGTC
ATCGTCTGTGATACAAAGCGTTTGAGCGTCGCCGGATCCACAAGCGACATCTATCACTCG
GTACGTTGCCAAAGCTTCAACCAATTTAGGCACGAGTTGGTCCTCAGAATCTCCGTGTCC
CAGTCTCCCGTATCTCCCCTTGCCCCACGTGTAGATGCGTCCCCGTGCGGTGAGGCACGC
CGAGTGTGCGCCCCCGCACGCTATTGATACCACTTCTAAGCCGGAGAGAGCCGTGATCAG
CTTTGGACGGTCGTAGCTCACTCTGTTTCCATGGCCAAGTTTCCCGTCTTCCCCTTCACC
CCAACTATAAACTTCTCCTTCGGCAGATAGAGCTAGACAATGTTTCCCACCAGAGTTACA
CGCAACCTTAGTTATGAACACGTGTTGTATCGATGCTAATAACGTTGGTTGCGACACCGA
ATCTATTCCTCCAATTCCTAATCGTCCTCCAGCGCCATAACCAGTAGCATATATCTTCCC
ATCGGGTGTAACCGCAAAGAGAGTTTGTTCCCCTCCAACAAGTTGCACCGGGTTGAGTAG
TGCGAGCGCGTGGCACGGTGTAGGTGTGCGCACCTTAGCACCCTCGACCCCGCCCAGTTG
TCCGCGATGGTTGTGTCCCCAGCCGTATACGGCACAACCACGGGAACTGCCGCCCCACCA
ACCGGACCAGTCTTCTGGACGCTTATTGACCCAATGCAACAACTGTTCATCATGTTGCTT
CGTGAATTTTGAGTTGTCTTCCCAGCCATAGGGTGATTCGCTAGTTGATTCCTCATTATA
CACACCCAGATCAGTAAGTCTCTTTCTAACATCGGCTAGGAATGGTGTCGGCAATTGTTT
TCTGCGTATAAGAGCATCGGCTGTTCGTATGCAAAGACAGTATCGCTTGAACCAAGCCCA
ACGAGCCGAGTCTGGGCCGGTACACACGCGGGAGTCGATTCGTAAACCACACGCCAACCA
GGCCAGTTCCTTCATGTAATGCGTGTGCATGAGATGCGAGCCGGTCCTGA
(4070 bp)

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