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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp25701_c0_seq4
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_plasma_membrane_calcium-transporting_ATPase_2_isoform_X3_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0005388 F P-type calcium transporter activity
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0006874 P cellular calcium ion homeostasis
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0030165 F PDZ domain binding
GO:0034220 P ion transmembrane transport
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0070588 P calcium ion transmembrane transport
GO:1903561 C extracellular vesicle
GO:1903779 P regulation of cardiac conduction
Transcript
Level		FPKM:14.98 TPM:12.61
ORF EntryO_TrvaMG10031_complete:A_TrvaMG_comp25701_c0_seq4
Sequence
(Nucleotide)
GTTAAAACATGAGTTTCAGGACTATTCGAAGCAATTTATATTTATCTATTTATTTTTTAC
GAATAAATAAAAAAACTAATCTAGTTTTGGTGTAGTAGTGGAGATGATTATAATATATAT
TATTTATGCCTTTTTATATTTAATATTCAAATGCTTTTCATTAATACAATAGTGTTAAGT
GGCGTACATTAATTATGACAAAATAACTCAAATTAATAAATTAATTCGGCTACGAAAAAT
CGTTTTTGGAAATCCGATAATACAAGTAATAATTGACAACTATAATGTTAATAAAACAAA
TTATTATCGGAGTTCCCCACCGTAACTACGTACTTAAAATATATGTTAAAATTAATAAAA
AAAGTACAAATTGTGCATACTCACAGACGTATGTATACATGCATGTAACACTGTAACATT
AAGGCATGATCACATCTTCAAATGCCAAGCGGTAAACATCTCAAATAACTAAATGAAAAC
ATTAAATCAATCAAAAAACAGAATTTACGTAAATTATATTCAAATAATGATTCTCGTTAA
GTCGTTCGAGTGAGTACTTACAAACTAAGTGCAGCCGCCATTTTGTGTCTAGTCGTGTGA
CAAGATGGCGGCTGGTGACGTCACTAGGCGCGGTGCGGGCGTGCTCTACCGCGGCCACGT
GACCGCGTCACCTGTACTATATACTTACAAAGTACTCCCTATGCGAGTCAGACCTAAACT
TACCGTCAACATCTGAAATAGAGCGATTGTCTCTAAGAAAGATGGCGGCCCCCACCAAAC
GTAACGAAAGAAAATGCTACACTAGTTTTGTTTAACTTTTATTTCAATATGTAAATATTT
GTTATTTTTCATTTAACAATTCGACAAAAAAATTAATTCTATTCGTTAACTTTTAAAACT
TTTTATTAATAAAGCGTAAACAGTGTTATCATATTCATATTAAACTTTAGGAGACGTCAA
AGTGACACGTAATATTCGAGCAGGTATAAACATTTGTACAGTCGAAGGCATAAATAACTA
TTCCGTACGTTCCACAAGTGTATCAGAAACGGGCAATGGTCCCAAAATTTACTATGAAAC
AAAACACGCAAGCTGCCGATAAACTACGGGACGAGTACGCCGCGGGGGTGGGGGTGGGGC
GGGGGGCGCGCGCGGGACGCGGCTAGAAGATGGTGGTCTCGGTGCGCGGCTCGTCGGCGT
CGATGTAGGCGATGTCGGGCGAGGCGACGGGCGCGCGCAGCCGGGAGCGCAGCCCCGCCG
CCGAGTGCGCCGACAGCCGCTCCTCCAGGTCCTCCAGCGTCGACTTGAAGGCGCGCACCA
CCCGCAGCTGCGTCTGCAACCTCGTGAGTCCCCGGATCCAGAGTATCTGTCCGGCGCGCG
GCTTCTTGTCCAGCTCCGACTCGTAGTCCGGCGCCGGCGCGTGCGCGGGGCCCGGCTGTC
GACCCCATGAGAGAGTCTTAGGTATCTTCCTGGTGGGCAGCGTGGTGACCAGCTGTCCCC
ACACCAGGGTCCCGGCTCCGAAGAACAGGCACCACAGCCACTGGTCTATCGTGAGGCCGG
CCGTGCTGAACGCCATGCCGCCAAACTGGATAATGATCACCTGTGACGCCGCAGTCCCGA
TCCATATGGAGTAGAAGATGGGGTTGGTGAAGAGTCCCTCGAAGACGTTCCTCTGTCCGT
GTATCTTGCGCGCGTTGATCTCGTTGAAGAGCGTCATCATGACGAAGGTGTTGAAGATGA
TGGTGAAGTGCTGCGTGGGCTCCGAGCCGAGCGGCTGGAAGCGGCCTGACGGGATGTTCA
GCATCTTGTCGCCGACAAAGAGCAGCATGAATATGACGAAGAGCTGGTAGATGGCCTGTC
CGAGGATGTTCTTCATCATGGTGCGCGAGATGAGCGGCTTGGTGCGTCCGTAGGGCTTGC
GCTGCAGCAGGTCGGGGGTGGGCATCTCCGTGGCCAGCGCCAGCGACGCCAGCGTGTCCA
TGATCAGGTTCACCCACAGCATCTGGACCGCTTTGAGCGGGCTGTCCTGTATAGCGCAGG
CCCCGATGAAGGCCACGATGACGGCCACGATGTTGACGGTGAGCTGGAACTGCAGGAACT
TGGCGATGGAGTCGTACACGTTGCGGCCCCACATCACCGCCTTCACTATCGACGAGAAGT
TGTCGTCCGTCAGGATGATGTCTGAAGCTTCCTTGGCCACGTCCGTTCCGGCTATACCCA
TAGCAAACCCGACATCAGCCTTCTTGAGCGCGGGTCCGTCGTTGGTCCCGTCCCCTGTGA
CGGCGACCACCTCGCGCGTGTCGAACGCCTTGGACTCGATCATGCCCTTGACGAGCGTGT
ACTTGTCTGTGGGCGAGGAGCGCGCCAGCACCCTGAGGGCTGGCCACACCTTGTCCACTA
GTTGCTGTTGAACCTCTCCGTTGGCGTCCCTGATGCGTCGGTTGAACTCCTTGCCCTCGA
GCACGAGGAAGTCGTCAGTGGGTTTGAGGATGCCGCACTTCATGGCGATGGAGCGCGCCG
TGTTCACGTTGTCTCCCGTCACCATCCTCACCGTGATGCCGGCCTTCTGACACTTGCGGA
TGGCTTCTGGTACCTCGGGCCTGACTGGATCTTCGATTCCCACAACACAGAGGCAAGTCA
AGTTATTCACGATATTGTCTTCGTCATCCCAATTCGGTTCCTGGTCTATATGCACCTGGT
TGATGTCCGCCTTGCCGGGCACGAAGTCCCTGTAGGCGACGGAGATGGTGCGGAGTCCGT
CGCAGGCCATGGGCTCGATGACCTGCCTCACGAGGCGCTCCTGCATGTCGCGCGTGAACT
TCTCCAGGCGACCCTCGTGACCGTAGATGAACGCGCATTTTTTAAGCACGATTTCGGACG
CTCCCTTCGTGTACAGGCGGTACCCTCCGTTGTGCGGGATGACGGTGGACATGCTCTTCC
GCACCGAGTTGAAGGTGTAGACGCGCGTGAAGGACTCCTCGGGGTGACTCTCGCGGACCG
CCTCGTAGCTCTGGCCGAGCGCCAGCACGAACCCGAGGAGGGCGCACTCTGTCTTGTTGC
CCACTTGGATTGTAGGCGCGTTTGGGTCCTGTGATGGCATGATCCTGGAGGTGAAGGCGG
AGTTGAGCGAGATGCCCTGCAGCAGCAGGTCGGCGACGGGCGCGGGTATGTCGCGGTAGT
GGGGGGTGACCTTGCAGAGCTTCTCGCAGATGTAGGACTGCACGACGGTCATCCTGTTGG
TGGTGAGGGTGCCGGTCTTGTCGGAGCAGATGGCGGTGGCGTTGCCCATGGTCTCGCAGG
CGTCCAGGTGACGCACAAGGTTGTTGTCTTTCATCATTTTCTTGACAGAGTAGGCGAGAG
AAAGTGTGACGGCAAGCGGCAAGCCCTCAGGAACAGCTACCACCAGCACCGTGACTCCGA
TGATGAGGTGCTTCACGAGGTTGTTGATGTAGGTCGCCTTCCACGGCTCGCCCTTGATGG
CGAAGGTGCGCACGCAGAACTGTATCACCAGGATGATCACCGTCAGGACGGCTATCGTCG
ACCCGGCGTAACCGATCTGTATAGCCAGCTTGGTGAGCTTGGCCTGCAGCACCGACTTCT
CCTTCTTGTGTTGCGGTTCGGGCGGCGGTTTGTCTGCGGGCGGCGCCACGTGGTTGTCGT
CGGGCCGGCTCGCGTGGTTGACGCCGCCATCTTCGTCGCCTTTTTTCTTCTGTTTGATTT
CTTTCTCTTGTTTATCGACGGCAGCTCCGAGAAGCGTGAAGATGATACCGGCTTGAGAAT
TCACACCTACGGCCGTCACTAACATTTTACCAGAACCTTCCATAACGTGTGTACCGGATA
GCACCATGGGATCAAACGTTTCACCCTTCTTGACATGGTCCGATTCTCCCGTCAGAGACG
ATTCGTCAATCTTAAGATCATTGCTCTGCAGTAGTATACCGTCAGCGGGCAGCAGATCAC
CGTACTTGATCTGACATATGTCGCCGACCACTATCTCGCTTATAGGCACCTGTTTAACCT
CCGTGCCGCGGATCACGGCAAATTTGTGTTCGCCTTCTATCCGAGACTGTAGACCTCTGA
ATTGCCGTTCTTTCGTGTAATCGTTAAACGCTGTTACTATGACGACGACTATAACAGATA
TTAAGATAGCTAGACCCTCGATCCATTGGTAGTGGCCCTCTTCTTCATCCAGATGCGCTT
TATCGTTGGGGTCATCCGCGGGCTTATAAAAACTCAATCCTAATGAAACGACAGCAGCAA
CTTCTAGAATAATAAGAGTGACGTCCTGAAGCGCCTCCCATACTAGCGTCAAGAATGTCT
TCGGTGGCTTCGGAGGGATCAGGTTTGAACCGAACACTTCCCGCCGGTGCTGGAGATCGG
CTTTCGAACCGCTAAGACCATCTGTGGGCGATGTGTAGAGTTTCTTGCATATTTCCTGAG
GTCCACCAAGCGCGTTGATTTTGGCCATGCCCTCCGCGCCGCGAGTTTCCATCAGCTCTC
GCAGCTGCCGTAGGGAGACGCCATATTGCGCCGGCCTTCCTTCCACGGTGGCCATGGTGC
CGGGCCCGCGGCCGCCGCCCGCACCAAGCCCGACAACCCTCTAGATCACGAGTGCGTGTC
GCACCCGTTTTTCCGCCTCGGCGTATGGCTCCCTATTATGCTGCAGGTTGCGACCTCAGT
CGTGACCAGCAGCTGCGAGATACCTCCGAAAACGAACAATGCAGAAAAGAAAAACCACAA
AAAATTAGGCACTCCAAGCCAAGTACACGAGCTCAGCCACTCCACAGCCGGCGTCAAATA
ATTCACAGAAAGACTAGTCGTACACTTGAAATAAATAGAAAATACACAGATTGCACTAAC
TTAAACCTATGATTTTCACGTTAATTATTTCTAATAAACTTTAACGAAAACCGCGCCAAA
TGTCAAACTTAAAAACTACGAGCACCAACTCATCACGCGACCTCACGTACCGTGCCCGCG
ATCTGACTGACGAATAGTGTCGAATAGACAGAAGAGGGCACCACACGCGAACGATGAACG
ATATCCACGCGACCCATGCACTACGCGACTTTCGACTAATCGCTATGGCGCGGTTCTG
(5098 bp)

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