SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp25701_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_plasma_membrane_calcium-transporting_ATPase_2_isoform_X7_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0005388 F P-type calcium transporter activity
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0006874 P cellular calcium ion homeostasis
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0030165 F PDZ domain binding
GO:0034220 P ion transmembrane transport
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0070588 P calcium ion transmembrane transport
GO:1903561 C extracellular vesicle
GO:1903779 P regulation of cardiac conduction
Transcript
Level		FPKM:5.65 TPM:4.76
ORF EntryO_TrvaMG10024_complete:A_TrvaMG_comp25701_c0_seq2
Sequence
(Nucleotide)
GTTTTCTTATCCAAATAAAAATTCAAAATTATTTTTGTTGTAACTTTGAAACGTTTCATA
TTTTCCGGACATTTTTGTATCAAAATGAAAAATAAAATGTGTCTATTACCAAGTGAACCA
GCGGAGCTATGACGTCATAATGGGATATATATTCAGTAATATATAATTTAAAGTATATAG
TAAAGTTTTAATAAATGGAAATTATCGACAACTTAACGTTTAGGATGCCCATGATTGCCA
GTGGCCTGTAGACTTTAGAAATTGTCATCAAACATCTTAAATACTGTCCTAACGTAATCT
ATCAGTCTTATATACCACAGCCGAGGTTGGCAACACTGAGCGGCCAGGGTTGCCAGTGAA
AGCACTGTATTTCATTGCACATAGAAAGCCAAATATTGACAATACAATGCTTTCAATAAA
ATGCAGAAACGAGTGATGCCTGGTCACTCTGTTGGTGCATCTTATTATTATTGCCCAGAG
ACGCTGTCCCACATCGACCCGAGGGATTGTCACACAACAGCTGGTCTTGATGCAATATGA
TGCATATTGTAACAAAACCAGTCATCTAAAACGGTTTACCGACATTGAAACCACATCTTC
CCACTATATGATAGGGCGGTTGACTGTTTTGTAAGAATAAATTAAAAGTTAAAGTACTGT
TAAAAAGCAAATTATTTTACTAAACATGTATGTATTGAATTTTACTTCAGGAAGTTTATT
TTGAAACAGTTGTGTTATTATTACAGAATGAGTTGAAAAAATTATGAATTTGGTCTAACG
TTTTGGACTTATTTGGTCTTAAATGGCTTTTAAAATATTTATGTTGTAACTTAATTTAAA
TATAAATGCGTTCGTTTTTATGTCAAAAAACGTTATCACAGTTAAATATCGGGAGCTAAT
AACACTACCGCGAATACTAGATTACGAGCTGCATTTTTAGAAACTACACTAGTAATACTA
TGTCGTATTGTCTATGTGGCGACGCGAATAAAAACATACGAAAATGTTGAGTGTGCAATA
TATATTTTTATAGTGTCTGCGTGGGTCGCTACAAGTGCAGTCAACCGCCCCACATTCCCC
TAGCCGCGCGGTATTCCCCTGCTCTAGGGGCTGTGAGTTTACCTGCGTCTGCAACCTCGT
GAGTCCCCGGATCCAGAGTATCTGTCCGGCGCGCGGCTTCTTGTCCAGCTCCGACTCGTA
GTCCGGCGCCGGCGCGTGCGCGGGGCCCGGCTGTCGACCCCATGAGAGAGTCTTAGGTAT
CTTCCTGGTGGGCAGCGTGGTGACCAGCTGTCCCCACACCAGGGTCCCGGCTCCGAAGAA
CAGGCACCACAGCCACTGGTCTATCGTGAGGCCGGCCGTGCTGAACGCCATGCCGCCAAA
CTGGATAATGATCACCTGTGACGCCGCAGTCCCGATCCATATGGAGTAGAAGATGGGGTT
GGTGAAGAGTCCCTCGAAGACGTTCCTCTGTCCGTGTATCTTGCGCGCGTTGATCTCGTT
GAAGAGCGTCATCATGACGAAGGTGTTGAAGATGATGGTGAAGTGCTGCGTGGGCTCCGA
GCCGAGCGGCTGGAAGCGGCCTGACGGGATGTTCAGCATCTTGTCGCCGACAAAGAGCAG
CATGAATATGACGAAGAGCTGGTAGATGGCCTGTCCGAGGATGTTCTTCATCATGGTGCG
CGAGATGAGCGGCTTGGTGCGTCCGTAGGGCTTGCGCTGCAGCAGGTCGGGGGTGGGCAT
CTCCGTGGCCAGCGCCAGCGACGCCAGCGTGTCCATGATCAGGTTCACCCACAGCATCTG
GACCGCTTTGAGCGGGCTGTCCTGTATAGCGCAGGCCCCGATGAAGGCCACGATGACGGC
CACGATGTTGACGGTGAGCTGGAACTGCAGGAACTTGGCGATGGAGTCGTACACGTTGCG
GCCCCACATCACCGCCTTCACTATCGACGAGAAGTTGTCGTCCGTCAGGATGATGTCTGA
AGCTTCCTTGGCCACGTCCGTTCCGGCTATACCCATAGCAAACCCGACATCAGCCTTCTT
GAGCGCGGGTCCGTCGTTGGTCCCGTCCCCTGTGACGGCGACCACCTCGCGCGTGTCGAA
CGCCTTGGACTCGATCATGCCCTTGACGAGCGTGTACTTGTCTGTGGGCGAGGAGCGCGC
CAGCACCCTGAGGGCTGGCCACACCTTGTCCACTAGTTGCTGTTGAACCTCTCCGTTGGC
GTCCCTGATGCGTCGGTTGAACTCCTTGCCCTCGAGCACGAGGAAGTCGTCAGTGGGTTT
GAGGATGCCGCACTTCATGGCGATGGAGCGCGCCGTGTTCACGTTGTCTCCCGTCACCAT
CCTCACCGTGATGCCGGCCTTCTGACACTTGCGGATGGCTTCTGGTACCTCGGGCCTGAC
TGGATCTTCGATTCCCACAACACAGAGGCAAGTCAAGTTATTCACGATATTGTCTTCGTC
ATCCCAATTCGGTTCCTGGTCTATATGCACCTGGTTGATGTCCGCCTTGCCGGGCACGAA
GTCCCTGTAGGCGACGGAGATGGTGCGGAGTCCGTCGCAGGCCATGGGCTCGATGACCTG
CCTCACGAGGCGCTCCTGCATGTCGCGCGTGAACTTCTCCAGGCGACCCTCGTGACCGTA
GATGAACGCGCATTTTTTAAGCACGATTTCGGACGCTCCCTTCGTGTACAGGCGGTACCC
TCCGTTGTGCGGGATGACGGTGGACATGCTCTTCCGCACCGAGTTGAAGGTGTAGACGCG
CGTGAAGGACTCCTCGGGGTGACTCTCGCGGACCGCCTCGTAGCTCTGGCCGAGCGCCAG
CACGAACCCGAGGAGGGCGCACTCTGTCTTGTTGCCCACTTGGATTGTAGGCGCGTTTGG
GTCCTGTGATGGCATGATCCTGGAGGTGAAGGCGGAGTTGAGCGAGATGCCCTGCAGCAG
CAGGTCGGCGACGGGCGCGGGTATGTCGCGGTAGTGGGGGGTGACCTTGCAGAGCTTCTC
GCAGATGTAGGACTGCACGACGGTCATCCTGTTGGTGGTGAGGGTGCCGGTCTTGTCGGA
GCAGATGGCGGTGGCGTTGCCCATGGTCTCGCAGGCGTCCAGGTGACGCACAAGGTTGTT
GTCTTTCATCATTTTCTTGACAGAGTAGGCGAGAGAAAGTGTGACGGCAAGCGGCAAGCC
CTCAGGAACAGCTACCACCAGCACCGTGACTCCGATGATGAGGTGCTTCACGAGGTTGTT
GATGTAGGTCGCCTTCCACGGCTCGCCCTTGATGGCGAAGGTGCGCACGCAGAACTGTAT
CACCAGGATGATCACCGTCAGGACGGCTATCGTCGACCCGGCGTAACCGATCTGTATAGC
CAGCTTGGTGAGCTTGGCCTGCAGCACCGACTTCTCCTTCTTGTGTTGCGGTTCGGGCGG
CGGTTTGTCTGCGGGCGGCGCCACGTGGTTGTCGTCGGGCCGGCTCGCGTGGTTGACGCC
GCCATCTTCGTCGCCTTTTTTCTTCTGTTTGATTTCTTTCTCTTGTTTATCGACGGCAGC
TCCGAGAAGCGTGAAGATGATACCGGCTTGAGAATTCACACCTACGGCCGTCACTAACAT
TTTACCAGAACCTTCCATAACGTGTGTACCGGATAGCACCATGGGATCAAACGTTTCACC
CTTCTTGACATGGTCCGATTCTCCCGTCAGAGACGATTCGTCAATCTTAAGATCATTGCT
CTGCAGTAGTATACCGTCAGCGGGCAGCAGATCACCGTACTTGATCTGACATATGTCGCC
GACCACTATCTCGCTTATAGGCACCTGTTTAACCTCCGTGCCGCGGATCACGGCAAATTT
GTGTTCGCCTTCTATCCGAGACTGTAGACCTCTGAATTGCCGTTCTTTCGTGTAATCGTT
AAACGCTGTTACTATGACGACGACTATAACAGATATTAAGATAGCTAGACCCTCGATCCA
TTGGTAGTGGCCCTCTTCTTCATCCAGATGCGCTTTATCGTTGGGGTCATCCGCGGGCTT
ATAAAAACTCAATCCTAATGAAACGACAGCAGCAACTTCTAGAATAATAAGAGTGACGTC
CTGAAGCGCCTCCCATACTAGCGTCAAGAATGTCTTCGGTGGCTTCGGAGGGATCAGGTT
TGAACCGAACACTTCCCGCCGGTGCTGGAGATCGGCTTTCGAACCGCTAAGACCATCTGT
GGGCGATGTGTAGAGTTTCTTGCATATTTCCTGAGGTCCACCAAGCGCGTTGATTTTGGC
CATGCCCTCCGCGCCGCGAGTTTCCATCAGCTCTCGCAGCTGCCGTAGGGAGACGCCATA
TTGCGCCGGCCTTCCTTCCACGGTGGCCATGGTGCCGGGCCCGCGGCCGCCGCCCGCACC
AAGCCCGACAACCCTCTAGATCACGAGTGCGTGTCGCACCCGTTTTTCCGCCTCGGCGTA
TGGCTCCCTATTATGCTGCAGGTTGCGACCTCAGTCGTGACCAGCAGCTGCGAGATACCT
CCGAAAACGAACAATGCAGAAAAGAAAAACCACAAAAAATTAGGCACTCCAAGCCAAGTA
CACGAGCTCAGCCACTCCACAGCCGGCGTCAAATAATTCACAGAAAGACTAGTCGTACAC
TTGAAATAAATAGAAAATACACAGATTGCACTAACTTAAACCTATGATTTTCACGTTAAT
TATTTCTAATAAACTTTAACGAAAACCGCGCCAAATGTCAAACTTAAAAACTACGAGCAC
CAACTCATCACGCGACCTCACGTACCGTGCCCGCGATCTGACTGACGAATAGTGTCGAAT
AGACAGAAGAGGGCACCACACGCGAACGATGAACGATATCCACGCGACCCATGCACTACG
CGACTTTCGACTAATCGCTATGGCGCGGTTCTG
(4893 bp)

- SilkBase 1999-2023 -