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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp13828_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_pseudouridylate_synthase_7_homolog_[Amyelois_transitella]
Ontology
GO:0001522 P pseudouridine synthesis
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0008033 P tRNA processing
GO:0009451 P RNA modification
GO:0009982 F pseudouridine synthase activity
GO:0016853 F isomerase activity
Transcript
Level		FPKM:3.52 TPM:2.96
ORF EntryO_TrvaMG1802_complete:A_TrvaMG_comp13828_c0_seq1
Sequence
(Nucleotide)
TTACAATATTTTGTATAATAAAATTCTAATATAAATGATACTCCTAGAATTAAATGCTAT
ATTGTAATTTATATTCGCAACTTATGAAGTTGTATTCAATTTTAATATCAAACCTATTTA
AATTTTGTTAAAATTCAACCAAATAGTTTTGAGGTTAGGTGCGTTATTTTGTTTTGAACA
AAAATGAATAGGGGTGGCAGATGGAACCGGAATAAAAGGGGAGGGTTTGATAGAGGCGGT
AGGGGACGTTCAGACCGTGGCTTCGGACGCGGTAACCGACACGACAACCGCGATAACCAA
CCCACAAACCAATGGAAAAGCACTAGAAGGGACTTACCCGATCCAAGAATATCGGAAAAA
GAAATAGGAATTACTGAATACGTCAGCGACCATGAAGGTTTCGCTGGTGTTATTAAATGG
CGATACTCAGATTTCCAAGTCTCGGAAATCAACGAGGAAGGTGTGGTAGCTAAGCTGACA
GACCTAGAACCTCCGACACCCCCCGAAGAAGAGGTTATTGATGACGATGAAAGTCTTCTA
CTAAATAAATACAATTTGGAAATCCTACCGTTGGAGATGTGGAACAAACTCAATGCTTTG
GCTTTGAGTCCGAGTAAAACTACTGATGTTGTTGTGGAAATAGAAGCAGATAATATTTCA
AAGGAGGAAAGGACTAAGATGCACGAAGCTGTGAAGAAAGCCTTTGGTTCAGTTATTGTT
GGCAGTACTGTTAATGTTGACGGAAAAAAGTTTATCAAATTTGAAAGATATAGAAAAGGA
GTGTATGTGGATAATAGAGTGAAGTGGTCGTGGCCGGCCGAGTACGTACATTTTGTACTG
TATAAAGAGAACTGTGACACCATGGAGGCGGCCGCCTTGTTGGCCAGTAGACTTAAAATA
ACTTTGAAGTCATCGATGTTAGGTTACGCGGGCACCAAGGACCGTCGCGCCAAGACCTCG
CAGTGGGCCAGCGCGCGCAAGCTCGACCCACGGAAACTGCACTCCGCCGCTCGGGACCTC
AGGGACATACACATCGGGAACTACAGCTTTAGTCACACACATATTAAACTGGGCATGCTC
AGTGGGAACAGGTTCCGTATAGCGATCCGTGGCGTGAAGGACGCGGCGAGTGCGGAGCGC
GCGTGCTCGCTGGTGTGCGCGCGCGGGTTCCTCAACTACTTCGGGCTGCAGCGGTTCGGC
TCGCACGCACACATGCCCACACACCGCCTCGGGAAGTATCTGCTTCAAGGGAACTATAAG
GAGGCCATTAACGGCATCCTCCACGTCCGCCCGGGTCCGCTAGAGCGCGCCCTCACCCTG
TACGCGCGCGAGGGAGCCCGGGCCGCCTGCGGAGCCCTACGCGGAGCCCCTCCTAACGCG
ACTGAGGTGCGACTGCTGAGGGCACTGGCTGATAGACCTAATGATCTGCAATACGCGCTG
GATAAGGTTCCTCGTAACGTGCGTCTACTGTACGTGCACTCTTACCAGTCGTACATATGG
AATCGAGCCGTCTCGCGTCGCGTCACGCAGCACGGACTCAACCCGGTGGTCGGGGACCTC
GTGTTCGCCACTAAGGCCTTGTACCAACAACAAACACCATTATACGAAGAAATAATAAAC
CAAGATGACCCAGAAGACGCAGAAACAAAAGAAGAACAAACACAAGATGGCGCCGACACA
CAAGATGGCGCCGAAATACAAGATGGCGAACACAACGCTCTCAAATACGCCGTTAAAACA
TTAACTCAAGAAGATATAGACTCAGCTACATATAGTATATTTGATGTAGTGATGCCGCTT
CCGGGAGTCAATGTAGAATTTCCAGCGCATCTAAAAGATTATTATGAAGAATTGGCCAAA
GAAGACGGATTGAGTTTGACGTTGAAAAATAAATCTAAATCGTTCAAGTTATCAGGCGCC
TACCGCGCTATAGCATGCCGTCCTCGCGACGCGCGCTGGACGCACGTGCGGTACAGCGCG
CTGCACGCCGACCTCATCGCGTCCGACTGGGACGAGCTGAAGAACGTATCGCCGGCGCAA
CATGATGAGGAGGGTAAATACCAAGCGTTAATTCTATCAGTGACGCTCCCTTCAAGTTGT
TACGCGACCATGTTGCTGCGAGAGCTCATGAAGACGGACACGTCCGCGCATGCGCAAGCC
TTGCTCTCCCAACAGGCACTCAAGAGGCCCGCCGATGACGATCGCAATGACGATGACGAT
AGCGACGCTAAACATATCAAACTTGATGACGTTTTGTATTAAAAATAAAATGTAATGTTA
AAAAAA
(2286 bp)

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