SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp25716_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		Aprataxin_[Operophtera_brumata]
Ontology
GO:0000012 P single strand break repair
GO:0000398 P mRNA splicing, via spliceosome
GO:0003677 F DNA binding
GO:0003684 F damaged DNA binding
GO:0003824 F catalytic activity
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0016787 F hydrolase activity
GO:0033699 F DNA 5'-adenosine monophosphate hydrolase activity
GO:0046872 F metal ion binding
GO:0071011 C precatalytic spliceosome
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:1.72 TPM:1.45
ORF EntryO_TrvaMG10074_5prime_partial:A_TrvaMG_comp25716_c0_seq2
Sequence
(Nucleotide)
ATTTAGTGCAATTTTTATAGAAATGTCTATTTTAATGTGGTGGTGATATCTATTACTGAT
GATTTAATAAATGACTTTTTAAATCAGGCATGTTTTTTGGTATAAATGAACATTGATTGC
ATTGCAGTGGAGTTTTCATTAGTGAGTTATGTGTATCTGATGACATCCTTTTTATACTGC
CAGCTTGTTTTAATTCTTTGAGTAAATCACTATAAGGAATGAAAAAGCTTGTAGTAAAGC
TGTTCCAATGCACTTTTGTTTTAAGACAGGAAGATATCATATCTTTACTAATAATGTGCA
TATGCATTCTCTGCATACTGGGTATTGCGTGAAATCCAGCTCTAAGTTCTAATTCAGTTT
CTTCCTCTATTTCTTTAAATATTTTTCCAAATTCTTCTAACAAACCAACGTGAGATTTGT
TTAGTTTAAAAATACTAGTGATTTCTTCGTTCGGCAATACAAGGTAGTGGATTTTAGCTT
TTGGATACTTATCTTTGATAACAACAATATTTTCTTTACTTTTTATTATACTCTCAGGAT
CTTTCATTGATTCAACAAGTCCTAAAGACCAATGTTTAGACTTTTTTGAAGGTATGCTGG
ATGAGATCATGTTTTGTCTTTTATTCATAACTGAAG
(636 bp)

- SilkBase 1999-2023 -